- Transcript 'Boleac.CG.SB_v3.S190...' >
- Transcript 'KH2012:KH.L4.17.v3.A...' >
- Transcript 'Moocul.CG.ELv1_2.S21...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S21612.g00821.01.t
Possible name(s)
RBM23; RBM41; RNPC3
Gene model
Location
S21612 [5,004 / 6,351]
Amino acid sequence
Length: 448
>Moocul.CG.ELv1_2.S21612.g00821.01.p
MDFGGNSKLLVRHFPKLFSLKDKSDFLRYFGAVDVKCFGNKGRMKNCAFATFQSYDIARQ
VIKRLHQTNVLDSLLSVEFVREKAFYNEEEACQNNEINNINQESIKPPTNVSMPHVAPHF
GLNFPQNTELKYKYPQVNADILINICSALIANSGLYNQVLHLMNKMNLENPFQRATFVPS
MMREYLIKLLRLTEDLKSPSVASSESEIECEEDENPNILIPTSIRRLKKVGIKKQNIKRK
FTFSQTVTVPTKQRKVAMKKIFKTTKPINKTISINAPKADRFVLETEAKDKEPTTTVDTE
QGFGKIDKAEAIAEEETENTEPNYSKMDFITEQQLSANRIDNREMKEMSLFKNYSRGEPT
CRLYVKNLAKNVKEKDLAFIFGRYVNFGNQFEMNMFDIRLMTQGRMKGQAFIGFSNVDIA
KRALRDCNGYKLMGRPIVVQFARSAKPK
Nucleotide sequence
Length: 1,347
>Moocul.CG.ELv1_2.S21612.g00821.01.t
ATGGATTTTGGGGGAAATTCAAAATTGTTAGTGCGACATTTCCCAAAGTTATTTTCTTTG
AAGGACAAGTCCGATTTTCTGAGATACTTCGGAGCTGTTGATGTTAAATGTTTCGGGAAC
AAAGGAAGAATGAAAAACTGTGCATTTGCAACATTTCAATCTTATGATATTGCCCGACAA
GTGATTAAACGATTGCACCAAACGAATGTGCTGGACTCGCTGCTTTCAGTAGAATTTGTT
CGAGAGAAAGCATTCTATAATGAAGAAGAAGCTTGTCAAAATAATGAAATAAACAATATT
AATCAAGAATCTATAAAACCACCAACTAATGTTTCAATGCCACATGTTGCCCCACACTTT
GGATTAAACTTTCCTCAAAATACCGAACTTAAGTACAAATATCCACAAGTTAATGCAGAT
ATTCTTATTAACATTTGTTCTGCGCTTATTGCCAATTCAGGATTATATAATCAAGTGTTG
CATTTAATGAATAAAATGAACTTGGAAAATCCGTTTCAAAGGGCTACTTTTGTTCCATCT
ATGATGAGGGAATACTTGATTAAACTTTTACGACTGACTGAAGATTTAAAATCACCAAGT
GTTGCGTCTTCTGAATCGGAAATAGAATGTGAAGAGGACGAGAATCCCAATATATTAATT
CCAACATCTATTCGAAGATTGAAGAAAGTAGGAATAAAGAAACAGAATATCAAAAGAAAG
TTTACTTTTTCACAAACTGTAACCGTTCCAACAAAACAACGTAAAGTGGCAATGAAAAAA
ATATTCAAGACGACAAAACCAATTAACAAAACGATTTCAATCAACGCTCCAAAGGCTGAT
AGGTTTGTGTTGGAAACAGAAGCCAAGGACAAGGAACCGACTACTACTGTTGACACTGAA
CAAGGCTTTGGAAAAATTGATAAGGCTGAAGCAATAGCTGAAGAAGAAACTGAAAATACA
GAACCTAATTACAGTAAAATGGACTTTATAACAGAACAGCAGCTGTCTGCAAATCGTATC
GATAATCGTGAAATGAAAGAAATGTCGTTGTTTAAAAATTACTCCCGTGGTGAACCAACA
TGTCGCCTGTATGTGAAAAACCTTGCTAAAAATGTAAAGGAAAAAGATCTTGCTTTTATA
TTTGGAAGATATGTAAACTTTGGCAATCAGTTTGAAATGAATATGTTTGACATTCGTCTC
ATGACACAAGGTAGAATGAAAGGTCAAGCTTTCATTGGATTTTCAAATGTTGATATTGCT
AAACGTGCATTGAGAGATTGTAACGGCTATAAATTGATGGGCCGACCGATTGTTGTGCAG
TTTGCTCGCTCTGCGAAACCAAAATAA
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[5-106] 3.9E-7 - T[357-448] 1.1E-23 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[5-86] 6.58E-10 - T[337-446] 1.61E-19 |
| SMART |
RRM_dom (IPR000504) - T[8-78] 0.023 - T[362-440] 1.2E-11 |
| CDD |
RBM40_RRM1 (IPR034147) - T[9-79] 6.98003E-30 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[361-444] 14.965 |
| Pfam |
RRM_dom (IPR000504) - T[363-437] 2.7E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RBM40_HUMAN | 36.605 % | 261 | 5.96E-82 |
| RBM41_HUMAN | 39.167 % | 94.4 | 4.63E-21 |