- Clone 'ciem840f18' >
- Clone 'cign081j24' >
- Transcript 'Moocul.CG.ELv1_2.S53...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S53963.g03195.01.t
Possible name(s)
NPC1; PTCHD3
Gene model
Location
S53963 [9,680 / 19,409]
Amino acid sequence
Length: 1,152
>Moocul.CG.ELv1_2.S53963.g03195.01.p
MMDGPLKKAWIAAGAVSYFGLILGILTITLFLPLSFVVMGETDAVLIAQHCGSFKMVAYW
TIGIGGITILFYLLTGLSTLFKGKGFTFLSAFLMFLHVLLVFGLMIWGLINTNIRKDYLQ
DMWKEMNETTVDILQSHYSCCGFENASEYNFAIPDSCYAVKDQNIKWPNGCYERVLSINL
ETPKVLNSAGESVSVESKSQNPLLSAFVMLIVLLLGTSIIALLLFSYVAVKTDFENLPKR
PTSAEVLLKHKHIEMNGNKSFTNASQSTFMTTSGSKDELATVTQPEKPSTPTSSSSETYS
ISESEGKRNKCFKFTNVIAYHMEEAFYSFGIMVGKNPKKTIVLSLILAVALSIGLLQRRE
QPRGGSSFLPAKLEILDQYTAYLIYFKARERLQQVLVLEDGDVLTTDIFQKTVELDKRIK
ELISNDNNTLSEICQSFVGTCNQNSLMELWNFNQTILTGVTRNDIVEKINEPNLTSPIFK
NPLKIDSIIGELIRDANGNISSAKAHLIEYTTVIYDDDWEEKFVELVQAYDELTLHVKAE
SSRNKAAGASYTRELPLLFAGFLLVFLYISVMTGKFSIIKHRVWIALLGVITAGLSLSTG
IGLAASITFEWTVLHLIGPFLVIGIGVDDMFILLQTWNTIDNDPTLRNLPVYERAGFCLK
SAGVSITITSVTDLVAFAVGATSQLVAFESFSIYTAICIILLFAFQCTFFLACTVLDQQR
RENKRDACCCCIQYGPTYVEGACANKEYFQRFFENVLGWGMTYTVVKVIAIVLTLTLTAV
MAWGFSKLQVGYDPDWYLPSDSYVVDFNKKVDEYFTAGVKSDVFVINVDFYEERNKLSEL
YNVLEKNTNVDNVYLESWYESYKLWANETSTANRPTFFASIRQFIGSEAGRNYKYDVVFS
KTGELKASKFPFRHRETKTGAEEVAIMDDLRKDINTVGFSNYSFPFSRVYFNYEIIKIIQ
GEVYKNLGITMLCVFIMVLPMIASLQMSLWVVLCVIFTILDVAGTMYFIGLYIETSTIIT
LLLTVGLAVDYAAHIAHKFLTLRGTRGMRMRVALAHVGPAVFNGGFSTFLALSLLAGSDT
YSYKVFFTIFTCVVFYGLWNGLIFLPAVLGFIGPPAHATAIKAELHPHSVAKDNKVESTI
ENPYVENNIERT
Nucleotide sequence
Length: 3,999
>Moocul.CG.ELv1_2.S53963.g03195.01.t
TGACAAATACAGTAAACTATTATATTTATAGTTTATTGATCACAACTATAAAATAATAAT
ATAATACAGGTAAGTGTTAAGAGGTGGTTGGGGTCACGTCACTCACGAAGACCATGATGG
ACGGACCTTTAAAGAAGGCATGGATAGCTGCGGGAGCCGTCTCATACTTCGGACTCATTC
TTGGCATCTTGACGATCACATTATTTCTTCCTCTGTCGTTCGTCGTTATGGGAGAGACGG
ATGCTGTGTTAATCGCTCAGCACTGTGGAAGTTTCAAGATGGTGGCTTACTGGACCATTG
GAATCGGTGGGATCACAATATTGTTCTACTTACTGACGGGCTTGTCTACATTGTTCAAGG
GAAAAGGGTTTACATTCCTCAGTGCCTTCCTGATGTTCCTTCATGTTCTCCTCGTTTTCG
GTCTGATGATTTGGGGATTGATCAACACAAACATAAGAAAGGATTATTTACAAGACATGT
GGAAGGAGATGAATGAAACAACAGTTGATATTCTGCAGAGTCACTATTCATGCTGTGGGT
