- Transcript 'Cisavi.CG.ENS81.R254...' >
- Transcript 'Phmamm.CG.MTP2014.S3...' >
- Transcript 'Moocul.CG.ELv1_2.S59...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S59765.g03737.01.t
Possible name(s)
SRSF4; SRSF5; SRSF6
Gene model
Location
S59765 [7,653 / 8,959]
Amino acid sequence
Length: 311
>Moocul.CG.ELv1_2.S59765.g03737.01.p
MPPSRVYIGRLSYRARESDVERFFRGYGKIRDVMLKNGYCFVEFDDERDADDAVHDLSGK
ELCGERIIIEHARGTPRGPGGNFVRDYDPPRQRNYGGGGGGGYGGGGGYRNDRDRNRGGG
GGGGRGFGPPRNTDHRLIVENLSSRVSWQDLKDYMRQAGEVTFADANRYRKNEGVVEFAT
YEDMKEALEKLDNTEINGRRIRLIEDTKTRKSHSRSRSRSRSRGSRSRKRSKSGDRKRSR
SRSHSGSRSPSPKKRSSDRHSRSRSRSHDGSRNGDEINGGRGSKSPHGSDGHSPAHSNNS
DHRSSRSPSPN
Nucleotide sequence
Length: 936
>Moocul.CG.ELv1_2.S59765.g03737.01.t
ATGCCACCATCACGGGTTTACATCGGGAGATTGAGTTACAGGGCAAGGGAGAGTGATGTG
GAGAGATTTTTCCGAGGGTATGGAAAAATTAGGGATGTCATGCTGAAGAATGGATACTGC
TTTGTGGAATTTGATGACGAACGAGACGCTGATGATGCGGTGCATGATCTAAGTGGCAAG
GAACTTTGCGGAGAGCGAATCATCATCGAACACGCACGAGGAACACCAAGAGGACCTGGA
GGAAACTTTGTCAGAGACTATGACCCACCGCGGCAAAGAAATTATGGAGGGGGAGGTGGC
GGTGGATATGGTGGAGGGGGAGGATACAGGAATGATAGAGATAGAAATCGTGGGGGTGGC
GGTGGTGGAGGACGAGGGTTTGGACCACCAAGAAACACGGATCACCGTTTAATTGTGGAA
AACTTATCGTCACGTGTCAGCTGGCAAGATCTTAAGGATTACATGCGACAAGCGGGAGAA
GTTACTTTTGCGGATGCAAATCGATATCGAAAGAATGAAGGTGTTGTGGAGTTTGCAACA
TACGAGGACATGAAAGAAGCCCTGGAAAAACTCGATAACACCGAAATAAATGGAAGACGA
ATTCGTTTGATCGAAGACACCAAAACTCGAAAGTCTCATTCTCGATCACGCAGTCGTAGC
AGATCCCGTGGAAGTCGCAGTAGAAAACGTTCAAAGTCGGGCGATAGAAAAAGATCAAGA
TCGCGATCTCACAGTGGATCTAGAAGTCCATCACCCAAGAAACGTTCCAGTGACAGACAC
TCAAGATCTCGCTCGCGTAGTCATGATGGTTCAAGAAATGGAGATGAAATAAATGGTGGC
AGGGGTAGTAAATCCCCACATGGAAGTGATGGACATTCACCTGCTCATAGCAATAATTCT
GACCATAGATCGTCAAGGTCACCCAGTCCAAATTAA
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[1-80] 2.3E-20 - T[134-207] 1.2E-24 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[3-84] 6.22E-35 - T[132-202] 6.22E-35 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[4-74] 16.381 - T[135-208] 12.424 |
| CDD |
RRM1_SRSF4-like (IPR035585) - T[5-74] 1.84059E-39 |
| SMART |
RRM_dom (IPR000504) - T[5-70] 1.2E-17 - T[136-204] 4.0E-14 |
| Pfam |
RRM_dom (IPR000504) - T[6-67] 4.3E-15 - T[137-202] 7.9E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SRSF4_HUMAN | 63.592 % | 246 | 2.34E-78 |
| SRSF6_HUMAN | 60.563 % | 223 | 3.72E-71 |
| SRSF5_HUMAN | 56.585 % | 199 | 1.36E-62 |