- Transcript 'Phfumi.CG.MTP2014.S9...' >
- Transcript 'Moocul.CG.ELv1_2.S68...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S68632.g04509.01.t
Possible name(s)
CSDE1
Gene model
Location
S68632 [1,604 / 11,563]
Amino acid sequence
Length: 1,104
>Moocul.CG.ELv1_2.S68632.g04509.01.p
MCKTRGGGGSSYSSISKPQSLLCSCITMWLNGSHPQASLSALLNQQPFRQNVTSPAASLA
LTTQQQALITRSLHENTMHKERSINIKDKQQLRATGGHRPLTRTVSCGFAAQQNNANPRH
SALNHHRALQRSSSYDVRGGNNNGGTATGTAVTPGSPPGGTKNGYRSRETGVVEKLLLSY
GFIKCADREGRLFFHYSQFHGEAHQLHINDEVEFEVSMDTRTGKPVAVQVVKLKKGTVVF
EVFSEERILGEVTSPAAPQGGTVPGMQPAEKGEAQLQGNKYGSLSYERNGEFFFLSYTVN
DLTNKSILLFPGDKVSFYIATEKRTGVLRARKITLVERAPPKRFAGIVTAMKESFGFIER
ADIVKEIFFHYSEVSPNVPDLHVGDHVEFSVQERNNKEVATEVRLLPPGSVLMEQVSEEI
YVGTVEKPLPPKPSNKLQAQQNIAGGDATSPNVSSSTNGGANTPPQPVLALAGSINYTTE
EDESRKIRFGEKDRASNCLYTLCKGDQVSFLTVTDKRNGQQRAAGVSLMLEETLAISGEK
REMGIVAAVKEGFGFIKCLERDSRLFFHCCELLDPTHNIRMSDEVEFTVLQDPIAEKFRL
HATRIRVLSKGTVIFHAVSEDYYSGAIVSLPGSTVPVSPAECLISPALGPNPGFIVYNHH
QNDEGASPEERKIPFLAKDFAEWMEASTLKIGDEVTFRACMVKRTGAQNAVDIRKTKLAV
QRQRSNAAEVIRNIISNLALIEPTPTSPNSETATASSPLKTSLTPRIAMQSSPQKIIPSL
EDTAIQAPSFKLDPVPKSQAMRKVSAPNTPNKLTRSPSNNVTSPNKKNAAALENTEKCYG
WISTVKETFGFIELADHKSEIFFHFSELCGPVEKFTVGCSVSFIAGEKDDKPCALQVSIT
DAVTVNDVSETKHIGVVVRALKSSNNDKSESSYQGKIQYKPNEDCDEMHEISFTPVSLTD
RREFLQVGDNVTFQVSTSGDNLHAMNVSVKRPLIQAAVESIRGDYGFISHEIEGNVKLFF
HMSEVRDGSKNIQTGSVVEFSVVHNQRTGKYSAANIHCVQSKRPERLRMRSEGCRATVTV
TRQPKGPADNEKGFTLERKVPQEA
Nucleotide sequence
Length: 4,238
>Moocul.CG.ELv1_2.S68632.g04509.01.t
CGTCTTTAATCTTTTACTCAAAACATGAAAACAAAGAAAAGTTTTGGTTCATACCTAACC
AACCTAATCAATTTATCGTACGGTAACGTTTGCTTCAGAAAAGAAAATTCACGAAAGAGT
TGAAAAGATTTCATGCTATAATTATTGAGGCAAATAAAGTAAAGTTTTATGCGCTGTGAC
GTAGCAGCATTATTGAGAGGGTTGCGGAACATTACGTTCTTTTGTTGGGAGAAATTCTAT
TAAATCTCGACAGGCAATAGGCCTAACTGTAACCTGCAATCCTTCTGCCATAAAAAGAAA
ACTGTGTAGTCTATGTGCAAGACAAGAGGCGGAGGTGGATCAAGTTACAGTTCAATTTCA
AAACCACAATCGCTGCTGTGTTCATGTATTACGATGTGGCTGAATGGAAGTCACCCACAA
GCTTCTCTATCTGCACTACTTAACCAACAACCTTTCCGACAAAATGTAACATCTCCTGCA
GCCAGTTTGGCATTGACAACACAACAACAAGCTTTGATTACACGCAGTCTTCATGAAAAC
ACAATGCACAAGGAACGCTCTATCAATATAAAAGATAAACAGCAACTACGTGCGACCGGA
GGCCACCGTCCTTTAACACGCACTGTAAGCTGTGGATTTGCTGCACAACAGAACAATGCA
