- Transcript 'Moocci.CG.ELv1_2.S64...' >
- Transcript 'KH2012:KH.C1.264.v2....' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Harore.CG.MTP2014.S3...' >
- Transcript 'Moocul.CG.ELv1_2.S12...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S125316.g14628.01.t
Possible name(s)
ABCF1; ABCF2; ABCF3
Gene model
Location
S125316 [22,994 / 30,643]
Amino acid sequence
Length: 655
>Moocul.CG.ELv1_2.S125316.g14628.01.p
MPSEAAKKRAAKKKEKRRPSKAQVQSNGDDAAAAPQATNGLDKDMSKLELSSRSCTGVLA
SHPQSTDVHIHNFSCTFHGQVLFEDTNLELNSGNRYGLIGANGCGKSTMLCCLGHREVPI
PDHIDIFYLDKEMPPSDKTAIESVMDVDEERIKLEAEAERLMHEDPESEHLMDIYERLDE
LDVNTAEVRAARILCGLGFTALMQKKKLSDFSGGWRMRVALARALFVKPYLLLLDEPTNH
LDLDACVWLEEELKNFKHILVLISHSQDFLNGVCTNMITMTQRKLQYYSGNYDAFIRTRS
ELEENQMKRYKWEQEQISHMKEYIARFGHGSAKLARQAQSKEKTLAKMVDKGLTERVKSD
KTLEFYFPECGKLAPPVLMIQNVSFRYNQKTPWIYKDIEFGVDLDTRLALVGPNGAGKST
LLKLIAGELIPSDGLIRRHSHLKIARYHQHLADHLDMELSPLDYMLKCYPEIKEIEQMRK
IIGRYGLTGKQQVTPIKNLSDGQKCRVVFAWLSSQNPHLLLLDEPTNHLDIETIDSLADA
INDFNGGMILVSHDFRLISQVAKNIWVCENSTVTPWNGDIIAYKELLKNKMHKQEKSLAK
GKSADHQIETSPPKSNGSQKAVPKKPSVIQIVRPKKLEEPSNEKSPDVVADYWEA
Nucleotide sequence
Length: 2,251
>Moocul.CG.ELv1_2.S125316.g14628.01.t
ATATTTTGTCTGTTTGTTAGGTGTTAAATCATTGTTTGAACGTTCCGTATACCATTCAGC
ATTGGCTACTTAACCTCTCGAAAACTTGATCTTTTATTTTTTCTGTAATCAAAGTAATAT
TTGGGATGCCTTCAGAAGCAGCAAAAAAGCGAGCAGCTAAAAAGAAGGAAAAGAGAAGAC
CAAGCAAAGCTCAAGTACAATCAAATGGCGATGATGCTGCTGCAGCACCTCAAGCCACAA
ATGGGTTAGACAAAGATATGTCAAAACTGGAATTAAGCTCACGGTCATGTACTGGTGTAC
TGGCATCGCATCCACAGTCTACAGATGTCCATATTCATAATTTCTCTTGTACATTTCATG
GACAGGTTTTATTTGAAGATACAAATCTTGAATTGAATTCTGGAAATCGTTACGGTTTAA
TTGGAGCAAATGGTTGTGGTAAATCGACGATGTTGTGTTGTCTTGGACATCGTGAAGTGC
CGATACCCGATCATATCGACATATTCTACCTTGATAAAGAAATGCCTCCCAGCGATAAAA
CTGCCATTGAATCCGTCATGGATGTTGATGAGGAGAGAATCAAATTGGAAGCAGAAGCCG
AAAGGCTGATGCATGAAGATCCGGAAAGCGAACATTTGATGGACATTTACGAACGTTTGG
ATGAGCTTGACGTTAACACTGCGGAGGTTCGTGCGGCGAGGATACTCTGTGGTCTCGGAT
TCACTGCCCTCATGCAAAAGAAGAAACTTTCGGATTTCTCTGGAGGTTGGAGGATGCGTG
TCGCGCTCGCAAGAGCGTTATTCGTTAAACCGTACCTATTGCTACTCGATGAACCTACAA
ACCACTTGGATCTTGATGCCTGTGTGTGGCTTGAGGAGGAATTGAAGAACTTCAAGCACA
