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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S2...'
  2. Region 'REG00000302'
  3. Molecular Tool 'En>dn-FGFR (Stolfi 2011)'
  4. Transcript 'Phfumi.CG.MTP2014.S2...'
  5. Transcript 'Moocul.CG.ELv1_2.S65...'

Transcript Model

Transcript Id

Moocul.CG.ELv1_2.S65129.g04216.01.t

Possible name(s)

EEA1; FYCO1; RUFY1

Location

S65129 [68,577 / 73,859]

Sequences

Amino acid sequence

Length: 1,510

>Moocul.CG.ELv1_2.S65129.g04216.01.p
MFNRIRRIGANASPSKTNSSGFICPMCKAVFDDASGLTLHFDEKHGDNSPQASPPPAQKS
QPPAVNDKPATNGEVALQPKLSAGTPSSGGEMVSKNEMLILQKELKKLENEIEAERITTE
SLKSEVGELIKYRSLGQDAEMLQQQLTMAIDTNEKLAREKEIVEQKAAKQSQNMIKETYD
EMAGVKDDLKEKNENLSLELEKAAKWIRDLESQLIQRPGADDVMVLKKELVTVQTMMDKM
TLESENEKEEIVDKNNILSADLENYKQLSEQANEKCATLEAENVNLKTQLSTSMEDSEGS
KNEATESFNKKITALEENLENMKADLQQEQQNTKTLAEGKTSLENTLSDVNFQLETERKN
IKTTAENLSQLQQDKSSLVENISKLQKENESIVSELEKKLHEKSEELKNFQLSATEQRAR
TESLNLTFQELSSQHENTEKSLSESKAKYAELQEKFSKLKTEKIELERKSQMDLQIRVAA
SQDLQVKVQSLEGINQQMQSSIDKLNDDLKVNQSSASEDKNSLQRELLDKEKQCLKLELE
SQQLNENFKKTKSELEQIQESLTSRESDYNLVAENLRKLELDKSDNANEIEQLNFKLDAT
QLKFEEEKAKKKALDDEVQKLQDERSSLMENIEAGEGQNAIIDQLKTENEDVREREKLLK
NKLEEIVVNHEEVIATSTAEIHSNKSSLASAQQNIDLLETNNEKLSSEIDSINQKYNKLS
DEFDEKSKRLNDAIQESLQLKSDLEAQNSSLEQKLQDKVVEYEKINSSLTEVRANAENLK
TQFEEARKSQHDENVDLQKKLTAAEVLLAQSTSEVEELKGKLQVELEEKEELKNQHQSSF
ERMKESHREKVSALQADLTNDKNENMDLKETVSKLTQQSDNLNETLKQREQSNTELQSLL
KEKESGHKTLESEFDQFKISSEENQKCNEEKQATLNKSLDEMKVEKQNLIKSHSVEINDV
QTKLEDKLQLLQEKESKIVELNAEISSQLSQLTEKQAQFDDTYMKLLKQAEEHEATKTNL
QLLKTNMENSTTQNESVIVELRNKSEDQEKQIEVFQTDIASLNSKISTLEEEAKSSLASK
EELETQLNEVKNTLDQTTYNLSKTKLELDAKSSALVEGESKISEISADLDEVRNNLNSVQ
SEKAAVGQSLQTEHEKCTKLEQKLEETYKEFEVQKTQHLERASEYEKEHATLCDKIKNME
NVIEDLKRKFENENKERLANEQAWLDEKEAVVGDFNKKEEGWNVEKEELLQSQTTLKNAQ
QILINSKMEIQHKLDELSKDVQRKDDLASKLQTQVSEIQEKANHEKEENLQHLNKKCEEF
ITLSEQKQEIETTMIEQIQTLRENLDAVRNEWQASIQQLDVLKTESDEYKRQSALLEGTI
QSNSDERRALLERCLRSEQQLEDLQKQEIQMKRKLEDAHAAMHELGRENQALQVKHTSVL
TRQWADDREAVECRGCQIQFSLTVRKHHCRHCGNIFCSDCSMRTATVASSKKPVRVCDKC
YDDLFTTGGI