AATCCCAGGCACTCTGCACTTAACCATCATCGCGCACTTCAGCGCTCGTCAAGTTACGAT
GTTCGCGGTGGTAATAATAATGGAGGGACTGCTACCGGTACTGCAGTAACACCTGGAAGT
CCGCCAGGTGGAACAAAGAATGGATATCGCTCGCGTGAGACTGGTGTTGTTGAGAAACTA
CTGTTGTCGTATGGATTTATTAAATGTGCCGATCGTGAAGGACGTCTTTTCTTTCACTAC
AGTCAATTCCACGGTGAAGCGCACCAATTGCACATAAACGATGAAGTTGAATTTGAAGTA
TCAATGGACACTCGAACCGGTAAACCAGTCGCTGTACAAGTTGTGAAATTAAAGAAGGGA
ACTGTTGTGTTTGAAGTCTTCAGTGAGGAAAGGATACTTGGTGAAGTTACCAGTCCTGCG
GCTCCACAAGGTGGCACTGTCCCTGGCATGCAGCCAGCTGAAAAAGGAGAAGCACAATTG
CAAGGAAATAAATATGGAAGTCTCTCATATGAACGAAACGGGGAATTCTTTTTCTTGTCA
TACACTGTAAATGACTTGACAAACAAAAGCATTTTGCTTTTCCCCGGAGACAAGGTATCC
TTCTACATTGCCACAGAGAAGAGGACTGGTGTATTACGAGCTCGGAAAATAACATTAGTA
GAACGTGCACCTCCGAAACGCTTTGCTGGCATCGTTACAGCAATGAAAGAATCTTTTGGA
TTCATTGAACGAGCTGACATTGTCAAGGAGATATTCTTTCACTACAGTGAAGTCAGTCCA
AATGTTCCGGACTTGCATGTTGGTGATCATGTGGAGTTTAGCGTACAGGAACGAAACAAT
AAAGAAGTTGCAACTGAAGTTCGTTTATTACCACCGGGCTCCGTCCTCATGGAGCAAGTG
TCCGAGGAAATATATGTTGGCACAGTTGAAAAACCACTACCTCCAAAACCAAGCAACAAA
TTACAAGCACAGCAAAATATAGCTGGTGGAGACGCAACTTCACCGAATGTTTCCTCATCA
ACAAATGGAGGCGCAAACACACCTCCACAACCTGTCCTTGCGCTTGCTGGTTCTATCAAT
TACACAACAGAAGAAGACGAGTCACGAAAGATACGCTTTGGTGAAAAAGACAGAGCTTCA
AACTGCCTCTACACCCTCTGCAAAGGAGATCAGGTTTCGTTTCTAACTGTGACGGATAAA
CGAAACGGACAGCAACGTGCTGCAGGTGTCAGTTTGATGTTGGAAGAAACACTCGCTATC
AGTGGAGAAAAGCGAGAAATGGGTATTGTGGCAGCAGTGAAGGAAGGTTTTGGCTTTATT
AAGTGTTTGGAACGTGATTCTCGTTTGTTTTTTCATTGCTGTGAACTTCTTGACCCAACA
CATAACATTCGGATGTCCGATGAAGTTGAATTTACTGTTCTTCAAGATCCTATTGCTGAA
AAGTTTAGACTTCATGCAACACGTATTCGTGTTCTTTCAAAAGGCACGGTTATCTTTCAT
GCAGTATCTGAAGATTATTACTCTGGTGCAATTGTATCTTTGCCTGGTTCAACCGTTCCT
GTCAGTCCTGCCGAGTGTCTTATCAGTCCTGCCCTTGGTCCAAACCCCGGCTTTATAGTT
TACAATCATCATCAGAATGACGAAGGGGCTTCCCCCGAAGAACGAAAGATTCCATTTCTT
GCGAAGGATTTTGCTGAATGGATGGAAGCTTCGACATTGAAAATTGGCGACGAAGTAACG
TTCCGTGCGTGCATGGTTAAACGAACCGGCGCACAAAACGCAGTTGATATCCGAAAAACA
AAACTTGCTGTGCAACGCCAGAGATCAAATGCTGCTGAAGTTATTAGAAACATCATCAGT
AATCTTGCGCTGATCGAACCAACACCAACTTCTCCCAACAGTGAAACTGCCACAGCCTCC
TCTCCTCTGAAAACATCATTAACACCGCGTATCGCAATGCAATCATCACCTCAAAAAATC
ATACCATCCTTAGAAGACACTGCCATTCAAGCGCCTTCGTTCAAGCTAGACCCTGTCCCA
AAATCACAAGCTATGCGTAAAGTTTCTGCCCCAAACACTCCGAACAAGCTAACTCGGAGT
CCAAGCAACAACGTTACATCGCCAAACAAGAAAAATGCGGCTGCTTTAGAGAACACAGAG
