- Transcript 'Phfumi.CG.MTP2014.S5...' >
- Transcript 'Moocul.CG.ELv1_2.S40...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S40518.g02047.01.t
Possible name(s)
FMR1; FXR1; FXR2
Gene model
Location
S40518 [1,408 / 4,309]
Amino acid sequence
Length: 604
>Moocul.CG.ELv1_2.S40518.g02047.01.p
MDARVVEVRGSNGAFYKAFLADVLPNGISVTFENNWQPERIMPFSEVRQPSITPSEGEEI
RFEENMEVEVHSRANDNEPCGWWKSRIQMTKGEFFVIEYLSCTPKYTEIVTKDRLRYINP
NPCYTPNTILKVTLPVPEELFEFCEKYIDAHKEFENSTGAILVRYNAVKHTLDAIVSNES
ARKRVTIVADLHFRSLRTKLAMLQRVEDAVKQLEMSQQRAESFTERFSLDEDLVGLAIGT
GGANIMAARQISGVVDIVLNEETHTFTVYGDSKEAVMKAREMLEYKEDEVAVPRSFVGKV
IGKKGTTIQEIIDKSGVLRVRVVGDDEKDAKSEDGMVPFVFVGTTECIHNAKAMLNYHVS
YLKDLDKIHKEQVTINQKIRKLDGSAGRSSSQWSINSGGNTQSDDNGNRRGGYRGRGRGR
GRGRGGLGRRMDRPREGENTASEFSNISDTGSETGGTSTDTYGEGKPVRRQNYDSKHMTN
QRNVHAQNGIPKTITVHNGVAATTRNAFDALQHEEEPEKNENETSDKEQATTSATINGTN
GMVNGASGDKPTQNVNKNKNRRNKNKNKKPNFEKNNNLKNDDGKKANPVVNGDSSSKSNN
VVAT
Nucleotide sequence
Length: 2,424
>Moocul.CG.ELv1_2.S40518.g02047.01.t
TTTTTAGTTATATCTAACTGTATATTTATAATGGATGCAAGAGTGGTTGAGGTTCGTGGC
TCAAATGGTGCTTTTTACAAAGCCTTTTTGGCTGATGTGTTGCCTAATGGAATCTCCGTA
ACATTTGAGAACAACTGGCAACCAGAACGCATAATGCCTTTCAGTGAAGTTCGTCAACCA
TCAATTACTCCTTCAGAAGGTGAAGAGATTCGCTTTGAAGAAAATATGGAAGTTGAAGTC
CACTCACGAGCTAATGACAACGAGCCATGTGGATGGTGGAAGTCTCGTATACAGATGACA
AAAGGAGAGTTTTTTGTGATCGAGTATTTATCCTGTACTCCAAAGTATACTGAAATTGTA
ACAAAAGATCGACTTCGTTATATTAATCCAAATCCATGTTACACACCAAACACCATTTTA
AAAGTTACTTTACCCGTCCCAGAAGAACTGTTTGAGTTTTGTGAAAAATATATCGATGCA
CACAAAGAATTTGAAAATAGCACTGGTGCTATACTTGTTCGTTATAACGCTGTCAAGCAC
ACATTAGATGCAATTGTTTCCAATGAATCAGCACGCAAGCGTGTAACAATTGTGGCTGAT
CTTCATTTTCGCAGTTTGCGGACGAAGTTGGCCATGTTACAACGTGTTGAAGACGCTGTG
AAACAACTCGAAATGTCACAGCAGAGAGCGGAATCATTCACTGAAAGATTTTCGCTGGAT
GAAGATCTGGTTGGATTGGCAATTGGTACCGGTGGAGCTAACATCATGGCAGCCAGACAA
ATATCTGGTGTTGTGGATATTGTTCTCAATGAAGAAACTCACACTTTCACTGTATATGGA
GACTCAAAAGAGGCTGTAATGAAAGCAAGAGAAATGTTGGAATACAAAGAAGATGAGGTG
GCGGTTCCAAGATCTTTTGTAGGTAAAGTCATTGGAAAGAAAGGGACAACCATTCAAGAG
ATAATCGACAAATCCGGGGTTCTGAGAGTCCGAGTCGTAGGTGATGACGAGAAAGATGCG
AAAAGTGAAGATGGTATGGTGCCATTTGTATTTGTCGGCACAACTGAATGCATCCATAAT
