- Transcript 'Phfumi.CG.MTP2014.S2...' >
- Transcript 'Moocul.CG.ELv1_2.S11...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S118792.g14053.01.t
Possible name(s)
PAX3; PAX4; PAX6
Gene model
Location
S118792 [16,725 / 23,136]
Amino acid sequence
Length: 464
>Moocul.CG.ELv1_2.S118792.g14053.01.p
MTSNPLYHHQTQIGNHHLSHHYPANSYSSSVALCLTRDTLPHKGHSGINQLGGMFVNGRP
LPDTTRQRIVELAHNGARPCDISRILQVSNGCVSKILARYYETGTIRPRAIGGSKPRVAT
PEVVARIALFKQECPSIFAWEIRDRLLSEKICNAENIPSVSSINRVLRNFANDKLNGIEF
NTNMSRTSDWSKENGWYNSSSASKESDESYCSGESKSDDGAKETTEEAQARLQLKRKLQR
NRTSFTQEQVDALEKEFERTHYPDVFARERLAGKIDLPEARIQVWFSNRRAKWRREEKMR
NQRNNGRVPTIGHKTDPSALHSYIGQQHYDVQTHSHSSQCSVSGSLVSIHDSYDSSPSTF
PLAGHHHGNAIEQSSCDLYQYPSYAYNGNENASPPSIATPHDQITYGGHRLTHSNSLHHE
PSVQQSEAYYPHHQNIHSDVQQVPGSIIQSEGLHHNPSSLYWSH
Nucleotide sequence
Length: 1,522
>Moocul.CG.ELv1_2.S118792.g14053.01.t
TTCAGATAAAACATAAAATAAAATGACCAGCAATCCACTTTATCATCATCAAACACAGAT
TGGCAATCATCATTTGAGTCATCATTATCCTGCAAACTCCTACTCTTCTTCAGTTGCACT
TTGCCTCACACGAGACACTCTGCCCCATAAAGGTCACAGTGGCATCAACCAACTCGGAGG
AATGTTTGTGAATGGCAGACCACTGCCTGACACAACCAGACAACGTATTGTGGAGTTGGC
ACACAATGGAGCTCGTCCTTGTGATATTTCAAGAATATTACAAGTTTCCAACGGATGTGT
CAGCAAAATACTGGCAAGATATTATGAAACTGGAACCATTCGTCCACGAGCAATTGGTGG
AAGCAAACCAAGGGTCGCCACACCGGAAGTGGTGGCGCGTATTGCTCTTTTCAAACAAGA
ATGCCCGAGTATATTTGCATGGGAAATACGAGATAGACTTCTTAGTGAAAAAATTTGCAA
TGCTGAAAATATTCCAAGTGTGTCTTCCATTAACCGCGTGCTTCGTAACTTCGCCAACGA
CAAGTTGAACGGAATCGAATTTAATACTAATATGTCTCGAACTTCTGATTGGTCGAAAGA
GAATGGGTGGTACAACAGTAGCTCCGCCTCAAAAGAAAGTGACGAATCTTATTGCTCCGG
GGAAAGTAAAAGTGACGATGGAGCCAAGGAGACAACCGAAGAAGCCCAAGCTCGTCTTCA
ACTGAAAAGAAAACTTCAAAGAAATCGAACATCTTTTACTCAAGAACAAGTGGATGCACT
TGAGAAAGAATTTGAGAGAACACATTATCCAGATGTGTTTGCGCGCGAGAGATTGGCGGG
TAAAATCGACCTCCCAGAAGCCAGAATACAGGTTTGGTTTTCCAATCGACGAGCAAAATG
GCGAAGGGAGGAAAAAATGCGGAACCAAAGAAACAATGGCCGCGTACCGACGATTGGCCA
TAAAACCGATCCGTCAGCGTTACATTCGTATATCGGACAGCAACATTACGATGTTCAAAC
ACATTCGCATTCCTCTCAATGCTCAGTGTCGGGAAGTCTTGTATCGATTCACGATTCATA
TGATTCGAGTCCTTCTACGTTTCCATTGGCTGGACACCATCACGGAAATGCAATAGAACA
ATCCTCATGTGACTTGTACCAATACCCATCATATGCTTACAATGGAAATGAAAACGCATC
ACCTCCATCAATAGCGACACCTCACGACCAGATTACATACGGAGGCCATCGTTTGACACA
CAGTAACTCGCTTCATCATGAACCATCTGTGCAGCAATCTGAAGCATATTACCCTCATCA
TCAAAACATCCATTCAGACGTGCAGCAAGTACCTGGTTCGATCATCCAAAGCGAAGGACT
TCATCACAACCCAAGTTCATTGTACTGGTCCCATTAAAGTATTCATGTCCAACTTGACTA
ACACTGCCCAGTTAACAATATTTGTATTAACCAAAGATTTATTTACAATCTGTCATTAAT
GTCGCATGGCTTTCAATAGAAT
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[37-112] 4.8E-41 - T[113-176] 3.9E-31 |
| ProSiteProfiles |
Paired_dom (IPR001523) - T[44-170] 62.406 |
| SMART |
Paired_dom (IPR001523) - T[44-168] 1.5E-87 |
| CDD |
Paired_dom (IPR001523) - T[44-171] 5.5255E-80 |
| Pfam |
Paired_dom (IPR001523) - T[44-168] 1.3E-66 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[46-169] 1.97E-37 - T[231-297] 1.2E-22 |
| PRINTS |
Paired_dom (IPR001523) - T[48-63] 8.1E-42 - T[66-84] 8.1E-42 - T[86-103] 8.1E-42 - T[104-121] 8.1E-42 |
| ProSitePatterns |
Paired_dom (IPR001523) - T[78-94] . |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[236-296] 19.856 |
| SMART |
Homeobox_dom (IPR001356) - T[238-300] 7.7E-26 |
| CDD |
Homeobox_dom (IPR001356) - T[240-297] 2.4338E-23 |
| Pfam |
Homeobox_dom (IPR001356) - T[240-295] 4.8E-22 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[271-294] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PAX3_HUMAN | 46.043 % | 255 | 1.01E-79 |
| PAX6_HUMAN | 71.956 % | 401 | 1.68E-137 |
| PAX4_HUMAN | 51.362 % | 248 | 7.31E-79 |