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TRANSCRIPT CARD

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  1. Clone 'ma323l03' > 
  2. Transcript 'Moocul.CG.ELv1_2.S76...'

Transcript Model

Transcript Id

Moocul.CG.ELv1_2.S76386.g05418.01.t

Possible name(s)

LARP6; LARP7; SSB

Gene model

Moocul.CG.ELv1_2.S76386.g05418

Location

S76386 [7,984 / 10,132]

Sequences

Amino acid sequence

Length: 459

>Moocul.CG.ELv1_2.S76386.g05418.01.p
MNVVSYSSKPCQGRPVYVPQQYYHVTSQGDRKHQSQINGATYYVHPPAHMAPYQTYGGVP
TYVYVPEPQLVYGASYHPQRKFSSSSRSYGSRKSSSSSQGYHSCYDSPSTRNSSSSDSDG
SLKLRRSNSGDSGIATSSAFGSDDDSDVIKTPEITKALEAIEEPLWTIEQDRQYWQAENR
SPPSYGSCFHIVKQLEFYLCDEYLAKDKYLLRQVRCKKGGYVSIKLLASFKKMKKLAQDW
ESLRSAIVRKSTKLVISEEGFRLRRIVSLSDELMKPRMLTSILAIRLSENFNSVDKVTSL
FRIFGDIGLVRILRPGKSIPTDLRNYATQVPDIGSSLCAVVDFDTADSAMAAVRVIKGRN
STEDENDTQDPNQEEYLKKLNNLPNLEDLRLALLGPRVRRTLYRQDREKSEQTENDKNET
KNITPQKSPSKRNPIIPTNVLRMPHGPSTDSTKHWIRKC

Nucleotide sequence

Length: 1,944

>Moocul.CG.ELv1_2.S76386.g05418.01.t
TTTTTTTACAGTTTTTGTTATAGTTAAGATAATATAGAAATGAATGTTGTGTCTTACTCT
AGTAAGCCTTGTCAAGGTCGACCTGTGTATGTTCCACAACAATACTATCATGTGACGTCA
CAAGGTGACCGGAAGCATCAATCACAGATTAACGGTGCCACGTATTACGTACATCCTCCA
GCACATATGGCACCGTACCAAACTTACGGTGGTGTGCCAACTTACGTGTACGTACCCGAA
CCACAGCTGGTATACGGAGCATCCTACCATCCTCAGCGTAAATTTTCATCCTCATCCAGA
AGTTATGGAAGCCGAAAATCAAGCAGCTCTTCACAAGGATATCATTCATGTTACGATTCT
CCATCCACGAGAAACTCAAGTTCGTCTGATTCGGATGGCAGTTTAAAGCTGAGACGAAGT
AATAGCGGCGATAGTGGAATCGCAACGTCGTCAGCATTTGGTTCAGATGATGATAGTGAC
GTCATAAAAACACCAGAAATAACAAAGGCCTTGGAAGCTATTGAGGAACCTTTGTGGACA
ATTGAACAAGACCGACAGTATTGGCAAGCTGAAAACAGGTCGCCTCCCAGCTATGGATCA
TGTTTCCACATCGTGAAACAACTTGAGTTTTATTTGTGTGACGAATACTTGGCCAAAGAT
AAATATTTACTTCGGCAAGTTCGTTGCAAGAAAGGAGGATATGTCAGCATCAAACTCCTT
GCCTCCTTCAAAAAGATGAAGAAACTTGCACAGGACTGGGAGTCGCTCAGGAGCGCCATC
GTACGGAAGTCAACCAAACTTGTGATCAGTGAGGAAGGATTCAGACTGAGGAGGATTGTG
TCGCTGTCTGATGAATTGATGAAACCGAGAATGTTGACTTCAATCCTGGCAATTCGACTT
TCGGAAAACTTTAACTCGGTTGATAAAGTGACGTCACTGTTCAGAATATTCGGCGATATT
GGTCTCGTCCGCATTTTGCGGCCAGGAAAAAGTATTCCAACAGATCTTCGAAATTACGCA
ACGCAGGTGCCGGATATTGGAAGCTCTTTGTGTGCAGTCGTTGATTTTGATACGGCTGAT
TCGGCGATGGCAGCAGTGCGAGTAATAAAGGGAAGGAATAGTACGGAAGACGAAAATGAC
ACCCAAGATCCAAACCAAGAAGAATATTTGAAAAAATTAAACAATTTGCCAAATCTTGAA
GATTTGAGGCTTGCATTGTTGGGGCCACGTGTAAGGAGAACACTTTATCGACAAGACAGA
GAAAAAAGTGAACAGACCGAAAATGACAAAAATGAAACAAAAAATATCACACCACAGAAA
TCTCCATCCAAAAGAAATCCAATAATTCCAACAAACGTTCTAAGAATGCCACATGGGCCA
TCTACCGATTCCACAAAACACTGGATAAGAAAATGCTAATTTTTTTAATGATAATTATAT
TATATATATTCTTTAGTTTTTTACTTGTAGAATTTTATACTGTGTGCGTGTGTGAAATAA
AGCTTATTTTATCAAAGCAATTTCGTTTTCTCCTTATACTCAATTTACATGTGCGCCACC
TTATTAGGCATCCACACTAAAACTAATTTTTGAGTTTGAGCTTGGTATTTTACTTTACAC
AAACGCAGATGTATATAAATATTGAGTTTATTTGGCACTTGCCAACAAGGGCTTTATGCC
AAAACACAGATGTTAAGTGCACCGTATACATTTACGTGTTGTCCTGATGAGGCGATGTTA
TTTTAGAGGGTGGCTAATAAGGTGGTTTATAAGCTGGCTTATTCGCACATGAAAACTGAG
TATTAATATAGAGATGGTTAACGTATAGTTTATAAACAGAATACAAGATACCAAATTACT
TTTGTTAATTTGTTGCATTTTAAGTCGAGGAATGATGATAGAAAAAATGTCACCTACTAT
AGTTTTAACAAACATTTTGGGACG

InterProScan

ProSiteProfiles
La_HTH (IPR006630) - T[181-273] 18.687
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[188-267] 1.54E-17
Gene3D
WH-like_DNA-bd_sf (IPR036388) - T[188-273] 1.1E-20
SMART
La_HTH (IPR006630) - T[191-266] 1.0E-18
Pfam
La_HTH (IPR006630) - T[191-247] 8.6E-18

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
LARP6_HUMAN 33.5 % 110 3.53E-26