GCCAAAGCAATGCTGAATTACCATGTTTCATATCTGAAAGACTTGGATAAAATACACAAA
GAACAGGTCACTATAAACCAAAAAATCCGAAAACTCGACGGTTCTGCTGGCCGTTCTTCT
TCTCAATGGTCTATAAATTCTGGAGGCAATACTCAAAGTGATGACAATGGAAATCGTAGG
GGCGGTTATCGTGGGCGAGGTAGGGGCAGAGGAAGGGGTCGAGGCGGCCTTGGTCGTAGA
ATGGATAGGCCTAGAGAAGGTGAAAATACTGCATCAGAATTTTCAAACATATCTGACACT
GGCTCTGAAACAGGTGGCACCAGCACTGACACTTACGGTGAAGGAAAACCCGTCCGACGT
CAAAATTATGACTCAAAACATATGACTAATCAAAGAAATGTCCATGCTCAAAACGGAATT
CCAAAAACTATCACAGTTCATAACGGAGTTGCAGCCACTACGAGAAATGCATTTGATGCC
TTGCAACATGAAGAAGAACCAGAAAAAAATGAAAATGAAACTTCTGATAAGGAACAAGCC
ACCACCTCTGCAACTATCAATGGAACAAACGGAATGGTGAATGGGGCAAGTGGAGACAAG
CCCACGCAAAATGTTAATAAAAATAAAAATAGAAGAAATAAAAATAAAAACAAGAAACCA
AATTTTGAAAAAAATAATAATCTGAAAAATGATGATGGAAAAAAGGCAAATCCAGTAGTA
AATGGTGATAGTTCCAGCAAAAGTAACAACGTGGTTGCTACCTGAGGTCATGTTATACAT
TTTAATGCTACTGCAACGTTTTAGTTTACAATATATCAATGTAACTTTCATTCTTTTTAA
TGATCCAAAAAGTATTTTTTTTTAATTTGACAAGCTACTGTATTTCCGAATACCATAACG
AAGGAAGCCACGATTTTTATTTTGTTGCTTTCTGCCGCATTTTCAAGTCCGGATAATATC
CTCCAACATTTTTTATACGTTATTTTACTGATATCTTCTTTGTGTTACACATGCACATGA
CATATGTAAAACATTTTCATTTCACTGTGCATATATGAGGTGATAAACCATCCAGTTTAA
GTTCATTGTCATTTAACCTAAACCTTGTATGTTTCAGTAAAAATGTAAATTTTATGCATG
ATTGCAATACCCCGCATATTTACTACAATCTATTCACTTTTGTCAACGTAACACATTTTA
CTGTGAGTATTAAATTGTTGGCAATTGAATTGCTGTTTTTTGCATTACTATTTATTTCCA
CTTTGTAAATACGTAAGTGCATATATATATATGTATATGCCTGTCGAATTTTGTAGCTAA
GTGAAATACATTGGTCACAAATAA
| ProSiteProfiles |
Agenet-like_dom (IPR008395) - T[3-50] 12.46 - T[66-118] 19.797 |
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[221-284] 1.3E-25 - T[285-363] 6.1E-26 |
| SMART |
KH_dom (IPR004087) - T[221-288] 1.1E-5 - T[289-360] 1.5E-4 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[222-289] 1.32E-11 - T[288-361] 3.49E-11 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[224-284] 5.7E-7 - T[289-356] 5.5E-12 |
| Pfam |
FXMRP1_C_core (IPR022034) - T[358-472] 9.8E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FXR1_HUMAN | 51.571 % | 403 | 1.5E-133 |
| FXR2_HUMAN | 51.724 % | 405 | 8.25E-134 |
| FMR1_HUMAN | 52.367 % | 356 | 4.33E-115 |