- Transcript 'Moocul.CG.ELv1_2.S79...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S79490.g05798.02.t
Possible name(s)
COMP; THBS3; THBS4
Gene model
Location
S79490 [11,249 / 19,692]
Amino acid sequence
Length: 739
>Moocul.CG.ELv1_2.S79490.g05798.02.p
HLWSDVAQINSIDNETVISDLTSVLQEIHSALKAQTTESKELRLAVQRCAICSSSPPSFS
LPRERTVEQAFHSRAEEVAPQAEINVQECSTNPCFPGVNCTDTDAGFVCGECPEGFAGNG
TYCSDANECGVNDPCSAIAGCENTPGGYFCNPCPSGFLQTFQEQYSNGLFIQKQICTDID
ECFTEAPVCVQNSQCINTQGSFTCGGCLPGYVGNQTHGCRKSRECEDGRLNPCHEHANCL
VINKGKDYACECEVGFAGNGFTCGTDTDLDGYPDDNLPCSEKKCIMDNCPSVPNSGQEDY
DQDGIGDACDSDADNDGIINDHDNCILKENSFQQNTDTDEFGDACDNCPNANNPKQDDSD
QNGEGDVCDNDIDGDGISNDIDNCPMVPNHSQDDADGDTVGDACDNCPNLINPLQLDTDE
DWLGDSCDNDLDSDGDGIQNDQDNCPTVINSDQLDTDNDGIGDLCDEDDDGDGVPDYGGI
MGNDNCRLIHNPNQIDSDRNGVGDVCEGDQDGDGVSDWKDACPFNSDVRLTDFRAFKTVS
LEPISDETILPFWTTHNEGREIVQSKNSDPGLAIGLSTFNGVDFSGTFFVNTAADDDYAG
FLFSYQSNRKFYVVMWKQTQQEFWLKTPFQAVVNSETGPGEVLRNALWHSKDSPNQVRLL
WSDPVSAGWKDKTAYRWSLKHRPEHGYIRIQFYEGNILIADTGRIIDKTIRGGKLGVFCF
SQEDVIWSNLRYSCNETEN
Nucleotide sequence
Length: 2,220
>Moocul.CG.ELv1_2.S79490.g05798.02.t
CACCTTTGGAGTGATGTTGCGCAGATCAATTCCATTGACAATGAAACTGTCATTTCAGAT
TTGACATCGGTTCTACAGGAAATACATTCAGCATTAAAGGCTCAAACCACGGAATCAAAA
GAACTAAGATTGGCCGTGCAAAGATGCGCCATATGCTCATCAAGCCCTCCATCGTTTTCT
CTTCCTCGTGAAAGAACAGTTGAGCAAGCCTTTCACAGTCGTGCAGAAGAAGTTGCGCCT
CAAGCCGAGATCAATGTACAGGAGTGTTCAACCAACCCATGTTTTCCGGGAGTGAATTGT
ACGGACACAGATGCCGGATTTGTTTGTGGAGAATGTCCAGAGGGTTTTGCGGGAAATGGC
ACATACTGCAGTGACGCAAACGAATGTGGTGTGAATGACCCTTGTTCTGCGATTGCCGGA
TGCGAAAATACACCAGGTGGTTATTTTTGCAATCCCTGTCCATCTGGATTCCTTCAGACC
TTTCAAGAACAATATTCCAATGGCCTATTTATCCAGAAGCAAATCTGCACTGATATCGAC
GAATGCTTTACTGAAGCTCCCGTTTGCGTTCAAAATTCTCAATGCATAAACACCCAAGGT
TCCTTCACCTGCGGCGGTTGTCTCCCTGGTTACGTTGGTAATCAAACACATGGATGTCGA
AAATCTCGAGAATGCGAAGATGGGCGTTTGAATCCTTGTCACGAACATGCCAACTGCCTC
GTTATTAACAAAGGGAAAGATTACGCGTGTGAGTGCGAAGTTGGTTTTGCTGGTAACGGT
TTCACTTGTGGAACAGATACAGATTTGGATGGATATCCCGATGATAATCTTCCTTGTAGT
GAAAAGAAGTGTATAATGGACAATTGCCCGTCGGTTCCGAACAGTGGACAGGAGGATTAC
GACCAGGACGGAATCGGCGATGCATGTGATTCGGACGCGGACAATGACGGAATAATAAAC
GACCATGACAACTGTATACTGAAGGAAAATTCCTTCCAGCAGAACACTGATACTGATGAA
TTTGGAGATGCCTGCGATAATTGTCCGAACGCAAATAACCCTAAACAAGACGACAGCGAT
CAAAATGGCGAAGGCGATGTTTGCGATAATGACATAGATGGAGATGGAATATCAAACGAT
ATTGACAATTGTCCCATGGTTCCCAATCACTCGCAGGACGACGCTGATGGCGATACAGTG
GGCGATGCCTGTGATAATTGTCCCAATCTCATCAACCCGCTGCAGCTGGACACCGACGAA
GATTGGCTCGGTGATTCCTGTGACAATGACCTGGATTCCGACGGTGATGGAATTCAAAAC
GACCAAGACAATTGTCCGACCGTCATTAACAGTGACCAGCTAGATACAGACAATGACGGA
