- Transcript 'KH2012:KH.L108.12.v1...' >
- Transcript 'KH2012:KH.C6.158.v1....' >
- Region 'REG00001395' >
- Transcript 'Moocul.CG.ELv1_2.S12...' >
- Transcript 'Moocul.CG.ELv1_2.S12...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S125443.g14657.01.t
Possible name(s)
DKC1; TRUB1
Gene model
Location
S125443 [37,889 / 44,187]
Amino acid sequence
Length: 510
>Moocul.CG.ELv1_2.S125443.g14657.01.p
MNGDHKPNKKRKHGSTSIGEIQTSGSFKVEPSEESVKLTTSQWPLLLKNHDKLNIRTNHY
TPLPNGCSPLNRKIEDYVKSGFINLDKPSNPSSHEVVAWVRRILRVEKTGHSGTLDPKVT
GCLIVCVERATRLVKSQQTAGKEYVCIVRLHNAIEDELKLARAVETLTGALFQRPPLISA
VKRQLRVRTIYETKLLEFEPKERLGVIWMSCEAGTYVRTFCVHLGLLLGVGGQMQELRRV
RSGIVTENELLYTMHDVLDAQWKYDHHKDESYLRRVINPLEKLLISHKRIMIKDSAVNAV
CYGAKIMLPGVLRYEDGIEIDQEIVIITTKGEAVCLAIAQMTTAVMSTCDHGIVAKIKRV
IMERDTYPRKWGLGPKATLKKQMIKKGLLGKYGQPNENTPSDWREGFTDKPASTLVTSEG
AQQDMKRKRGESESSEDVKVVAVTEKSPEEVETVVAKKPKKKKKKKDNEAGNESMGANTT
METTLDGSALQSPTKEKKKKKKKKKEVAEA
Nucleotide sequence
Length: 1,874
>Moocul.CG.ELv1_2.S125443.g14657.01.t
GCGCAAAGTGGTATGTTGTTTCTCACTGGTTGTTCGTCACTGCACGTGTATCATCGCATC
GCAGACCACGCTGCAAAGCAGAAAGCAAAAGTAATCAGCCAGCCAATTTTCATTGCACTT
TGACAGTTGATGATACAAAAAGCTTGACAAAACTCAAGAAAATAATTATTTAGCAATAAA
GAAACCGGCCGTGTTATGAATGGAGACCACAAACCCAACAAAAAACGAAAGCATGGATCG
ACTTCAATAGGGGAAATTCAGACCTCTGGAAGTTTTAAAGTGGAACCAAGTGAAGAATCC
GTCAAATTAACAACCTCCCAATGGCCATTACTATTAAAAAATCATGATAAATTAAATATA
AGAACAAATCATTATACACCTTTACCCAATGGCTGCTCGCCTTTGAATCGCAAAATTGAA
GATTATGTTAAATCGGGTTTTATTAACTTGGACAAACCATCCAATCCATCATCACATGAA
GTGGTGGCTTGGGTTCGAAGAATTCTTCGTGTGGAAAAAACTGGACACAGTGGTACACTT
GACCCTAAAGTTACTGGCTGTCTTATAGTATGTGTTGAAAGAGCTACAAGACTCGTCAAA
TCTCAACAAACTGCAGGAAAAGAATACGTTTGCATTGTTCGACTTCACAATGCGATTGAA
GATGAACTTAAACTTGCCAGGGCTGTGGAAACTCTCACAGGTGCGCTCTTCCAAAGACCA
CCTTTAATATCGGCCGTAAAACGACAATTGCGAGTACGGACAATATATGAAACAAAATTA
TTGGAATTTGAACCAAAGGAAAGACTTGGTGTGATATGGATGAGTTGTGAAGCAGGAACG
TACGTTCGAACGTTTTGTGTTCATCTTGGTCTTCTGCTTGGCGTCGGTGGACAAATGCAG
GAACTACGAAGAGTTCGATCTGGCATTGTAACAGAAAATGAACTTTTGTACACCATGCAC
GATGTTTTGGATGCGCAATGGAAGTACGATCACCACAAAGACGAAAGTTATCTTCGCCGT
GTTATAAATCCACTCGAAAAACTTCTCATATCACACAAAAGAATCATGATCAAGGATAGT
GCGGTTAATGCTGTTTGCTACGGAGCAAAAATAATGTTGCCAGGTGTACTAAGGTATGAA
GATGGCATCGAAATTGATCAAGAAATTGTAATAATCACAACTAAAGGAGAGGCAGTGTGT
CTTGCAATTGCTCAGATGACGACAGCCGTAATGTCCACTTGTGACCACGGCATTGTTGCA
AAGATTAAACGAGTCATTATGGAACGGGATACCTACCCCAGAAAGTGGGGGCTAGGACCC
AAGGCCACGTTGAAGAAACAAATGATAAAGAAGGGACTTCTTGGAAAATACGGACAACCA
AACGAAAATACACCGTCCGATTGGAGAGAAGGATTTACAGATAAACCTGCGTCTACGTTG
GTAACATCCGAAGGTGCCCAACAAGATATGAAGAGAAAACGAGGCGAAAGTGAATCTTCT
GAAGACGTGAAAGTTGTTGCTGTGACGGAAAAATCCCCGGAAGAAGTTGAAACCGTCGTT
GCCAAGAAACCTAAAAAGAAAAAGAAGAAGAAAGACAATGAAGCTGGAAATGAATCGATG
GGAGCAAATACTACCATGGAAACAACTCTTGATGGATCTGCGCTACAGTCTCCAACAAAG
GAAAAGAAGAAGAAGAAAAAGAAAAAGAAGGAAGTTGCTGAAGCATGAATGGTGGAGGGT
GATTATGATTTCAACAATCGTTTCCTTGGTTACGTGGTACAACAAGTCTTGTTGCAATAC
GTTTTACCGACACTCCACTACGTTCTGTCAATTTTACGCCACTGCCATCAACTTTTAATA
AATTTCTTAATCAA
| PANTHER |
tRNA_PsdUridine_synth_B_fam (IPR004802) - T[7-505] 1.9E-238 |
| SMART |
Dyskerin-like (IPR012960) - T[39-97] 2.4E-33 |
| Pfam |
Dyskerin-like (IPR012960) - T[40-97] 1.1E-31 |
| SUPERFAMILY |
PsdUridine_synth_cat_dom_sf (IPR020103) - T[41-285] 3.6E-77 |
| TIGRFAM |
tRNA_PsdUridine_synth_B_fam (IPR004802) - T[47-372] 2.1E-163 |
| Pfam |
PsdUridine_synth_N (IPR002501) - T[101-217] 6.2E-20 |
| Pfam |
TruB_C (IPR032819) - T[218-284] 6.0E-19 |
| TIGRFAM |
Uncharacterised_CHP00451 (IPR004521) - T[276-357] 2.0E-8 |
| SUPERFAMILY |
PUA-like_sf (IPR015947) - T[287-368] 4.59E-21 |
| ProSiteProfiles |
PUA (IPR002478) - T[287-362] 17.323 |
| Pfam |
PUA (IPR002478) - T[288-361] 1.4E-18 |
| SMART |
PUA (IPR002478) - T[288-362] 3.9E-21 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DKC1_HUMAN | 71.694 % | 644 | 0 |