Nucleotide sequence

Length: 4,533

>Moocul.CG.ELv1_2.S65129.g04216.01.t
ATGTTTAACCGCATCCGAAGAATAGGAGCAAATGCTTCACCAAGTAAAACAAACAGTTCT
GGGTTCATTTGCCCCATGTGCAAAGCCGTTTTCGATGATGCCAGTGGTCTTACTCTTCAC
TTTGATGAAAAGCATGGAGATAATTCACCACAGGCATCACCGCCTCCTGCTCAAAAGTCA
CAACCTCCTGCTGTAAATGACAAACCTGCTACGAATGGAGAAGTCGCGCTACAACCGAAG
CTTAGCGCTGGCACGCCGAGTAGCGGGGGTGAAATGGTATCCAAAAATGAAATGTTAATA
CTGCAAAAGGAATTAAAGAAGTTAGAAAATGAAATAGAAGCGGAACGAATTACAACAGAA
AGTCTGAAATCAGAAGTTGGTGAACTGATTAAATATCGCAGTCTTGGACAAGATGCAGAA
ATGCTCCAGCAACAACTCACCATGGCAATTGACACAAACGAAAAACTTGCAAGGGAGAAG
GAAATAGTTGAGCAAAAAGCTGCAAAGCAATCCCAAAATATGATAAAAGAAACTTACGAC
GAAATGGCTGGTGTGAAAGATGATTTGAAAGAGAAGAACGAAAACTTGAGTCTTGAGCTT
GAAAAAGCAGCAAAATGGATACGAGATCTTGAATCCCAGCTAATACAACGGCCTGGAGCA
GATGATGTGATGGTGCTAAAGAAAGAACTTGTGACCGTCCAGACTATGATGGATAAAATG
ACGCTTGAAAGCGAAAATGAAAAAGAAGAGATTGTGGATAAAAACAACATTCTTTCAGCA
GATCTTGAAAATTATAAACAACTGTCCGAACAGGCGAATGAAAAATGTGCAACGTTAGAA
GCGGAAAATGTTAATTTGAAAACACAACTAAGCACTTCAATGGAAGATTCCGAAGGTTCA
AAAAATGAAGCGACAGAAAGTTTTAATAAAAAGATAACCGCGCTGGAAGAAAATCTTGAA
AACATGAAAGCAGATTTGCAGCAGGAGCAACAGAATACCAAAACACTTGCCGAAGGTAAA
ACAAGCTTGGAAAATACTTTGTCTGATGTCAATTTTCAGCTTGAAACAGAAAGGAAAAAC
ATCAAAACCACTGCAGAAAATTTAAGTCAACTTCAACAAGATAAATCATCTCTTGTTGAA
AATATTTCAAAGCTGCAAAAAGAAAATGAGTCGATCGTATCCGAGTTAGAAAAGAAACTG
CATGAAAAATCTGAAGAGCTTAAGAATTTTCAACTTTCTGCAACAGAACAGAGAGCTCGT
ACTGAAAGTTTAAACCTTACATTTCAAGAACTTTCAAGTCAACATGAAAACACAGAAAAA
TCGTTGTCAGAATCAAAAGCGAAATATGCGGAACTGCAAGAAAAATTTTCCAAATTAAAA
ACTGAAAAAATAGAACTTGAAAGGAAATCACAAATGGATTTGCAAATCCGAGTGGCTGCG
TCGCAAGATTTGCAGGTCAAAGTACAAAGTTTGGAAGGGATTAATCAACAAATGCAAAGC
TCAATCGATAAACTTAATGATGATCTGAAAGTTAACCAATCTTCTGCTTCTGAGGATAAA
AATTCGCTCCAGAGAGAGCTGTTGGATAAGGAAAAACAATGTCTCAAGCTGGAGCTCGAG
TCTCAGCAATTAAACGAAAATTTTAAGAAAACAAAATCAGAATTGGAACAAATTCAAGAA
TCGCTTACCTCAAGAGAATCTGATTATAATTTGGTTGCAGAAAATCTGCGAAAACTTGAG
CTAGATAAAAGCGATAATGCTAACGAAATTGAGCAACTGAATTTTAAACTAGACGCTACG
CAATTAAAGTTTGAAGAAGAAAAAGCGAAGAAGAAGGCGTTGGATGATGAAGTTCAAAAA
CTACAGGATGAGCGATCGAGTTTAATGGAAAATATTGAGGCTGGTGAAGGACAGAATGCG
ATAATCGACCAATTGAAAACGGAGAATGAAGACGTTCGTGAGCGGGAGAAATTATTGAAG
AATAAATTAGAAGAAATTGTCGTAAATCATGAGGAAGTTATAGCAACTTCAACAGCTGAG
ATTCATTCAAACAAATCAAGTTTGGCTTCCGCACAGCAAAATATTGATTTGTTGGAAACA
AATAATGAAAAGTTGTCATCTGAAATTGATTCAATCAATCAGAAATACAACAAGCTGTCT
GATGAGTTTGATGAAAAGTCGAAGAGATTAAACGACGCCATACAAGAAAGTCTGCAATTA
AAATCGGATCTGGAAGCTCAGAACTCGTCACTAGAACAAAAACTACAAGATAAAGTTGTT
GAATATGAAAAAATAAATTCAAGTTTAACTGAAGTTCGAGCAAACGCTGAGAATTTGAAA
ACACAATTTGAAGAAGCGAGGAAAAGTCAACATGATGAAAATGTTGACCTTCAGAAGAAG
TTAACAGCTGCTGAAGTACTTTTGGCTCAATCAACTTCTGAAGTTGAGGAGCTAAAAGGA
AAACTACAAGTCGAATTGGAGGAGAAAGAAGAATTGAAGAATCAGCATCAATCTTCATTT
