Aniseed - Transcript Card

Transcript Model

Transcript Id

Moocul.CG.ELv1_2.S81580.g06033.01.t

Possible name(s)

RDH11; RDH12; RDH13

Gene model

Moocul.CG.ELv1_2.S81580.g06033

Location

S81580 [26,981 / 28,463]

Sequences

Amino acid sequence

Length: 290

>Moocul.CG.ELv1_2.S81580.g06033.01.p
MSCKKYSQKLTSYASVLTGFVNPEIKMKGKTVLITGANKGIGLETAKNLAQRDARVILAC
RDKEKAEYARDEILQVCLKPYVLINNAGAPISKEQYTQDGIEMQFGVNHVGHFLLTNLLL
PRMKESNSGRIVVVSSMAHDCGKDIDWINFKSDKKYDPIEAYAQSKLANVLFMKELSYRL
QGTGVTCNAVNPGCAETDFWTTIEDSYKNSCYLWRKILSWGISCAKKHAMKPVSSAAQTS
VFCAVAPELENVSGVYFSDCNIGKESKVAQNAEAGMKLWEASEKWVDMQF

Nucleotide sequence

Length: 873

>Moocul.CG.ELv1_2.S81580.g06033.01.t
ATGAGTTGCAAAAAATATTCGCAGAAATTAACGTCGTATGCTTCAGTATTGACCGGATTT
GTCAACCCTGAAATCAAAATGAAAGGAAAGACAGTTCTAATAACTGGTGCAAATAAAGGC
ATTGGATTGGAAACTGCAAAGAATCTCGCTCAACGAGATGCTCGCGTTATTCTTGCTTGC
AGAGACAAAGAGAAGGCGGAATATGCAAGAGATGAAATTTTACAGGTTTGTTTGAAACCA
TATGTTTTGATCAACAATGCCGGCGCACCAATCAGTAAAGAGCAGTACACACAGGATGGC
ATTGAAATGCAGTTTGGTGTGAATCATGTCGGGCATTTCCTGCTCACAAATCTTCTGCTT
CCACGAATGAAGGAGTCGAATTCCGGAAGAATCGTCGTCGTTTCCTCCATGGCTCACGAT
TGTGGGAAAGACATCGATTGGATAAACTTTAAAAGTGACAAGAAATATGATCCGATTGAA
GCGTATGCTCAAAGCAAACTCGCCAATGTTCTGTTCATGAAGGAATTGAGTTATCGTTTG
CAAGGAACCGGCGTCACTTGCAATGCAGTCAATCCAGGTTGTGCTGAAACTGACTTCTGG
ACCACCATCGAAGATTCTTACAAGAATTCGTGTTATCTGTGGCGAAAGATACTTTCATGG
GGTATTTCCTGTGCAAAAAAACACGCAATGAAGCCCGTGTCATCCGCCGCACAAACATCT
GTGTTCTGTGCCGTTGCACCAGAACTAGAAAACGTGTCAGGAGTTTACTTCTCTGATTGC
AACATTGGAAAGGAATCGAAAGTCGCACAAAATGCTGAGGCTGGAATGAAACTTTGGGAG
GCTTCGGAGAAATGGGTTGATATGCAGTTTTAA

InterProScan

SUPERFAMILY	NAD(P)-bd_dom_sf (IPR036291) - T[27-262] 1.97E-48
Pfam	SDR_fam (IPR002347) - T[30-74] 1.3E-8 - T[82-205] 5.6E-17
PRINTS	SDR_fam (IPR002347) - T[31-48] 1.1E-17 - T[78-89] 1.1E-17 - T[123-139] 1.1E-17 - T[162-181] 1.1E-17 - T[183-200] 1.1E-17

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RDH11_HUMAN	40.476 %	181	3.71E-55
RDH13_HUMAN	42.034 %	174	1.78E-52
RDH12_HUMAN	41.98 %	178	2.48E-54