TTGAGAACGCATCAGAATACAATTTTGCAATTCCTGATTCATGTTATGCGGTGAAAGATC
AAAATATCAAATGGCCAAATGGATGTTATGAAAGAGTTCTTTCGATTAACCTTGAAACAC
CAAAAGTACTGAACAGTGCTGGAGAGTCTGTCAGTGTAGAATCAAAATCACAGAATCCAC
TGCTATCAGCCTTTGTCATGCTGATTGTGTTATTGCTTGGTACAAGCATTATAGCTCTGC
TGCTGTTTTCATACGTTGCTGTCAAAACGGACTTCGAAAATTTACCAAAACGACCGACAA
GTGCTGAGGTTTTACTGAAGCATAAACACATTGAGATGAATGGAAACAAATCCTTCACAA
ACGCCTCACAAAGCACATTCATGACCACGAGTGGTAGCAAAGATGAACTTGCTACAGTAA
CTCAACCAGAGAAACCTTCCACTCCGACATCAAGCTCTTCAGAGACATATAGCATTTCTG
AATCAGAAGGGAAAAGAAACAAATGTTTTAAATTTACTAACGTGATTGCTTATCACATGG
AAGAGGCCTTTTATTCCTTTGGTATTATGGTTGGAAAAAATCCTAAAAAAACAATAGTTT
TATCCTTAATTCTCGCAGTCGCACTTTCCATCGGGTTGTTGCAACGTCGTGAACAGCCGC
GTGGTGGCAGCAGCTTTCTTCCTGCTAAGCTTGAAATATTGGATCAATATACCGCCTACC
TCATCTACTTCAAGGCAAGAGAAAGACTTCAACAAGTTCTTGTTCTGGAAGATGGTGATG
TTCTCACAACCGACATCTTTCAGAAGACAGTGGAGCTTGATAAGAGAATCAAGGAGTTGA
TCTCGAATGATAACAACACATTGTCAGAGATCTGCCAAAGTTTTGTTGGTACTTGTAACC
AGAACAGTTTGATGGAACTGTGGAACTTCAATCAGACGATACTCACTGGCGTGACCAGGA
ATGACATTGTAGAGAAGATCAATGAACCCAATCTAACAAGTCCTATCTTTAAAAATCCTC
TCAAGATCGACAGCATCATAGGTGAGTTAATTCGTGACGCAAATGGAAATATTTCATCAG
CAAAAGCACATTTGATCGAATATACAACAGTGATATATGATGACGACTGGGAGGAAAAGT
TCGTGGAGTTGGTTCAGGCATATGATGAATTAACTTTGCATGTGAAGGCAGAAAGTAGCA
GAAACAAAGCAGCAGGAGCTTCCTACACCAGGGAACTTCCTTTGTTGTTTGCAGGCTTCT
TACTCGTCTTCTTGTACATCAGCGTAATGACAGGGAAATTCTCCATAATCAAGCACAGAG
TTTGGATCGCATTACTGGGCGTGATTACCGCTGGTTTATCATTGTCAACTGGCATCGGAT
TGGCTGCTTCCATAACATTTGAATGGACTGTGCTTCATTTGATTGGTCCATTCTTGGTTA
TAGGAATAGGTGTGGACGACATGTTTATTTTGCTTCAAACGTGGAATACGATCGACAATG
ATCCTACGTTGCGCAATCTTCCCGTGTACGAACGAGCAGGGTTTTGTTTGAAGTCTGCAG
GCGTTTCCATCACAATAACATCAGTAACAGACCTTGTAGCATTTGCTGTCGGTGCAACAA
GTCAACTTGTAGCTTTTGAATCATTCAGCATTTACACTGCAATATGCATCATTCTGCTAT
TTGCATTCCAGTGCACTTTCTTTCTGGCGTGTACAGTATTGGATCAACAAAGACGAGAGA
ACAAGCGAGATGCGTGCTGTTGTTGTATTCAGTATGGACCAACATACGTTGAAGGAGCAT
GTGCTAATAAAGAATATTTTCAACGTTTTTTTGAGAATGTTCTTGGATGGGGAATGACGT
ACACGGTAGTGAAAGTAATTGCAATTGTACTAACATTGACTCTCACTGCTGTTATGGCTT
GGGGATTTTCTAAATTGCAAGTTGGATACGATCCTGATTGGTATCTCCCGTCTGACAGTT
ACGTTGTCGATTTCAATAAGAAAGTGGATGAATACTTTACTGCAGGAGTGAAGTCTGATG
