- Transcript 'Phfumi.CG.MTP2014.S5...' >
- Transcript 'Moocul.CG.ELv1_2.S97...' >
- Transcript 'KH2012:KH.C4.487.v1....' >
- Transcript 'Moocul.CG.ELv1_2.S12...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S123290.g14407.01.t
Possible name(s)
ERCC2; RTEL1; RTEL1-TNFRSF6B
Gene model
Location
S123290 [1,562 / 5,337]
Amino acid sequence
Length: 1,107
>Moocul.CG.ELv1_2.S123290.g14407.01.p
MPTLTLLGVEVEFPFTPYQLQIDYMTKVIEALQTKQHALLESPTGTGKTLCLLCASLAWR
KSELKKYAPAATAVGPGPVEDEPTLPFGWGNSGGTDNNQMPPQAPNIAKIIYSSRTHSQL
TQAVAELKNTAYAKEVKISVLGSRDQLCVHPEVSKQTNNTAKVHMCRNKVNKHMCHFYNN
IDNAKNGQGKIITNAVMDIEDLVNMGKKQNICPYYHARELSKEPDCDIIFTPYNYLIDKK
SRRANKLDIEGNFIIFDEAHNVEKVCEESASFELSSLDLAQCVKEVGDLLQAVKKVKDTG
IMPEGHEAGESASLSEFDEEALAVLKVLFVTLEEELDKFTLTSEGCTKNGDFVFEFFEKV
NLTFKTYEAIVDILDKITSYLSTLSNQFQIRGVGLQKFSETVKIIFSSHELENVPAALMD
MQQERVKQQISMYYRVHVMEVEKRPASSPKKQNMWLSTKSTESKKSRTLSYWCFSPGYAM
RDMISSGVRNMLLTSGTLCPLQSFMSELQINFPITLQNPHIIGNHQVFVSVLPMARNKVR
LESTYKSRSDVNVVRELGASLIDIARCSPNGMLVFFPSYGAMNGYLKAWQDMDILRQLDM
VKPVTQEPKTKNELKEAMDKFYNDAKTTKGGTMLAVCRGKVSEGLDFANENGRTVVLLGP
PFPPVKDPRVKLKMRILDAMKQTQSMPNLIRGQEWYKLQALRAVNQAIGRVIRHRFDYGA
IVFLDYRYQGKEYNNEFPKWIQGRVNVFNDFDQLRNSLFKPLHCLQFLHRFDYGAIVFLD
YRYQGKEYNNEFPKWIQGRVNVFNDFDQAMRRLKSFFCSAVQKEAFRVANLKQADATKTK
LSTTLKETSTTKSTNTASTSAKKPQSNVLSIYGGMKQKENALNRPKTEHWIVRKNNDSED
HIPPSFENTQFQKMIANQCPTDKKCQKSLKVKSESLFSALQDDGQQLPKYGFMNSPVSQT
KPNNGVSTSINIMMRKRKMDEQRGVTKKLKLIPNSFAKPLVSSEDIRLIPENKSENEDTR
LIPENKPEVKSKMFTGDKNKRNSQPLGEKIFPQSSAKEENIQSYTTLEYRNKVKETLSNE
DYIKFKKASSEYTKSSDLEKLVSQLKH
Nucleotide sequence
Length: 3,321
>Moocul.CG.ELv1_2.S123290.g14407.01.t
ATGCCGACTTTGACCCTTTTGGGAGTCGAAGTCGAATTTCCCTTCACTCCATACCAACTA
CAAATCGACTACATGACAAAAGTAATTGAGGCTTTGCAAACCAAACAGCATGCTTTACTC
GAGTCACCAACAGGCACTGGAAAAACTTTGTGTTTGCTGTGTGCAAGTCTTGCCTGGCGA
AAAAGTGAACTAAAAAAATATGCACCAGCAGCCACAGCTGTGGGACCAGGTCCAGTTGAA
GATGAGCCGACATTGCCTTTTGGTTGGGGAAACTCTGGCGGAACGGATAACAATCAAATG
CCACCCCAAGCTCCAAATATTGCTAAAATAATTTATTCGTCTCGGACACACAGTCAATTA
