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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S6...'
  2. Transcript 'KH2012:KH.C9.38.v3.A...'
  3. Transcript 'Moocci.CG.ELv1_2.S64...'
  4. Transcript 'KH2012:KH.C1.264.v2....'
  5. Transcript 'Moocul.CG.ELv1_2.S12...'

Transcript Model

Transcript Id

Moocul.CG.ELv1_2.S125316.g14628.01.t

Possible name(s)

ABCF1; ABCF2; ABCF3

Location

S125316 [22,994 / 30,643]

Sequences

Amino acid sequence

Length: 655

>Moocul.CG.ELv1_2.S125316.g14628.01.p
MPSEAAKKRAAKKKEKRRPSKAQVQSNGDDAAAAPQATNGLDKDMSKLELSSRSCTGVLA
SHPQSTDVHIHNFSCTFHGQVLFEDTNLELNSGNRYGLIGANGCGKSTMLCCLGHREVPI
PDHIDIFYLDKEMPPSDKTAIESVMDVDEERIKLEAEAERLMHEDPESEHLMDIYERLDE
LDVNTAEVRAARILCGLGFTALMQKKKLSDFSGGWRMRVALARALFVKPYLLLLDEPTNH
LDLDACVWLEEELKNFKHILVLISHSQDFLNGVCTNMITMTQRKLQYYSGNYDAFIRTRS
ELEENQMKRYKWEQEQISHMKEYIARFGHGSAKLARQAQSKEKTLAKMVDKGLTERVKSD
KTLEFYFPECGKLAPPVLMIQNVSFRYNQKTPWIYKDIEFGVDLDTRLALVGPNGAGKST
LLKLIAGELIPSDGLIRRHSHLKIARYHQHLADHLDMELSPLDYMLKCYPEIKEIEQMRK
IIGRYGLTGKQQVTPIKNLSDGQKCRVVFAWLSSQNPHLLLLDEPTNHLDIETIDSLADA
INDFNGGMILVSHDFRLISQVAKNIWVCENSTVTPWNGDIIAYKELLKNKMHKQEKSLAK
GKSADHQIETSPPKSNGSQKAVPKKPSVIQIVRPKKLEEPSNEKSPDVVADYWEA

