- Clone 'mae45c11' >
- Transcript 'Moocul.CG.ELv1_2.S75...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S75938.g05387.01.t
Possible name(s)
PCDH1; PCDH11X; PCDH18
Gene model
Location
S75938 [2,178 / 5,913]
Amino acid sequence
Length: 948
>Moocul.CG.ELv1_2.S75938.g05387.01.p
MFINSFSCLFLPQIIELPAQQLLEMNLVVDDINDNYPIFPQKIIDISLHENFPIGETYNL
DAYLANDKDSAMNGKLQYTLTENPKIVLQEWAGNEGYHLQIQLIRSLDYEDAKEISLTLM
AHDGGMPAKSSSTTLRITIVDVNDNKPLFEQEKYTVTLKENQLPGHEVVTVQADDADSGD
LGQVQYYLSHRNNRHVMQLVSVHPQTGVVTLNEKLDRERDDGVRVIIAAKDSAPSSGERT
GETYLIINVEDVNDNAPVIHLNYVVSSDKNTAYVNENSAIGTYLLRVTVTDADKDVNGDV
SVVITSSKIQEDSSNKSEETYFKLNSNAFIETATELNREECNEYVVTITACDQGREQRCS
SLTLDVVVLDVNEYAPKFDVSTQRVVLREDVNVGITVASVHAEDRDAINGASLTTDSDDS
IVPAYNGLVTYNIIDGGRGVFEIDQESGRISLVRQLDREVQSEWKLKVLASDGGTPEPRK
TSCDVIIKVHDVNDNSPIFMNPSVNNSLVYATTSHDELITTFKAEDKDINENSKLQYKLL
LVESDEDKQNQPFMKSSFILNPTTGDLRLNFTKINVTHIIGLNNLHVQVCDSGTPKLCSA
MLLRVVVGTHVSGQRLSEASFGFQNILLLVGITGGVALVLVATIAVVILRCRKKRKQFAR
ERRNTKYNSRSEYSLEKDDHEPSRVSLGVEDESSIKRFQQENPEALDPETEMEMKNETSP
THGGNTRFLFPQANSKKISANSDGDSGRGDSEPDNAYFQAIPHNNDAPKRVSMCQGAIRV
LSLDEGHAGSTSSVSTVRDEKFYNWDKMKPRYYQSPPRHAKGECRTRYSASELIPNHHSH
YYENFMSPTPESGINRRYSTAVLPKDMMTMHSSNQMANYETHSVRSTCNSTCTENDSIES
RLIANNPSHNQQATTRETFQGPSGVLGKFGRSRRGALEQRNTINELLV
Nucleotide sequence
Length: 2,977
>Moocul.CG.ELv1_2.S75938.g05387.01.t
ATGTTCATCAACTCTTTTTCATGTTTATTTCTTCCACAGATCATCGAACTTCCTGCTCAG
CAACTTCTTGAGATGAATTTGGTGGTTGACGACATCAACGATAATTATCCGATATTTCCA
CAAAAAATCATCGACATTTCGTTGCACGAAAACTTTCCCATTGGAGAAACTTACAATCTT
GACGCTTATTTGGCAAACGATAAAGATTCAGCTATGAACGGAAAACTTCAATATACACTG
ACGGAAAATCCAAAAATTGTTTTGCAGGAATGGGCCGGTAACGAAGGCTACCATCTGCAG
ATTCAACTTATCCGAAGCCTAGACTACGAAGATGCGAAGGAAATATCTTTAACATTGATG
GCACACGACGGCGGAATGCCCGCCAAGTCATCATCAACCACATTACGAATTACCATCGTT
GACGTAAACGATAATAAACCTTTGTTCGAACAGGAGAAGTATACTGTGACCCTGAAAGAG
AACCAATTACCAGGACACGAAGTCGTGACTGTTCAAGCAGACGACGCAGATTCTGGAGAT
TTGGGACAAGTCCAATATTACTTGTCACACAGAAACAATCGTCACGTGATGCAACTTGTG
TCAGTCCATCCACAGACTGGAGTGGTCACTTTGAATGAAAAACTTGACCGGGAAAGAGAT
GACGGTGTTCGCGTGATAATTGCAGCAAAGGATTCCGCACCTTCCTCTGGCGAACGAACT
GGTGAAACATACCTCATCATTAATGTTGAAGATGTGAATGATAATGCGCCTGTCATCCAC
CTCAATTACGTTGTTTCATCCGACAAAAACACAGCATACGTCAACGAAAACTCCGCCATT
GGAACATATCTTTTACGAGTGACAGTAACCGATGCTGACAAAGACGTAAACGGCGACGTC
AGTGTTGTGATTACGTCATCAAAAATTCAGGAAGATTCGTCCAACAAAAGTGAAGAAACT
TATTTTAAACTTAATTCAAATGCATTTATTGAAACCGCCACCGAGTTGAATCGGGAAGAG
TGCAATGAATATGTTGTAACCATCACCGCATGTGATCAAGGCCGCGAACAAAGATGTTCA
AGTTTGACGTTGGATGTGGTCGTCTTAGACGTTAATGAATATGCACCCAAATTTGACGTT
TCTACACAAAGAGTCGTTTTACGTGAAGACGTCAACGTGGGGATAACCGTCGCCAGCGTA
CACGCAGAAGACAGGGATGCAATTAACGGAGCATCTTTAACAACCGACTCCGATGACTCA
