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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.L3.1.v3.C....'
  2. Transcript 'KH2012:KH.C2.88.v3.A...'
  3. Clone 'cieg007m15'
  4. Clone 'cima820644'
  5. Transcript 'Moocul.CG.ELv1_2.S32...'

Transcript Model

Transcript Id

Moocul.CG.ELv1_2.S32085.g01574.01.t

Possible name(s)

LPP; TRIP6; ZYX

Location

S32085 [10,718 / 14,819]

Sequences

Amino acid sequence

Length: 247

>Moocul.CG.ELv1_2.S32085.g01574.01.p
KAMNQQVQSSSVALARPNKSTAPSMYKSKEDELDFLTKNLIDNMNNPPDKELYGYCGRCN
QQVFGEKTGCSALEQIFHISCFTCQSCSKQLHGDQFYSVDDGTFCESCYMNSLEKCTVCS
QIITDRILRATGKPYHSTCFKCIACEMLLDGIPFTVDVSNQIYCIEDFHKKFAPRCSACN
QPIMPEDGQEETVRIVALDRSFHVSCYKCERCGKNLGSREEQQGCYPMDGHIYCLDCNTA
IIQELSK

Nucleotide sequence

Length: 1,042

>Moocul.CG.ELv1_2.S32085.g01574.01.t
AAAGCAATGAACCAGCAAGTTCAATCATCCTCGGTGGCTTTGGCACGGCCAAACAAAAGT
ACGGCTCCATCTATGTACAAGAGCAAAGAAGACGAACTTGACTTTCTCACGAAAAATCTT
ATCGATAACATGAACAATCCTCCTGATAAGGAGTTATACGGGTACTGTGGGAGATGCAAC
CAGCAAGTGTTCGGTGAGAAAACTGGATGTTCAGCACTTGAACAAATCTTTCACATCTCT
TGCTTCACATGTCAATCATGCAGCAAACAATTGCATGGAGATCAGTTCTACTCGGTTGAT
GACGGCACGTTTTGTGAATCATGTTACATGAATTCACTTGAAAAATGCACAGTTTGCTCT
CAAATCATAACAGATCGGATTTTACGAGCCACGGGTAAGCCGTACCATTCGACATGTTTT
AAATGTATTGCCTGCGAAATGTTGCTTGATGGGATACCATTTACGGTTGACGTTTCAAAC
CAAATTTATTGCATTGAGGATTTTCACAAGAAATTTGCCCCACGATGTTCTGCTTGCAAT
CAGCCAATCATGCCAGAAGACGGACAAGAAGAAACTGTGAGAATCGTTGCGCTTGATCGA
AGCTTCCATGTTTCTTGTTATAAGTGCGAGAGATGTGGAAAAAATCTTGGTTCAAGGGAG
GAACAACAGGGGTGTTATCCAATGGACGGTCACATTTATTGTCTTGACTGCAATACTGCG
ATTATTCAAGAACTCAGCAAATAAGATAGTGTATGTCTCGTCGAAAACATAATTAATATG
GCCAACTAATAGCATATTTTCTTCTTGCACATTTTAATATCTTTATTTTTCATAATCATA
GTACGCTTACTCATCCATTCGCGAATTGAGCTGTTAATTCGACAATACTGTACAGTGAGA
TAAACACATGCGTATTTTTATACATTTGCCAATCTTTAAATATTGTGAAAATACTTTTAT
ATGCTTGTTGTTCATGCCATTGTGTCAATACCAATAATATTCTGTAATATTAAAATTTTA
ATACACTTAAATTCAGTTTTTC

InterProScan

ProSiteProfiles
Znf_LIM (IPR001781) - T[54-115] 12.722 - T[116-173] 8.118 - T[174-244] 13.395
SMART
Znf_LIM (IPR001781) - T[55-108] 7.8E-12 - T[115-167] 4.5E-14 - T[175-237] 3.4E-17
Pfam
Znf_LIM (IPR001781) - T[56-111] 6.5E-13 - T[116-172] 2.3E-10 - T[176-237] 5.8E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TRIP6_HUMAN 59.459 % 295 1.22E-98
LPP_HUMAN 59.031 % 292 6.47E-96
ZYX_HUMAN 49.333 % 234 5.5E-74