Nucleotide sequence

Length: 2,251

>Moocul.CG.ELv1_2.S125316.g14628.01.t
ATATTTTGTCTGTTTGTTAGGTGTTAAATCATTGTTTGAACGTTCCGTATACCATTCAGC
ATTGGCTACTTAACCTCTCGAAAACTTGATCTTTTATTTTTTCTGTAATCAAAGTAATAT
TTGGGATGCCTTCAGAAGCAGCAAAAAAGCGAGCAGCTAAAAAGAAGGAAAAGAGAAGAC
CAAGCAAAGCTCAAGTACAATCAAATGGCGATGATGCTGCTGCAGCACCTCAAGCCACAA
ATGGGTTAGACAAAGATATGTCAAAACTGGAATTAAGCTCACGGTCATGTACTGGTGTAC
TGGCATCGCATCCACAGTCTACAGATGTCCATATTCATAATTTCTCTTGTACATTTCATG
GACAGGTTTTATTTGAAGATACAAATCTTGAATTGAATTCTGGAAATCGTTACGGTTTAA
TTGGAGCAAATGGTTGTGGTAAATCGACGATGTTGTGTTGTCTTGGACATCGTGAAGTGC
CGATACCCGATCATATCGACATATTCTACCTTGATAAAGAAATGCCTCCCAGCGATAAAA
CTGCCATTGAATCCGTCATGGATGTTGATGAGGAGAGAATCAAATTGGAAGCAGAAGCCG
AAAGGCTGATGCATGAAGATCCGGAAAGCGAACATTTGATGGACATTTACGAACGTTTGG
ATGAGCTTGACGTTAACACTGCGGAGGTTCGTGCGGCGAGGATACTCTGTGGTCTCGGAT
TCACTGCCCTCATGCAAAAGAAGAAACTTTCGGATTTCTCTGGAGGTTGGAGGATGCGTG
TCGCGCTCGCAAGAGCGTTATTCGTTAAACCGTACCTATTGCTACTCGATGAACCTACAA
ACCACTTGGATCTTGATGCCTGTGTGTGGCTTGAGGAGGAATTGAAGAACTTCAAGCACA
TTCTGGTCCTCATTTCACATTCACAAGATTTTCTGAACGGTGTCTGCACGAACATGATCA
CTATGACTCAGCGTAAATTGCAGTATTATTCGGGTAACTACGATGCGTTCATTCGTACAC
GAAGTGAGTTGGAGGAGAATCAAATGAAGCGTTACAAATGGGAGCAGGAACAAATATCCC
ATATGAAGGAATATATCGCGCGATTCGGCCACGGCAGTGCTAAACTTGCACGACAAGCTC
AAAGCAAAGAAAAAACACTTGCTAAAATGGTGGATAAAGGTTTAACGGAAAGAGTAAAAT
CAGACAAAACACTTGAATTTTACTTTCCGGAATGCGGCAAACTCGCTCCCCCGGTTCTCA
TGATACAAAACGTTAGTTTTCGCTACAACCAAAAAACGCCATGGATTTACAAAGATATTG
AGTTTGGGGTTGATCTTGACACTCGGCTGGCGTTGGTCGGGCCTAACGGAGCCGGCAAAT
CAACATTGTTGAAATTAATTGCAGGAGAGTTGATTCCTTCGGATGGTTTAATTCGGAGGC
ACAGTCATTTGAAGATTGCACGTTACCATCAGCATTTAGCCGATCATCTTGATATGGAGT
TGTCTCCTCTCGACTACATGTTGAAATGTTATCCTGAGATCAAAGAGATTGAGCAGATGA
GAAAAATTATTGGTCGGTATGGTCTTACTGGAAAACAACAGGTCACACCAATCAAAAACT
TATCAGATGGTCAAAAATGTCGTGTTGTGTTTGCATGGTTGTCATCTCAAAATCCTCATC
TCCTTTTACTGGACGAACCGACAAATCATTTGGATATCGAGACAATCGACTCGCTTGCGG
ATGCCATCAATGATTTCAATGGAGGAATGATTCTCGTGTCTCATGACTTCAGACTGATCA
GCCAGGTTGCGAAGAACATATGGGTATGTGAAAATTCTACGGTGACTCCATGGAATGGTG
ATATTATTGCATATAAAGAATTGCTCAAGAATAAAATGCATAAACAGGAGAAAAGCCTTG
CAAAGGGAAAAAGTGCTGATCATCAAATTGAAACATCTCCACCAAAATCGAATGGTTCAC
AGAAAGCCGTTCCAAAGAAACCTTCCGTTATACAAATTGTAAGGCCAAAGAAACTTGAAG
AACCATCAAATGAAAAAAGTCCGGATGTTGTAGCTGATTATTGGGAAGCTTAACGTTATT
TTATAACAGTTATTTTTACTGTAATTAACTGTATAAAGTATTTATTCACATGTCCCCTAC
ACACCTTCTAATAATAGGAACAGAATAATATTTGTAATATGTCATTTTTGGTTTGCACTT
TTGAAGTTCAAATACATAAATATCTTGCGGC

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[60-315] 6.36E-41 - T[359-574] 5.78E-43
ProSiteProfiles
ABC_transporter-like (IPR003439) - T[68-307] 14.766 - T[378-595] 14.213
Pfam
ABC_transporter-like (IPR003439) - T[84-239] 6.3E-21 - T[395-527] 2.6E-22
SMART
AAA+_ATPase (IPR003593) - T[92-291] 6.0E-9 - T[404-572] 2.9E-8
ProSitePatterns
ABC_transporter_CS (IPR017871) - T[211-225] .
Pfam
ABC_tran_Xtn (IPR032781) - T[279-351] 9.0E-21

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ABCF2_HUMAN 69.551 % 864 0
ABCF3_HUMAN 38.436 % 419 1.21E-137
ABCF1_HUMAN 39.304 % 373 1.1E-118