AAATGTTATGGTTGGATAAGCACAGTCAAAGAAACGTTCGGTTTTATAGAACTCGCTGAC
CACAAGTCTGAAATTTTCTTCCACTTTAGCGAATTATGTGGTCCAGTTGAGAAATTTACA
GTTGGATGCTCAGTTAGTTTCATTGCTGGCGAAAAAGACGATAAGCCATGTGCTTTGCAA
GTTTCCATTACGGATGCAGTTACTGTGAATGATGTTAGTGAAACTAAACATATTGGTGTT
GTTGTTCGGGCTTTGAAGTCTTCAAACAATGATAAATCTGAATCCAGTTATCAGGGGAAA
ATACAATATAAACCAAATGAAGATTGTGATGAAATGCATGAGATCTCATTCACTCCTGTC
AGTCTGACTGACCGTAGAGAATTCCTACAAGTGGGCGACAATGTCACTTTTCAGGTGTCT
ACAAGTGGTGACAATTTACATGCCATGAATGTATCTGTGAAACGACCACTTATCCAAGCC
GCAGTTGAAAGTATTCGTGGTGATTATGGTTTTATCTCACATGAAATAGAAGGAAATGTG
AAGTTGTTCTTTCACATGTCGGAAGTACGAGATGGTTCAAAGAACATTCAAACTGGTTCA
GTTGTTGAATTTTCAGTTGTTCATAACCAGAGGACAGGTAAATACTCTGCTGCTAATATT
CATTGTGTGCAGTCAAAGAGACCAGAACGTTTGCGTATGAGAAGTGAAGGTTGTCGAGCA
ACTGTGACTGTTACTAGGCAACCAAAGGGACCCGCTGATAACGAGAAGGGATTCACATTG
GAAAGAAAAGTCCCACAAGAAGCATAATGACGAATTTAAGTTGAAATGGACAAAGTTTTA
GTTGCAATACAAAGCAAATGAGTTAACGCTGTTTAAGTTTATGCACAAGAAACCCGCTTT
TCGATGATGGCAATTTCACTGTTTTATACCAGCCTATAAGTTGCAGTAATCTGTTATGTT
TTTGAAGCGATTTATTGCATGCTATTTATTGTACAAATGTTACCAGTTATTTATGATTTC
GAGAACGCCGGCACGCTATAAAGTGTCTGTTAGCGATTTATGTTCTCTAGTTTTCCTGTT
CACAAGTATCTTTTTCTTCATAAGTTACCTTGTCAGCCTGCTGGATTGCCAATCAGCAAG
TCTGTATGTATTGCATTTACCTATTATTTTGGAAAACTTTTAAATGCGCAAGAATGCGCT
CAAATTTATGTTTAGTATTAATTTTGGTTACCACTGTTTGTCATAGAGTAGGTGCTGTAT
ATAGTAATTGGGTGGATCATATAAGTAAGGTCGCTGTGCCATGTTAAGTTGTTTTATTAC
GAAGTTACTACAACTGTAATGTACCACGTTATGTTTTTGATTTAGTGAATATTTATATTT
TGGTTTAAACTGCAATAAAAAAAAGTGAATTGTAAACA
| SUPERFAMILY |
NA-bd_OB-fold (IPR012340) - T[165-238] 9.43E-17 - T[342-410] 6.46E-15 - T[533-613] 2.52E-13 - T[832-901] 4.57E-12 - T[994-1059] 1.5E-11 |
| Pfam |
CSP_DNA-bd (IPR002059) - T[170-232] 2.9E-12 - T[346-404] 6.2E-15 - T[544-591] 3.5E-6 - T[840-898] 8.2E-8 - T[1002-1057] 3.6E-9 |
| SMART |
CSD (IPR011129) - T[170-233] 5.6E-12 - T[345-406] 4.1E-14 - T[543-608] 1.7E-4 - T[839-900] 0.3 - T[995-1059] 6.3E-5 |
| CDD |
CSP_DNA-bd (IPR002059) - T[180-232] 8.62253E-10 - T[355-405] 8.87233E-12 - T[849-899] 1.90187E-8 - T[1005-1057] 1.08981E-6 |
| ProSitePatterns |
Cold-shock_CS (IPR019844) - T[180-199] . - T[355-374] . - T[849-868] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CSDE1_HUMAN | 41.563 % | 356 | 3.0E-108 |