ATCGTCCCAGCATACAACGGCCTTGTCACTTACAACATCATCGATGGAGGAAGAGGTGTC
TTTGAAATCGATCAAGAAAGTGGAAGGATATCACTTGTCAGGCAACTTGACCGCGAAGTT
CAAAGTGAATGGAAGTTGAAGGTTCTTGCATCGGATGGTGGAACACCAGAACCACGAAAG
ACTTCATGTGACGTCATCATAAAAGTTCATGATGTTAATGACAACTCCCCGATATTTATG
AATCCGTCAGTCAACAATTCGCTTGTCTATGCCACTACTTCACACGATGAGTTAATAACT
ACTTTTAAGGCTGAAGATAAGGATATAAACGAAAATTCAAAATTGCAATACAAACTTTTA
CTGGTGGAAAGTGATGAGGATAAGCAAAACCAACCGTTCATGAAAAGCAGCTTCATCTTG
AATCCAACCACAGGAGATTTGCGATTAAACTTCACCAAGATAAATGTTACTCATATCATT
GGACTCAATAATCTGCATGTGCAGGTCTGTGACTCGGGGACACCAAAACTCTGCTCAGCC
ATGCTTCTACGAGTGGTAGTTGGTACACATGTGAGTGGCCAACGATTGTCCGAAGCTTCT
TTTGGATTTCAAAACATTCTTTTGCTCGTTGGCATTACTGGGGGTGTGGCGCTGGTGTTA
GTCGCCACTATTGCTGTGGTCATATTAAGATGTCGAAAAAAGAGGAAACAGTTTGCAAGA
GAACGAAGAAATACTAAATACAACAGCAGATCTGAATATTCATTGGAAAAAGACGATCAT
GAACCAAGTCGCGTCTCATTGGGCGTAGAAGATGAATCCTCGATTAAACGTTTTCAACAA
GAAAATCCTGAAGCTTTGGATCCTGAAACTGAAATGGAAATGAAGAATGAAACATCGCCA
ACTCATGGTGGCAACACACGATTTTTGTTTCCCCAAGCAAATTCAAAGAAAATATCAGCG
AATTCGGATGGTGATAGCGGTAGAGGTGATAGCGAACCTGATAATGCTTACTTTCAAGCT
ATTCCTCATAATAACGATGCTCCTAAGCGTGTATCAATGTGTCAAGGCGCTATTCGAGTT
CTCTCTCTTGACGAAGGTCATGCTGGTTCAACGTCCAGTGTTTCAACAGTTCGGGATGAA
AAATTTTACAATTGGGACAAAATGAAACCACGCTACTATCAGTCACCTCCACGTCATGCT
AAAGGTGAATGCAGGACACGATACAGCGCAAGCGAGTTGATTCCGAACCATCATTCGCAT
TATTATGAAAACTTTATGAGTCCTACTCCTGAATCAGGAATAAACAGAAGATATTCAACT
GCTGTTTTGCCAAAAGACATGATGACGATGCATTCCAGCAACCAAATGGCAAATTATGAA
ACACATAGTGTCCGAAGTACATGTAATAGCACATGTACAGAAAATGACAGCATCGAAAGC
AGATTAATTGCAAATAATCCATCGCACAATCAACAGGCGACCACACGAGAAACATTTCAA
GGACCAAGTGGGGTGCTTGGAAAGTTTGGTCGATCACGAAGGGGCGCGTTAGAGCAACGA
AACACTATTAACGAGTTGTTAGTTTAGTTATTGCTATTGGTTTGATTTCTGCGTTACATT
CCACTGTTTCTCCATGTCTATAGTTTGCCTTTCACTGTGTTTCAGAAATATAATATTATT
CTCTTTAAATTTTTTCACGATGATACCGCAAAATCTC
| SUPERFAMILY |
Cadherin-like (IPR015919) - T[33-149] 2.14E-17 - T[137-264] 4.71E-24 - T[247-365] 3.71E-17 - T[366-504] 5.14E-23 - T[487-607] 4.28E-12 |
| Pfam |
Cadherin (IPR002126) - T[47-139] 8.5E-8 - T[154-250] 7.2E-16 - T[271-369] 3.5E-11 - T[415-489] 2.8E-13 |
| SMART |
Cadherin (IPR002126) - T[63-147] 2.3E-15 - T[171-257] 5.1E-18 - T[287-376] 8.7E-16 - T[413-497] 2.5E-22 |
| ProSitePatterns |
Cadherin_CS (IPR020894) - T[137-147] . - T[247-257] . - T[487-497] . |
| PRINTS |
Cadherin (IPR002126) - T[198-217] 3.7E-26 - T[265-294] 3.7E-26 - T[343-355] 3.7E-26 - T[357-376] 3.7E-26 - T[376-389] 3.7E-26 - T[446-472] 3.7E-26 - T[481-498] 3.7E-26 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PCDH1_HUMAN | 31.895 % | 232 | 3.03E-63 |
| PCD18_HUMAN | 27.857 % | 229 | 2.95E-62 |
| PC11X_HUMAN | 29.043 % | 228 | 1.62E-61 |