- Transcript 'KH2012:KH.C9.180.v1....' >
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- Transcript 'KH2012:KH.C5.42.v1.A...' >
- Transcript 'Harore.CG.MTP2014.S6...' >
- Transcript 'Moocul.CG.ELv1_2.S14...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S14416.g00476.01.t
Possible name(s)
CCT4; CCT7; TCP1
Gene model
Location
S14416 [6,099 / 7,725]
Amino acid sequence
Length: 541
>Moocul.CG.ELv1_2.S14416.g00476.01.p
MMNPQVIFLKEGTDSSQGIPQLISNINACEVVSEAVRTTLGPRGMDKLIVDNRGKATISN
DGATVLNLLDIVHPAAKTLVDIAKSQDAEVGDGTTTVTLLAAEFLKQVKPFVEEKIHPQV
IVRAFRKATHLAITKIRELEVTVKKSDAAEQRNMLENCASTAMNSKLVAAYKSHFAPMVV
DAVTMLDDLLPLNMIGIKKVSGGGLADSTLVAGVAFKKTFSYAGFEMQRKKYKNPKIALL
NVELELKSEKENAEIRVKTVEDYQSVVDAEWSILYEKLDAICKSGAQVILSKLPIGDVAT
QYFADRDMFCAGRVVEQDLKRTMKACGGAIQTSVQNLTDDVLGTCEEFEEEQVGGERFNF
FRGCPQAKTCTILLRGGAEQFMEETERSLHDAIMIVRRALKNDAIVAGGGAIEMELSKYL
RAYARTIKGKEQMLIAAYAQALEIIPRQLCDNAGFDSTNILNKLRKEHAQNEEGKWFGVN
ILKEDVSDNFKEFVWEPSLIKVNALTAASEAACLILSVDETIKNPRSSVDADMAMGKGRP
R
Nucleotide sequence
Length: 1,626
>Moocul.CG.ELv1_2.S14416.g00476.01.t
ATGATGAACCCACAAGTCATCTTCCTTAAGGAAGGAACCGACTCTTCCCAAGGTATTCCT
CAATTAATAAGCAACATTAATGCATGTGAAGTTGTCTCTGAAGCTGTTCGAACAACACTC
GGTCCGAGAGGCATGGATAAACTTATCGTTGATAATAGAGGAAAAGCAACAATTTCTAAT
GATGGAGCAACTGTATTAAATCTTCTTGACATTGTCCATCCAGCGGCTAAAACTCTTGTT
GATATTGCAAAGTCTCAGGACGCTGAGGTTGGTGATGGAACAACCACAGTCACTTTGCTT
GCTGCAGAGTTTTTAAAGCAGGTTAAGCCATTTGTAGAGGAAAAAATCCATCCACAAGTA
ATTGTGAGAGCTTTCAGAAAAGCCACACATCTTGCAATCACAAAAATCCGTGAGCTCGAA
GTGACAGTAAAAAAATCCGACGCAGCAGAACAACGGAATATGCTGGAAAACTGCGCATCA
ACTGCAATGAACTCAAAATTGGTTGCAGCGTACAAATCCCACTTTGCTCCTATGGTTGTC
GATGCCGTTACTATGTTGGATGACTTGTTACCGTTAAATATGATCGGAATTAAGAAAGTA
TCTGGCGGAGGATTGGCAGATTCAACTCTCGTTGCTGGTGTGGCATTCAAGAAAACATTT
TCATACGCTGGATTTGAAATGCAAAGAAAGAAATATAAAAACCCCAAAATTGCGTTACTG
AACGTCGAATTGGAATTAAAATCCGAGAAAGAAAATGCTGAAATTCGAGTGAAAACTGTT
GAAGATTACCAATCAGTTGTTGATGCTGAGTGGTCAATTTTGTATGAAAAATTGGACGCC
ATTTGCAAAAGTGGAGCACAAGTTATTCTTAGCAAACTTCCGATTGGTGACGTCGCTACG
CAGTACTTTGCCGACCGCGATATGTTCTGTGCAGGTCGTGTTGTTGAACAAGATTTAAAG
AGAACAATGAAAGCTTGTGGTGGTGCTATTCAAACATCCGTTCAAAACCTTACCGATGAT
GTCCTTGGAACTTGTGAAGAATTTGAAGAGGAACAAGTTGGAGGAGAGAGATTTAACTTC
TTCCGTGGATGCCCACAGGCGAAAACTTGTACAATTCTTCTTCGAGGAGGAGCAGAGCAA
TTCATGGAGGAAACAGAAAGGTCTTTGCACGATGCCATCATGATCGTTAGACGAGCATTG
AAGAATGATGCGATTGTTGCAGGAGGTGGAGCGATTGAAATGGAATTAAGCAAATATTTG
CGAGCATACGCACGCACAATCAAAGGCAAAGAACAAATGTTGATTGCTGCTTATGCACAG
GCATTGGAAATCATCCCTCGACAACTCTGCGATAATGCAGGGTTTGATTCAACGAATATT
CTTAACAAATTACGAAAGGAACACGCACAAAATGAAGAAGGCAAATGGTTTGGTGTCAAC
ATATTGAAAGAAGATGTTTCTGACAACTTTAAAGAATTTGTCTGGGAGCCCTCCCTCATC
AAAGTGAATGCTTTGACAGCAGCGAGTGAAGCGGCTTGTTTGATTTTGTCAGTCGATGAA
ACCATTAAAAACCCGCGATCATCTGTTGATGCTGACATGGCAATGGGAAAAGGCCGACCA
CGATAA
| TIGRFAM |
Chap_CCT_eta (IPR012720) - T[4-527] 1.5E-264 |
| CDD |
Chap_CCT_eta (IPR012720) - T[5-527] 0.0 |
| PANTHER |
Chap_CCT_eta (IPR012720) - T[11-528] 1.1E-211 |
| PANTHER |
Cpn60/TCP-1 (IPR002423) - T[11-528] 1.1E-211 |
| SUPERFAMILY |
GROEL-like_equatorial_sf (IPR027413) - T[16-143] 1.96E-85 - T[403-524] 1.96E-85 |
| Gene3D |
GROEL-like_equatorial_sf (IPR027413) - T[25-143] 5.6E-182 - T[404-522] 5.6E-182 |
| Pfam |
Cpn60/TCP-1 (IPR002423) - T[32-524] 1.2E-156 |
| PRINTS |
Chaperone_TCP-1 (IPR017998) - T[34-50] 6.3E-31 - T[56-74] 6.3E-31 - T[86-105] 6.3E-31 - T[371-393] 6.3E-31 - T[405-417] 6.3E-31 |
| ProSitePatterns |
Chaperonin_TCP-1_CS (IPR002194) - T[37-49] . - T[58-74] . - T[86-94] . |
| Gene3D |
TCP-1-like_intermed_sf (IPR027410) - T[144-212] 5.6E-182 - T[368-403] 5.6E-182 |
| SUPERFAMILY |
TCP-1-like_intermed_sf (IPR027410) - T[151-211] 1.13E-26 - T[366-402] 1.13E-26 |
| SUPERFAMILY |
GroEL-like_apical_dom_sf (IPR027409) - T[207-376] 9.68E-48 |
| Gene3D |
GroEL-like_apical_dom_sf (IPR027409) - T[213-367] 5.6E-182 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TCPA_HUMAN | 35.455 % | 312 | 9.07E-100 |
| TCPH_HUMAN | 78.277 % | 882 | 0 |
| TCPD_HUMAN | 34.834 % | 295 | 1.09E-93 |