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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R1.3...'
  2. Transcript 'Cisavi.CG.ENS81.R442...'
  3. Transcript 'Phfumi.CG.MTP2014.S5...'
  4. Transcript 'Moocul.CG.ELv1_2.S71...'

Transcript Model

Transcript Id

Moocul.CG.ELv1_2.S71163.g04783.01.t

Possible name(s)

CIAO1; DAW1; EED

Location

S71163 [17,174 / 19,962]

Sequences

Amino acid sequence

Length: 426

>Moocul.CG.ELv1_2.S71163.g04783.01.p
MEELNGFEDDNSLFDNAEKPSAENFSDEDSVKSSQTTSSRGGHSRRGKQKARGKAQRKAN
PKSLFKFTNSLKEDHGKPLFGVSFNYFTSDDEPQMFAVVGSNRVTIYECHENGYIKLLQA
FEDPDHDENFYSVAWTLEKDTNIPLMAFAGSRGIIRVFNVQNKRCIKHYPGHGDAVNELK
FHPLLPHILCSASKDHSLRLWNINTDVLVCIFGGVEGHRDEVLSCDFDTFGNRMVSCGMD
HSLKIWRLDYPAVKLAVEASEKFVGSNSKEPFPTVLLHYPDFSTRDIHRNYVDCVRWHGD
FLVSKSCENHIVCWKPGFLESDIDNLKLMEKTNVTVLSRLQYQHCEIWYMRFAMDYNHKY
LALGSQYGKTFVWDLENMDWVKPKCVGLTTMRCTTSIRQTAFSRSGDILICVCDDATIWR
WDLQGK

Nucleotide sequence

Length: 1,667

>Moocul.CG.ELv1_2.S71163.g04783.01.t
CGAAATTCTAAACAGCAATAAACCATAGTTGACTATGAATAAACTGATTCTGATCATAGT
TGAGTTCTGATTCTGGTCAATATTTTGCCGACGTAAAGATTTGAGCAAACATTCCCACCC
ACCGTCCGTAAACATTCAGTACGCTATCTTGCGCTGTGTGCAGGCCTATCTGTTGCCACC
AACTCCCCGCTGAACATCTGAACATGGAAGAATTGAATGGTTTTGAAGATGACAATTCCT
TGTTTGATAATGCTGAAAAGCCATCGGCAGAGAATTTCTCAGATGAAGACTCTGTTAAAA
GTTCACAGACTACAAGTAGCAGAGGAGGACACTCTCGTCGTGGGAAGCAAAAAGCAAGAG
GAAAAGCTCAAAGGAAAGCCAACCCAAAGTCTTTATTCAAATTCACGAATTCCCTGAAGG
AAGATCATGGCAAGCCATTATTCGGAGTTAGTTTTAACTACTTCACGTCGGATGATGAAC
CACAGATGTTTGCCGTTGTCGGTAGCAACAGAGTTACCATTTATGAATGCCATGAGAACG
GATACATCAAATTATTGCAAGCATTTGAAGATCCTGATCATGACGAGAACTTTTACTCTG
TTGCGTGGACATTGGAAAAGGACACAAATATTCCATTAATGGCTTTCGCGGGATCTCGTG
GAATAATTCGAGTTTTTAACGTTCAAAATAAGCGCTGTATTAAACACTATCCGGGACATG
GAGACGCAGTAAATGAACTTAAATTCCACCCCTTACTCCCACATATATTGTGCAGTGCAT
CTAAGGACCATTCGTTACGTTTATGGAATATTAACACGGACGTTTTGGTGTGCATTTTTG
GGGGAGTTGAAGGTCACCGAGACGAAGTTTTAAGTTGCGACTTCGACACTTTTGGTAACC
GGATGGTGTCGTGCGGTATGGACCACTCCTTGAAAATATGGAGACTCGATTACCCAGCTG
TTAAGCTTGCTGTGGAAGCATCGGAAAAATTTGTTGGTTCAAACAGTAAAGAACCATTTC
CAACAGTCTTACTGCACTATCCAGATTTTTCAACTCGGGATATTCATAGAAATTACGTTG
ATTGCGTGCGATGGCATGGTGATTTTTTAGTGTCAAAATCATGTGAAAATCATATCGTTT
GCTGGAAACCTGGTTTTCTAGAATCGGATATTGATAATCTAAAACTGATGGAGAAAACTA
ACGTAACGGTATTAAGTCGCTTGCAATATCAGCATTGTGAAATTTGGTATATGCGTTTTG
CAATGGACTACAACCACAAGTACCTAGCACTTGGTAGTCAGTACGGTAAAACTTTTGTTT
GGGATCTTGAAAACATGGATTGGGTGAAGCCGAAATGTGTTGGCTTAACAACGATGAGAT
GCACGACTTCAATCCGACAGACCGCGTTCTCACGAAGTGGCGACATCCTCATTTGTGTAT
GTGATGACGCAACAATATGGCGCTGGGATTTGCAAGGAAAATAAAACTTTTTAATTTTTT
GAACATACTGTACTTGTTATTGTAGTGTTCATTTCCGTCAAAGCTGCTGTTTACTGCCAA
TTTTAAAGATTGTTTTGCTTTCATTTTCACTCAGAATTTTTTACAACATTTTCCTTGTCA
ACTTTTTTTATCAAATACACAAACACAATATCAATAACTAACTAGAA

InterProScan

PANTHER
Polycomb_EED (IPR037352) - T[28-423] 3.2E-146
Gene3D
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[60-423] 1.6E-117
SUPERFAMILY
WD40_repeat_dom_sf (IPR036322) - T[73-424] 8.75E-47
SMART
WD40_repeat (IPR001680) - T[114-159] 420.0 - T[162-202] 1.6E-7 - T[205-247] 4.0E-6 - T[278-315] 18.0 - T[333-374] 160.0 - T[384-422] 1.9
ProSiteProfiles
WD40_repeat_dom (IPR017986) - T[123-256] 19.486
Pfam
WD40_repeat (IPR001680) - T[164-202] 2.1E-6 - T[215-246] 1.2E-4
ProSiteProfiles
WD40_repeat (IPR001680) - T[169-205] 12.012 - T[215-249] 11.544
ProSitePatterns
WD40_repeat_CS (IPR019775) - T[189-203] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
EED_HUMAN 60.665 % 471 2.1E-165