Aniseed - Transcript Card

Transcript Model

Transcript Id

Moocul.CG.ELv1_2.S77140.g05506.01.t

Possible name(s)

RDH11; RDH12; RDH13

Gene model

Moocul.CG.ELv1_2.S77140.g05506

Location

S77140 [615 / 2,120]

Sequences

Amino acid sequence

Length: 285

>Moocul.CG.ELv1_2.S77140.g05506.01.p
MSETNSGSWVKSDIKLDGKTVIVTGANTGIGLETCIDMAQRGGKVIMACRNMERGEEAKK
TSVRNFTREVTAEEERLAILINNAGVMMCPQSKTADGFEMQMGTNHLGHFLLTNLLLDLI
KKSAPSRIVTMTSAAHETSYINQIYWDDINLENNYTPLLAYSQSKLMNMMFAKELDKRLH
GTDVTAYAVHPGAVKTGLQRHASDGAAGFFMRVVAFVARPFWKTPEHGAQTSIYCAIAPE
VLEQSGSYFMDCHLADHKMNPVAKDEEQNKRLWEISEEMVGFKKK

Nucleotide sequence

Length: 858

>Moocul.CG.ELv1_2.S77140.g05506.01.t
ATGTCGGAGACTAACAGTGGTTCGTGGGTGAAAAGTGATATTAAATTGGATGGCAAGACT
GTAATTGTAACGGGAGCAAATACTGGTATAGGACTTGAAACATGCATAGATATGGCACAG
AGAGGTGGCAAGGTCATAATGGCTTGTCGGAACATGGAAAGGGGTGAAGAAGCTAAGAAA
ACTTCCGTGCGAAACTTCACGCGTGAAGTTACCGCGGAGGAAGAACGACTTGCTATACTG
ATCAACAATGCTGGCGTAATGATGTGTCCTCAGTCCAAAACAGCAGACGGATTTGAAATG
CAAATGGGAACGAATCATCTTGGACATTTCCTGCTTACGAATTTATTGCTTGACCTCATC
AAAAAAAGTGCTCCAAGTCGAATAGTGACTATGACATCTGCTGCCCACGAGACATCTTAT
ATAAATCAAATATACTGGGATGATATTAACCTGGAAAATAATTATACGCCATTGTTGGCT
TACAGTCAAAGCAAACTTATGAACATGATGTTTGCTAAAGAATTGGACAAAAGGCTTCAT
GGTACTGACGTCACCGCATATGCCGTTCACCCTGGCGCGGTCAAAACAGGTCTTCAGAGG
CATGCGAGTGATGGTGCCGCGGGATTTTTCATGCGAGTGGTCGCATTCGTTGCCAGACCA
TTTTGGAAAACACCAGAGCATGGTGCACAAACCTCCATTTACTGCGCGATTGCTCCAGAA
GTATTGGAACAGTCAGGATCTTATTTCATGGATTGCCATTTGGCAGACCACAAGATGAAT
CCAGTTGCAAAGGATGAAGAACAAAACAAGCGTTTGTGGGAAATCAGTGAAGAGATGGTT
GGGTTTAAGAAGAAATGA

InterProScan

SUPERFAMILY	NAD(P)-bd_dom_sf (IPR036291) - T[16-255] 2.2E-49
PRINTS	SDR_fam (IPR002347) - T[20-37] 8.1E-11 - T[75-86] 8.1E-11 - T[120-136] 8.1E-11 - T[182-199] 8.1E-11
Pfam	SDR_fam (IPR002347) - T[59-143] 3.6E-9

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RDH11_HUMAN	46.233 %	244	4.11E-80
RDH13_HUMAN	45.215 %	225	2.44E-72
RDH12_HUMAN	44.147 %	237	3.13E-77