- Transcript 'Moocci.CG.ELv1_2.S43...' >
- Transcript 'Boleac.CG.SB_v3.S365...' >
- Transcript 'KH2012:KH.C12.624.v1...' >
- Transcript 'KH2012:KH.C9.9.v2.A....' >
- Transcript 'Moocul.CG.ELv1_2.S77...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S77703.g05620.01.t
Possible name(s)
LRP1; LRP2; SORL1
Gene model
Location
S77703 [116 / 1,875]
Amino acid sequence
Length: 381
>Moocul.CG.ELv1_2.S77703.g05620.01.p
MFILKESNDCVPRSNVCDSSNCSGCKEDHGWPNGVGFKCRIRGVVCVLPQQLVWDDVPDC
DGGIDRCFDVEDKLNVVDGWDLRFDEFAKFNTTRCFQCFDDETFVPRSAVCDGIIDCPDL
SDECVCQQNISDVCGRVVDLLHENITSFCRLGEFQCEDGECINRTKLCDGTSDCRNSEDE
SYSSCGGTKLCSKSTFDDKECRCDSYYQTCKKQMGVACDNVEQCAPYDGIINVRWHDEGF
PEDECIASCSNNPNYNYTCGTNDVKALRPAIGYFKCVPGAEVILKFDPESNYSFVYQPSD
KLFEMAKGWCDGVVHCNNSKDERNCSERFNCPAGDLISIERDVTCNGVDDCDNGEDETPA
LCGNEKFYCPSLGGQLVSIIQ
Nucleotide sequence
Length: 1,471
>Moocul.CG.ELv1_2.S77703.g05620.01.t
GTTCGCGTTGAATTATTGTTATTATTAAATGAAGATTGATTACTTGGAATGGATCATGCG
TCAATGATCTGGTTGCAGATCCACCTGGTCAAGGGCCAAGTTATTTTTTGGATTAAACCT
CAAGAAATTCCACAACGAACCTCTTAATATACCACAGGGTCCACACTTGACCATGTACAC
CGTGTCGCATTATCACCTCAATGTTCATTTTGAAGGAATCAAATGATTGTGTTCCACGAA
GTAACGTTTGCGATTCATCAAACTGTTCAGGCTGCAAGGAAGACCATGGATGGCCAAACG
GGGTTGGTTTCAAGTGCAGAATACGTGGAGTTGTTTGTGTTCTTCCTCAGCAGTTGGTTT
GGGATGACGTTCCAGATTGCGATGGAGGAATCGATCGATGTTTTGATGTTGAAGATAAAC
TTAATGTTGTGGATGGATGGGATCTTCGTTTTGATGAATTTGCGAAGTTCAACACGACAC
GATGCTTTCAATGTTTCGATGACGAAACTTTCGTTCCACGATCAGCAGTTTGTGACGGAA
TAATCGACTGTCCAGATTTATCGGATGAATGTGTTTGTCAGCAAAACATAAGTGATGTTT
GTGGAAGAGTTGTTGATCTTCTTCATGAGAACATCACATCATTCTGTCGCCTTGGAGAGT
TCCAATGTGAGGACGGAGAATGCATCAATCGAACAAAGTTGTGCGACGGAACTTCCGACT
GTCGCAACAGCGAAGATGAATCATATTCTTCTTGCGGTGGAACGAAACTGTGTTCAAAAT
CTACATTTGACGACAAGGAATGCAGGTGTGATTCGTACTACCAAACATGCAAAAAACAAA
TGGGCGTGGCATGTGATAATGTGGAGCAATGTGCGCCTTATGACGGCATCATTAATGTTC
GATGGCATGATGAAGGCTTCCCAGAAGACGAATGCATTGCATCTTGCTCAAATAATCCCA
ATTACAATTACACTTGTGGAACAAACGATGTTAAGGCATTGAGACCGGCAATTGGATATT
TTAAATGCGTTCCGGGAGCAGAGGTTATTCTGAAATTCGACCCAGAAAGCAATTATAGTT
TCGTGTACCAACCGTCCGATAAATTATTTGAAATGGCAAAGGGTTGGTGCGATGGTGTGG
TTCATTGCAATAATTCAAAAGACGAAAGGAATTGCTCGGAAAGATTTAATTGTCCTGCTG
GTGATCTCATAAGCATTGAACGAGATGTCACGTGTAATGGAGTGGATGACTGTGATAATG
GTGAAGATGAAACGCCAGCACTTTGTGGAAATGAGAAATTTTACTGTCCATCATTGGGTG
GGCAATTGGTGAGTATAATACAGTAACATGTTTAGTTTCAGGGATATATCAGCATCAGGT
CCTTTCTACTCATGCACTTTTGTACGCAGAAAGATGACATAATAAACTTTCCAAAAACAT
TTTTAATTATCAAAATTGGTTGAGAATTAAA
| PRINTS |
LDrepeatLR_classA_rpt (IPR002172) - T[8-29] 6.7E-15 - T[45-66] 6.7E-15 - T[102-123] 6.7E-15 - T[159-180] 6.7E-15 - T[336-357] 6.7E-15 |
| SMART |
LDrepeatLR_classA_rpt (IPR002172) - T[91-128] 0.048 - T[148-187] 7.3E-8 - T[324-364] 0.0058 |
| SUPERFAMILY |
LDL_receptor-like_sf (IPR036055) - T[91-126] 9.56E-6 - T[146-182] 4.06E-9 |
| ProSiteProfiles |
LDrepeatLR_classA_rpt (IPR002172) - T[96-127] 8.575 - T[148-186] 12.488 - T[324-363] 9.288 |
| Pfam |
LDrepeatLR_classA_rpt (IPR002172) - T[149-185] 2.2E-9 |
| CDD |
LDrepeatLR_classA_rpt (IPR002172) - T[149-180] 7.14314E-6 |
| ProSitePatterns |
LDLR_class-A_CS (IPR023415) - T[161-185] . |
| Protein Name | Identity | Bit Score | e-value |
|---|