- Clone 'cien114862' >
- Transcript 'KH2012:KH.C10.256.v1...' >
- Clone 'cien177900' >
- Transcript 'Moocul.CG.ELv1_2.S33...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S33901.g01659.01.t
Possible name(s)
TAF5; TAF5L; WDR38
Gene model
Location
S33901 [458 / 1,757]
Amino acid sequence
Length: 156
>Moocul.CG.ELv1_2.S33901.g01659.01.p
MSLYFATGSLDRTARLWTTERTFPLRIFAGHTDSVGCVRFHSNCSYLATADRTIRLWDVA
SGKTARVMIGHWAPVLSLSLSPNGKYLASSGEDRRIRMWDIASGALIKEMRGHNGTVLSL
DFSPDDSMLASCGMDGCLKVWNTRTTQTAQTRSNTG
Nucleotide sequence
Length: 554
>Moocul.CG.ELv1_2.S33901.g01659.01.t
TTCGGCTGTGGGACACGAATACTTGCCAAAATAAAGTTTTATACCGAGGTCATTCATACC
CAGTGTGGTGTGTATCTGTAAGTGCAATGAGTTTATACTTTGCGACTGGTTCGCTTGACC
GAACTGCCCGCTTATGGACGACAGAACGAACATTTCCTCTACGAATATTTGCCGGACACA
CGGACAGTGTCGGGTGTGTGCGTTTCCATAGCAATTGTAGTTACCTAGCAACAGCGGATC
GCACAATTCGACTTTGGGATGTCGCAAGTGGAAAAACAGCTCGTGTGATGATTGGACATT
GGGCTCCAGTCCTCTCTTTGTCATTATCGCCGAATGGAAAGTATCTCGCGTCGTCTGGAG
AGGACCGCCGTATTCGGATGTGGGACATTGCGTCCGGGGCACTTATAAAGGAGATGAGAG
GACACAACGGGACGGTTCTATCACTTGATTTCAGTCCGGACGATAGCATGCTTGCGTCCT
GCGGAATGGACGGGTGCCTGAAAGTATGGAATACGCGAACCACTCAGACGGCACAAACAC
GCAGTAATACAGGT
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[1-151] 40.075 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[2-65] 1.7E-17 - T[66-155] 1.8E-30 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[4-151] 2.84E-46 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[5-19] 4.9E-6 - T[45-59] 4.9E-6 - T[87-101] 4.9E-6 |
| SMART |
WD40_repeat (IPR001680) - T[21-58] 2.9E-6 - T[61-100] 1.5E-6 - T[103-142] 4.6E-11 |
| Pfam |
WD40_repeat (IPR001680) - T[24-58] 2.2E-7 - T[64-100] 3.7E-8 - T[106-142] 4.1E-9 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[28-67] 11.377 - T[68-109] 16.123 - T[110-151] 16.49 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[45-59] . - T[87-101] . - T[129-143] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TAF5_HUMAN | 50.355 % | 156 | 3.9E-45 |
| TAF5L_HUMAN | 57.823 % | 192 | 4.22E-59 |
| WDR38_HUMAN | 37.931 % | 95.9 | 1.92E-24 |