ACACAGGCTGTGGCAGAACTAAAAAATACGGCATATGCAAAAGAAGTAAAAATAAGTGTT
TTGGGATCACGAGATCAGCTCTGTGTCCATCCTGAAGTATCCAAACAAACAAACAACACA
GCTAAAGTACACATGTGCAGAAATAAGGTAAATAAACATATGTGTCATTTTTACAATAAT
ATTGACAATGCGAAAAATGGACAAGGTAAAATAATAACGAATGCTGTAATGGATATAGAG
GATTTGGTAAACATGGGAAAGAAACAAAACATCTGCCCTTACTACCATGCTAGAGAACTG
TCAAAAGAACCTGATTGTGACATAATTTTCACACCTTATAATTATTTGATTGACAAAAAA
TCAAGAAGAGCAAACAAACTTGATATTGAAGGCAATTTTATAATATTTGATGAAGCACAT
AATGTTGAAAAAGTTTGCGAAGAATCCGCTTCTTTCGAATTATCTTCTCTTGATCTTGCA
CAATGTGTTAAAGAAGTCGGCGATCTATTGCAAGCTGTAAAAAAAGTGAAAGATACAGGG
ATAATGCCTGAAGGTCATGAGGCAGGTGAATCTGCCTCGTTGAGTGAATTTGATGAAGAA
GCTCTCGCGGTATTAAAGGTTCTATTTGTAACTCTTGAAGAAGAACTTGACAAGTTTACT
TTAACATCAGAGGGATGCACAAAGAATGGGGACTTTGTTTTTGAGTTTTTTGAAAAAGTT
AATTTGACTTTCAAAACATATGAAGCAATTGTGGATATTCTTGATAAAATTACTTCATAT
TTATCTACGCTGAGCAATCAGTTTCAAATTCGAGGAGTTGGACTTCAAAAATTCTCTGAA
ACTGTTAAAATTATTTTCAGTTCACATGAGCTTGAAAATGTTCCAGCTGCGTTAATGGAT
ATGCAACAAGAAAGAGTCAAACAACAAATATCAATGTATTACAGAGTGCATGTCATGGAA
GTTGAGAAACGACCAGCTTCCTCACCCAAGAAGCAAAATATGTGGCTGTCAACAAAATCT
ACTGAAAGTAAAAAATCACGCACACTTAGTTACTGGTGCTTCAGTCCCGGTTATGCGATG
CGTGATATGATTTCTTCTGGTGTTAGAAACATGTTATTGACCAGCGGAACTTTGTGTCCT
CTACAGTCTTTTATGTCTGAGTTGCAAATTAATTTCCCAATTACGTTACAAAATCCCCAC
ATCATTGGGAACCACCAAGTGTTTGTATCTGTGCTGCCAATGGCTCGTAACAAAGTGCGT
CTTGAATCCACCTACAAATCTAGAAGTGATGTAAATGTTGTCCGTGAATTAGGTGCATCC
TTGATAGACATTGCAAGATGTAGTCCAAATGGAATGCTTGTCTTTTTCCCATCTTATGGT
GCCATGAATGGATACTTAAAAGCGTGGCAAGATATGGACATTTTAAGACAGTTGGACATG
GTTAAGCCTGTCACACAGGAACCAAAGACGAAGAATGAGTTAAAAGAAGCGATGGATAAA
TTCTACAATGATGCTAAAACAACAAAGGGTGGAACCATGCTTGCTGTATGTCGTGGAAAA
GTCTCTGAAGGTCTTGATTTTGCAAATGAAAATGGAAGGACTGTGGTTTTGTTAGGACCC
CCATTTCCTCCAGTAAAAGATCCAAGAGTTAAATTAAAAATGAGAATCCTCGATGCTATG
AAACAAACGCAGTCCATGCCTAATTTGATTCGCGGACAAGAATGGTATAAACTACAAGCG
CTGAGGGCTGTAAATCAAGCTATTGGTCGTGTAATTAGGCATCGCTTTGATTATGGTGCG
ATTGTTTTTCTTGATTATCGATATCAAGGAAAAGAATACAACAATGAATTCCCAAAATGG
ATCCAAGGGCGAGTCAATGTTTTCAATGACTTTGATCAGCTACGAAATTCGCTATTTAAA