TTTTCGTCATCAACGTGGACTTTTATGAAGAAAGAAACAAACTTTCAGAACTTTATAATG
TCCTCGAGAAAAACACAAATGTGGATAATGTATATCTGGAAAGTTGGTACGAGTCTTACA
AGCTGTGGGCGAACGAAACTTCTACAGCCAACAGACCAACTTTCTTCGCCAGCATTCGAC
AATTCATCGGCTCGGAAGCAGGAAGAAATTATAAATACGATGTTGTGTTTTCGAAAACTG
GTGAATTGAAAGCATCGAAGTTTCCCTTCCGTCATCGTGAAACCAAAACTGGAGCAGAAG
AAGTTGCAATAATGGACGACTTGCGAAAGGACATCAATACTGTTGGATTCTCAAACTACT
CATTTCCATTTTCAAGAGTGTACTTCAATTACGAAATCATTAAAATTATCCAAGGAGAAG
TGTACAAGAACCTGGGCATTACCATGTTATGTGTTTTCATTATGGTTTTGCCGATGATAG
CAAGTCTTCAAATGAGCTTGTGGGTGGTCCTTTGTGTCATCTTTACTATACTTGATGTCG
CTGGAACCATGTACTTTATTGGTTTGTATATCGAGACCAGCACCATCATTACCCTGTTGC
TGACAGTTGGTTTGGCGGTTGATTATGCAGCGCATATTGCACACAAGTTCCTGACTCTGA
GAGGCACCAGGGGCATGCGGATGAGGGTAGCACTCGCACATGTTGGTCCTGCTGTTTTTA
ATGGCGGCTTCAGTACTTTCTTGGCTCTTTCATTATTAGCGGGATCAGACACATACTCAT
ACAAAGTTTTCTTCACAATTTTCACGTGCGTGGTGTTTTATGGCCTGTGGAATGGTTTAA
TATTTCTACCAGCTGTACTCGGTTTCATTGGTCCACCTGCGCACGCTACAGCGATTAAAG
CTGAGTTACACCCACATTCTGTTGCTAAGGATAACAAAGTTGAAAGTACGATTGAAAATC
CCTACGTTGAAAACAATATCGAACGAACGTAAAAAGCTAACGAAAATGAACGAACATTTA
CAATATGTATGACAATCATATTACCATATCAAGCACTGCGCTGTGGTTTAAATTCTGTAC
GAAAGTTATCCTTTTTTTTGAAAGCTCCTTTGCAGTTTATCATGCAATTTAGATAATTTA
ATGTTATTTTATGCAATATAAAGTTGTTCATATGACGTTTCATTTTTTTTTTTTTTATTA
ACGGTTGTTATGCGTTTACAAATGCACTTTCATGTACCATTTCATCATCGATAAACCTCT
ATTTCTGTTCGTATACGCACAATCCCCTTATCCACCCATCATCCTATTTATTATTGCAAT
TAATTCTTTTAATCCTCTTATGATTTAGCGTTTTTACTGTTTATGAAGAATACCGAAATG
TACTTTAGAATGTTTTTAAATAATAAATTTTATGAAAAG
| Pfam |
Tetraspanin/Peripherin (IPR018499) - T[18-177] 2.7E-11 |
| Gene3D |
Tetraspanin_EC2_sf (IPR008952) - T[110-180] 2.6E-6 |
| SUPERFAMILY |
Tetraspanin_EC2_sf (IPR008952) - T[117-177] 8.24E-7 |
| PRINTS |
Acrflvin-R (IPR001036) - T[201-225] 2.2E-5 - T[612-636] 2.2E-5 - T[664-687] 2.2E-5 |
| Pfam |
Ptc/Disp (IPR003392) - T[394-1109] 2.0E-88 |
| ProSiteProfiles |
SSD (IPR000731) - T[554-716] 30.567 - T[987-1111] 8.816 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NPC1_HUMAN | 22.167 % | 116 | 2.99E-26 |
| NPCL1_HUMAN | 24.214 % | 107 | 2.54E-23 |
| PTHD3_HUMAN | 23.1 % | 118 | 6.05E-27 |