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  1. Transcript 'Moocul.CG.ELv1_2.S11...'

Transcript Model

Transcript Id

Moocul.CG.ELv1_2.S114935.g13797.01.t

Possible name(s)

HNF4A; HNF4G; RXRA

Location

S114935 [7,789 / 10,056]

Sequences

Amino acid sequence

Length: 231

>Moocul.CG.ELv1_2.S114935.g13797.01.p
MDPGLPPFTMGSMAMSPTYHSQHNIVYPMPRPFIFQGPPGSPGTDELGGAIGNLNIRQDV
PASMSPVHYHQQLTPESLQNSPPEMVNGTVDDRHLHNGETPDNSKSLCSICGDRATGKHY
GANSCDGCKGFFRRSVRKNHQYQCRFSRNCIVNKDKRNQCRYCRLRKCFRAGMKKEAVQN
ERDRIAQPRSTTDDSTSLSVTTLLNADTMSRQEISVLYFIPLVFPVFQLHI

Nucleotide sequence

Length: 696

>Moocul.CG.ELv1_2.S114935.g13797.01.t
ATGGACCCAGGTCTTCCGCCATTTACCATGGGGTCAATGGCTATGTCACCCACCTACCAT
TCACAGCACAACATCGTATACCCAATGCCTCGTCCATTTATATTTCAAGGCCCACCTGGA
TCTCCGGGAACAGATGAACTCGGTGGCGCAATTGGAAATTTGAACATTCGACAAGATGTG
CCAGCATCGATGTCTCCAGTACATTATCATCAACAACTCACACCGGAATCGCTGCAAAAC
TCACCACCGGAGATGGTTAATGGAACGGTGGATGATCGACATTTGCATAACGGTGAAACA
CCAGACAATTCAAAATCATTATGTTCAATTTGCGGTGATCGAGCCACTGGTAAACATTAC
GGAGCAAACAGCTGCGATGGATGCAAAGGATTCTTCAGAAGAAGTGTTCGGAAGAATCAT
CAGTATCAATGCAGATTCAGTAGAAATTGCATCGTTAACAAAGATAAGCGAAACCAATGT
CGTTATTGTCGACTACGCAAGTGTTTTCGAGCCGGAATGAAGAAAGAAGCGGTGCAGAAC
GAACGAGATCGTATTGCGCAACCGCGATCAACCACCGATGACAGCACGTCACTATCGGTT
ACCACGTTGCTTAACGCAGATACAATGTCTCGACAGGAAATATCTGTTTTATATTTTATT
CCTCTCGTGTTTCCTGTTTTTCAACTTCATATATAA

InterProScan

Gene3D
Znf_NHR/GATA (IPR013088) - T[98-204] 2.9E-36
ProSiteProfiles
Znf_hrmn_rcpt (IPR001628) - T[105-180] 21.211
SMART
Znf_hrmn_rcpt (IPR001628) - T[105-176] 4.2E-38
Pfam
Znf_hrmn_rcpt (IPR001628) - T[107-175] 8.9E-30
ProSitePatterns
Znf_hrmn_rcpt (IPR001628) - T[108-134] .
PRINTS
Znf_hrmn_rcpt (IPR001628) - T[108-124] 5.8E-19 - T[124-139] 5.8E-19 - T[157-165] 5.8E-19 - T[165-173] 5.8E-19

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RXRA_HUMAN 35.349 % 125 8.82E-34
HNF4A_HUMAN 76.636 % 187 7.64E-57
HNF4G_HUMAN 74.576 % 181 2.62E-55