CCACTGCATTGTCTGCAATTTCTGCATCGCTTTGATTATGGAGCGATTGTTTTTCTTGAT
TATCGATATCAAGGAAAAGAATACAACAATGAATTCCCGAAATGGATCCAAGGGAGAGTC
AATGTTTTCAATGACTTTGATCAGGCCATGAGACGACTGAAGTCTTTTTTCTGTTCTGCT
GTTCAAAAAGAAGCTTTTCGTGTCGCAAATTTAAAGCAAGCCGATGCCACAAAAACCAAA
CTATCTACAACACTTAAAGAAACTTCAACAACAAAATCTACTAACACCGCATCAACATCA
GCCAAGAAACCACAAAGTAATGTTTTATCAATTTATGGTGGGATGAAACAGAAAGAAAAT
GCTTTGAATAGACCAAAGACAGAACATTGGATTGTTCGCAAAAACAATGATTCTGAGGAT
CACATTCCACCATCATTTGAAAACACACAGTTTCAAAAAATGATTGCAAATCAATGCCCA
ACAGATAAAAAATGTCAGAAATCGTTAAAAGTGAAATCTGAAAGCCTTTTTTCTGCTCTC
CAAGATGACGGTCAGCAATTGCCCAAATATGGATTTATGAACTCACCAGTAAGTCAAACA
AAACCCAATAATGGCGTTTCTACTTCGATAAATATTATGATGAGAAAAAGGAAAATGGAC
GAACAGCGAGGAGTTACGAAGAAGCTAAAACTTATTCCTAATTCATTTGCAAAACCACTT
GTTTCCTCAGAAGATATACGATTAATACCTGAAAACAAATCAGAAAATGAAGATACACGA
TTAATACCTGAAAACAAACCAGAAGTCAAATCTAAAATGTTTACAGGCGATAAAAACAAA
CGGAACTCACAACCACTTGGTGAAAAAATATTTCCTCAAAGTTCTGCAAAGGAAGAAAAT
ATACAATCATATACGACCCTTGAATACAGAAATAAAGTTAAAGAAACTTTATCAAATGAA
GATTATATAAAATTCAAAAAGGCATCAAGTGAATACACAAAATCAAGCGATCTTGAAAAA
CTTGTATCCCAATTAAAACAT
| ProSiteProfiles |
Helic_SF1/SF2_ATP-bd_DinG/Rad3 (IPR014013) - T[7-306] 29.043 |
| SMART |
Helicase-like_DEXD_c2 (IPR006554) - T[9-303] 7.7E-50 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[11-66] 1.13E-10 - T[30-62] 7.08E-10 - T[105-128] 7.08E-10 - T[109-147] 1.13E-10 - T[206-280] 7.08E-10 - T[221-262] 1.13E-10 - T[487-501] 7.08E-10 - T[536-724] 7.08E-10 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[11-342] 0.0073 |
| TIGRFAM |
Rad3/Chl1-like (IPR013020) - T[11-747] 4.0E-142 |
| Pfam |
DEAD_2 (IPR010614) - T[112-278] 2.3E-52 |
| Pfam |
ATP-dep_Helicase_C (IPR006555) - T[562-742] 3.0E-51 |
| SMART |
ATP-dep_Helicase_C (IPR006555) - T[579-730] 3.2E-48 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ERCC2_HUMAN | 24.712 % | 215 | 1.82E-58 |
| FANCJ_HUMAN | 36.452 % | 210 | 2.08E-55 |
| RTEL1_HUMAN | 43.455 % | 639 | 0 |