GAGAGAATGAAGGAAAGTCACCGGGAAAAAGTTTCAGCTTTGCAAGCCGATCTCACTAAC
GACAAAAATGAAAATATGGATTTGAAAGAAACTGTTTCGAAATTGACACAACAATCTGAT
AACTTGAACGAAACTTTGAAGCAGCGAGAGCAAAGTAACACGGAATTGCAAAGTTTGTTA
AAAGAAAAAGAATCTGGGCATAAAACTTTGGAGTCTGAATTTGATCAGTTCAAAATTTCA
TCGGAAGAAAATCAAAAATGCAATGAAGAAAAACAGGCAACTTTGAATAAAAGTTTAGAT
GAAATGAAAGTAGAAAAACAAAATTTAATTAAATCACATTCGGTGGAAATCAATGATGTT
CAAACCAAGTTGGAGGATAAGCTTCAACTGCTTCAAGAAAAAGAATCAAAGATTGTTGAA
TTGAACGCAGAAATCAGCTCGCAACTGTCACAGCTGACGGAGAAGCAAGCACAGTTTGAT
GACACATACATGAAACTCTTGAAACAAGCTGAAGAACACGAAGCCACGAAGACAAACTTG
CAATTGTTGAAAACAAACATGGAAAACTCGACAACACAGAATGAAAGCGTTATTGTTGAA
CTTAGAAACAAATCAGAAGACCAAGAAAAACAAATTGAAGTTTTTCAAACTGATATTGCT
AGCTTGAACAGTAAAATTTCAACTCTGGAAGAAGAGGCTAAATCATCACTTGCATCTAAG
GAAGAACTCGAGACTCAGCTGAATGAAGTGAAGAACACATTGGATCAAACAACCTACAAT
CTTTCTAAAACTAAACTGGAATTGGATGCTAAATCGTCTGCTCTTGTTGAAGGTGAAAGC
AAAATTAGCGAGATTTCTGCAGATTTGGATGAAGTGAGAAACAATTTGAATTCTGTTCAA
TCTGAAAAGGCTGCCGTTGGACAAAGTTTGCAAACGGAGCATGAAAAGTGCACAAAACTC
GAGCAAAAACTGGAAGAAACTTATAAAGAGTTTGAAGTCCAAAAAACTCAACATTTGGAA
CGAGCTTCTGAGTATGAAAAAGAGCACGCAACGTTGTGTGATAAAATAAAGAACATGGAG
AATGTGATTGAAGACTTAAAACGAAAGTTCGAGAATGAGAACAAGGAACGACTTGCAAAT
GAGCAAGCTTGGCTCGATGAGAAGGAGGCGGTGGTTGGTGATTTCAACAAGAAAGAAGAA
GGATGGAATGTTGAAAAGGAAGAACTTCTTCAGTCACAAACAACGTTGAAGAATGCACAA
CAAATCCTCATTAACAGTAAAATGGAAATTCAACATAAACTTGATGAACTTTCAAAAGAT
GTTCAGCGTAAAGATGATCTTGCCAGTAAACTTCAAACGCAAGTTTCAGAGATTCAAGAA
AAAGCTAACCATGAAAAAGAAGAAAATTTGCAGCATCTGAACAAGAAATGTGAGGAATTT
ATAACTTTGTCCGAACAAAAACAAGAAATTGAAACGACAATGATCGAACAAATTCAAACA
TTACGTGAAAATCTTGATGCAGTTCGAAATGAATGGCAAGCAAGTATTCAACAACTTGAT
GTTTTAAAGACGGAATCTGATGAATACAAACGACAATCTGCGTTATTGGAAGGCACAATT
CAAAGTAATTCTGATGAAAGAAGAGCTTTATTGGAAAGATGTCTACGTTCGGAACAACAA
CTTGAAGATTTGCAGAAACAAGAAATTCAAATGAAGCGGAAACTCGAAGATGCGCATGCA
GCAATGCATGAACTTGGAAGAGAAAATCAAGCTTTACAGGTGAAGCACACATCCGTGTTA
ACGAGGCAATGGGCTGATGATCGGGAGGCTGTGGAATGTCGAGGTTGTCAGATACAGTTC
AGTCTGACGGTCCGCAAACATCACTGTCGCCACTGTGGAAATATATTTTGTTCTGATTGT
TCAATGAGAACTGCCACGGTGGCATCGTCGAAGAAACCGGTCCGTGTTTGTGATAAATGC
TACGATGATTTGTTCACGACCGGCGGCATCTGA

InterProScan

ProSiteProfiles
Znf_C2H2_type (IPR013087) - T[22-50] 9.369
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[24-45] .
SMART
Znf_FYVE (IPR000306) - T[1439-1506] 1.4E-29
Pfam
Znf_FYVE (IPR000306) - T[1443-1504] 8.7E-19
SUPERFAMILY
Znf_FYVE_PHD (IPR011011) - T[1443-1506] 1.01E-19
Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[1444-1505] 2.7E-21
ProSiteProfiles
Znf_FYVE-rel (IPR017455) - T[1447-1505] 13.573

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
EEA1_HUMAN 45.418 % 228 2.44E-60
RUFY1_HUMAN 39.669 % 88.6 1.3E-17