TTCTGGTCCTCATTTCACATTCACAAGATTTTCTGAACGGTGTCTGCACGAACATGATCA
CTATGACTCAGCGTAAATTGCAGTATTATTCGGGTAACTACGATGCGTTCATTCGTACAC
GAAGTGAGTTGGAGGAGAATCAAATGAAGCGTTACAAATGGGAGCAGGAACAAATATCCC
ATATGAAGGAATATATCGCGCGATTCGGCCACGGCAGTGCTAAACTTGCACGACAAGCTC
AAAGCAAAGAAAAAACACTTGCTAAAATGGTGGATAAAGGTTTAACGGAAAGAGTAAAAT
CAGACAAAACACTTGAATTTTACTTTCCGGAATGCGGCAAACTCGCTCCCCCGGTTCTCA
TGATACAAAACGTTAGTTTTCGCTACAACCAAAAAACGCCATGGATTTACAAAGATATTG
AGTTTGGGGTTGATCTTGACACTCGGCTGGCGTTGGTCGGGCCTAACGGAGCCGGCAAAT
CAACATTGTTGAAATTAATTGCAGGAGAGTTGATTCCTTCGGATGGTTTAATTCGGAGGC
ACAGTCATTTGAAGATTGCACGTTACCATCAGCATTTAGCCGATCATCTTGATATGGAGT
TGTCTCCTCTCGACTACATGTTGAAATGTTATCCTGAGATCAAAGAGATTGAGCAGATGA
GAAAAATTATTGGTCGGTATGGTCTTACTGGAAAACAACAGGTCACACCAATCAAAAACT
TATCAGATGGTCAAAAATGTCGTGTTGTGTTTGCATGGTTGTCATCTCAAAATCCTCATC
TCCTTTTACTGGACGAACCGACAAATCATTTGGATATCGAGACAATCGACTCGCTTGCGG
ATGCCATCAATGATTTCAATGGAGGAATGATTCTCGTGTCTCATGACTTCAGACTGATCA
GCCAGGTTGCGAAGAACATATGGGTATGTGAAAATTCTACGGTGACTCCATGGAATGGTG
ATATTATTGCATATAAAGAATTGCTCAAGAATAAAATGCATAAACAGGAGAAAAGCCTTG
CAAAGGGAAAAAGTGCTGATCATCAAATTGAAACATCTCCACCAAAATCGAATGGTTCAC
AGAAAGCCGTTCCAAAGAAACCTTCCGTTATACAAATTGTAAGGCCAAAGAAACTTGAAG
AACCATCAAATGAAAAAAGTCCGGATGTTGTAGCTGATTATTGGGAAGCTTAACGTTATT
TTATAACAGTTATTTTTACTGTAATTAACTGTATAAAGTATTTATTCACATGTCCCCTAC
ACACCTTCTAATAATAGGAACAGAATAATATTTGTAATATGTCATTTTTGGTTTGCACTT
TTGAAGTTCAAATACATAAATATCTTGCGGC
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[60-315] 6.36E-41 - T[359-574] 5.78E-43 |
| ProSiteProfiles |
ABC_transporter-like (IPR003439) - T[68-307] 14.766 - T[378-595] 14.213 |
| Pfam |
ABC_transporter-like (IPR003439) - T[84-239] 6.3E-21 - T[395-527] 2.6E-22 |
| SMART |
AAA+_ATPase (IPR003593) - T[92-291] 6.0E-9 - T[404-572] 2.9E-8 |
| ProSitePatterns |
ABC_transporter_CS (IPR017871) - T[211-225] . |
| Pfam |
ABC_tran_Xtn (IPR032781) - T[279-351] 9.0E-21 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ABCF2_HUMAN | 69.551 % | 864 | 0 |
| ABCF3_HUMAN | 38.436 % | 419 | 1.21E-137 |
| ABCF1_HUMAN | 39.304 % | 373 | 1.1E-118 |