- Transcript 'Moocul.CG.ELv1_2.S16...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S16837.g00586.01.t
Possible name(s)
NR1H2; NR1H3; NR1H4
Gene model
Location
S16837 [19,768 / 26,386]
Amino acid sequence
Length: 586
>Moocul.CG.ELv1_2.S16837.g00586.01.p
MATSFLPSPEPVIVNGNGYETYPHPTRESITASGSPCPECSLYCTIFQSMAYDCCREIRS
CTTCSDRFEHFHNHQHQPEFFPLNPANGDAQYYHGPAHLHQKHHIHDNKSQHGEFTHKLS
HHPQPLNGRHEFSQTTHVNNFVPNHSQVPLYSHSPQTTTHISSFGQSNGLLHSGHIQTTA
VSQTPGINNYTQSHHNGVTMDVKDPTLMDDIKSATNQIEKVSVSIKRRSQRNHRNQEGRK
RNSEDLCQVCGDRASGYHYNALTCEGCKGFFRRSITNRAKYKCKLGGACEMDTYTRRKCP
DCRLKKCKSVGMLEECLLTEIQCQSKRRRKKINKSNKTNGDNSPENGDNDFDIFDFEKNP
ELDNEMRCLVQNVEEAFQEYQINPEMVKRWENRQTSGSNKERCRLSDVATVHVQVLVEYA
KKLAGFSELDPEDQIALLKGSVMQAMLLRNSCGYNHLAEEPNIAKLIDDTGIEKKHLDAL
FEFFHAIRKLEIDSTQYALLIAVVIFDSDYPHVVHKNRVDYSQNKYILALNWHCRQRKKT
GRFIVPKMIECLTSFRTLSHYNTEVVTCWKKRDKLSPLLCEIWDLT
Nucleotide sequence
Length: 1,761
>Moocul.CG.ELv1_2.S16837.g00586.01.t
ATGGCAACGTCATTTTTACCAAGTCCGGAACCAGTCATTGTAAATGGAAATGGATACGAA
ACATATCCTCACCCAACTAGAGAATCAATAACAGCCAGTGGATCACCTTGTCCAGAATGT
TCACTTTATTGTACCATCTTCCAGTCCATGGCATACGACTGCTGCAGGGAGATTCGATCC
TGTACTACTTGTTCTGATAGATTTGAACATTTTCATAATCATCAACATCAACCTGAGTTC
TTCCCATTGAATCCAGCTAATGGAGATGCTCAGTATTATCATGGACCAGCACATCTTCAT
CAAAAGCATCATATCCATGACAACAAGAGCCAACATGGGGAATTCACACACAAACTTTCA
CATCATCCGCAGCCGTTGAATGGACGTCACGAGTTCTCACAAACTACGCATGTCAATAAC
TTTGTTCCAAACCATTCCCAAGTACCATTGTATTCCCACTCGCCCCAGACCACCACCCAC
ATCAGTTCATTCGGACAGAGCAATGGTTTGCTGCACTCTGGACATATACAAACGACCGCA
GTTTCACAGACACCAGGAATAAACAATTATACACAAAGTCATCACAATGGTGTCACTATG
GATGTCAAGGACCCAACCCTAATGGACGATATTAAAAGTGCCACAAATCAAATCGAAAAA
GTGTCAGTTTCCATTAAAAGACGTTCACAAAGAAACCACAGAAACCAAGAGGGCCGAAAG
CGTAATTCTGAAGATTTGTGTCAAGTGTGTGGTGACAGAGCATCAGGGTATCATTACAAT
GCCCTCACCTGTGAAGGATGCAAAGGATTCTTCAGAAGATCAATAACAAACAGAGCAAAA
TACAAATGCAAACTTGGGGGTGCCTGTGAAATGGACACGTACACACGTCGAAAATGTCCA
GACTGTCGTCTTAAAAAGTGCAAGTCCGTTGGAATGTTGGAAGAATGTCTTCTGACTGAA
ATTCAATGTCAATCAAAACGACGACGAAAGAAGATAAATAAATCTAATAAAACGAATGGC
GATAATTCGCCTGAAAATGGTGACAACGATTTTGATATCTTCGACTTTGAGAAAAATCCT
GAACTTGACAACGAAATGCGATGTTTGGTGCAAAACGTAGAAGAAGCATTTCAGGAATAT
CAGATTAATCCCGAAATGGTAAAACGGTGGGAAAATCGACAAACTTCGGGATCTAATAAA
GAACGGTGTCGACTGTCGGATGTTGCAACTGTGCACGTTCAAGTTTTGGTTGAATATGCC
AAGAAGTTAGCAGGATTTAGCGAACTCGACCCTGAAGATCAAATCGCATTGTTGAAAGGC
AGCGTGATGCAGGCGATGTTATTGCGCAATTCATGTGGTTACAATCATCTTGCAGAAGAA
CCAAACATCGCCAAGTTAATAGATGACACAGGGATTGAAAAGAAACATCTCGATGCACTT
TTTGAATTCTTTCACGCCATTCGCAAATTGGAAATAGACTCGACGCAGTATGCGCTGTTA
ATTGCCGTAGTAATATTTGATTCAGATTATCCTCATGTAGTTCACAAGAATCGTGTGGAC
TACTCTCAAAATAAATACATCCTCGCGTTAAACTGGCATTGTCGTCAACGGAAGAAGACA
GGAAGATTCATTGTTCCAAAGATGATCGAATGTTTGACATCATTTCGAACATTAAGTCAC
TACAACACTGAAGTTGTCACTTGCTGGAAGAAGAGGGACAAATTATCTCCTCTGCTTTGT
GAAATATGGGATTTGACTTAA
| Gene3D |
Znf_NHR/GATA (IPR013088) - T[236-345] 5.5E-29 |
| ProSiteProfiles |
Znf_hrmn_rcpt (IPR001628) - T[244-319] 18.431 |
| SMART |
Znf_hrmn_rcpt (IPR001628) - T[244-315] 1.2E-34 |
| Pfam |
Znf_hrmn_rcpt (IPR001628) - T[246-312] 1.3E-27 |
| PRINTS |
Znf_hrmn_rcpt (IPR001628) - T[247-263] 1.7E-16 - T[263-278] 1.7E-16 - T[296-304] 1.7E-16 - T[304-312] 1.7E-16 |
| ProSitePatterns |
Znf_hrmn_rcpt (IPR001628) - T[247-273] . |
| PRINTS |
Liver_X_rcpt (IPR023257) - T[282-296] 6.1E-5 - T[482-495] 6.1E-5 - T[557-574] 6.1E-5 |
| PRINTS |
Nuclear_hrmn_rcpt (IPR001723) - T[308-318] 1.2E-17 - T[408-429] 1.2E-17 - T[429-445] 1.2E-17 - T[490-505] 1.2E-17 - T[547-564] 1.2E-17 |
| SUPERFAMILY |
NHR_like_dom_sf (IPR035500) - T[400-584] 4.98E-45 |
| Pfam |
Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[405-560] 2.0E-15 |
| SMART |
Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[407-559] 1.0E-24 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NR1H3_HUMAN | 34.634 % | 238 | 3.22E-72 |
| NR1H2_HUMAN | 34.615 % | 225 | 3.3E-67 |
| NR1H4_HUMAN | 41.37 % | 259 | 7.54E-80 |