ATAGGCGATCTTTGCGACGAGGATGATGATGGGGACGGTGTGCCGGATTACGGGGGAATA
ATGGGCAACGATAACTGCCGTCTTATACACAATCCCAATCAAATTGACTCCGACAGGAAT
GGCGTGGGGGATGTGTGCGAAGGAGACCAGGATGGGGATGGGGTCAGTGACTGGAAGGAC
GCGTGTCCGTTTAACAGCGATGTACGATTGACCGACTTTCGGGCGTTTAAAACCGTCAGT
TTGGAACCAATAAGCGACGAGACCATTTTGCCTTTCTGGACGACCCACAACGAAGGACGA
GAAATTGTACAGTCGAAGAATAGCGACCCAGGACTCGCGATTGGTCTTTCAACTTTCAAC
GGAGTGGACTTCAGTGGTACATTCTTCGTGAACACAGCGGCCGATGATGATTATGCTGGT
TTCTTATTCAGTTATCAAAGCAACCGGAAGTTCTATGTTGTCATGTGGAAACAAACCCAA
CAGGAGTTCTGGTTAAAAACACCATTTCAGGCAGTTGTGAACTCTGAAACCGGACCAGGG
GAGGTATTGCGAAATGCTCTTTGGCATTCAAAGGATTCCCCAAACCAAGTTCGATTGTTA
TGGTCTGATCCGGTTAGCGCTGGATGGAAGGACAAGACGGCATATAGATGGTCTTTGAAA
CATCGGCCTGAACATGGCTATATCAGAATACAATTCTACGAGGGTAACATACTGATCGCC
GACACTGGACGAATAATCGATAAAACTATACGAGGAGGAAAATTGGGAGTGTTTTGCTTT
AGTCAAGAAGATGTTATTTGGTCAAATTTGCGATATTCGTGTAATGAGACAGAAAATTAA
| PANTHER |
Thrombospondin (IPR037349) - T[18-737] 0.0 |
| SUPERFAMILY |
Growth_fac_rcpt_cys_sf (IPR009030) - T[85-226] 3.77E-6 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[85-124] 7.2E-4 - T[125-163] 4.8E-4 - T[178-220] 8.1E-10 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[85-124] 10.888 - T[178-217] 7.422 - T[221-264] 11.83 |
| SMART |
EGF-like_dom (IPR000742) - T[88-124] 0.0022 - T[128-177] 42.0 - T[181-220] 0.032 - T[224-264] 0.0028 |
| Pfam |
EGF-like_Ca-bd_dom (IPR001881) - T[125-158] 1.8E-4 - T[178-217] 4.7E-9 |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[178-204] . |
| Gene3D |
TSP_type-3_rpt (IPR028974) - T[242-345] 1.4E-20 - T[346-404] 1.0E-18 - T[405-531] 4.7E-41 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[250-263] . |
| SUPERFAMILY |
TSP_type-3_rpt (IPR028974) - T[258-346] 9.81E-12 - T[334-408] 1.18E-13 - T[403-528] 2.35E-30 |
| ProSiteProfiles |
Thrombospondin_3_rpt (IPR017897) - T[265-297] 10.973 - T[298-333] 16.166 - T[334-356] 10.572 - T[357-392] 16.659 - T[393-415] 11.666 - T[416-453] 14.816 - T[454-494] 12.505 - T[495-530] 14.171 |
| Pfam |
Thrombospondin_3-like_rpt (IPR003367) - T[298-331] 1.2E-8 - T[358-392] 2.4E-12 - T[417-453] 6.5E-8 - T[455-494] 2.0E-7 - T[496-528] 1.5E-11 |
| SUPERFAMILY |
ConA-like_dom_sf (IPR013320) - T[531-736] 1.04E-85 |
| ProSiteProfiles |
Thrombospondin_C (IPR008859) - T[534-739] 87.563 |
| Pfam |
Thrombospondin_C (IPR008859) - T[551-736] 3.7E-82 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TSP4_HUMAN | 53.951 % | 706 | 0 |
| TSP3_HUMAN | 54.116 % | 704 | 0 |
| COMP_HUMAN | 52.459 % | 693 | 0 |