- Transcript 'KH2012:KH.C14.259.v1...' >
- Transcript 'Moocci.CG.ELv1_2.S47...' >
- Transcript 'Haaura.CG.MTP2014.S8...' >
- Transcript 'KH2012:KH.C9.606.v1....' >
- Transcript 'Moocul.CG.ELv1_2.S82...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S82725.g06190.01.t
Possible name(s)
NVL; SPATA5; VCP
Gene model
Location
S82725 [14,148 / 16,755]
Amino acid sequence
Length: 868
>Moocul.CG.ELv1_2.S82725.g06190.01.p
MDHKLTTRVVSYMASNPYVDVAIMASDLQLKYSRDYGRRKKNAFKKLVNEIYEMQKYKTN
VKKRFAEVKLDERALKIQKQNSLKNMKEDSEAEFINYKDTNLMNVSLSSMYNADISGNNT
PLKLTPLGKTYNYDEDHLENVAIPFKHKEKTANKRTLPEIQNISFDNDTSISEIISNSSE
PQEESLQNAAISQQTKKSNPNTPKRRKSINLQKNGNSQNNMDNEIVKEINSLRKSKFKFE
ESKITFKNVGGNEKTLNEVCKLLIHIKHPEVYKTLGVTPPHGMLLHGPPGCGKSLLANAI
AGELEIPVLKLAGPEIVSGISGESEQKLRDVFETANENTPCIIFIDEIDAIAPKRENASK
EQERRIVAQLLSCMDDLSDGGEQVLIIGATNRPDSLDPGLRRAGRFDREICMGIPSEKAR
EDILKVLCKDLKLQESFNFSLTARLTPGYVGADLLSLCREAAASAVSRILTKERNEKSTE
TNTECDKNEPSTATEESNTTPAEEVSNESPNGADAGQKENKSKSSNNLANNDGNKDIKIE
ELTTDVMLNWIKNPNTLTQEELNDLNITMEDFEVAMKVVQPSAKREGFATVPDVTWDDIG
ALKEIRQELSMAILAPVRNPDVFKELGLEKPSGVLLAGPPGCGKTMLAKAIANESGINFI
SVKGPELLNMYVGESERAVRQCFQRAQNSSPCVIFFDELDSLCPRRSGVDTGSSARVVNQ
MLTEMDGLQSRKQVFVMGATNRPDIIDPAILRPGRLDKILHVDLPTKTDRYEILEAITKY
GTRPKLSPELSLVDVANDKRCDGFTGADLSALVREASVNALKKYISQEHVLKGQTAIVFV
TWDNFENAFKKVKPSVSAEDKLSYLSTK
Nucleotide sequence
Length: 2,607
>Moocul.CG.ELv1_2.S82725.g06190.01.t
ATGGACCATAAGTTGACCACTCGTGTTGTAAGTTATATGGCAAGTAATCCATATGTTGAC
GTTGCCATTATGGCATCAGATTTGCAACTGAAATATTCAAGAGATTACGGACGTCGAAAG
AAGAATGCATTTAAAAAATTGGTAAATGAAATTTATGAAATGCAAAAATATAAAACAAAT
GTTAAAAAGCGGTTTGCTGAAGTGAAACTGGACGAAAGAGCATTAAAAATACAGAAACAA
AATTCTTTAAAAAATATGAAAGAAGATTCGGAAGCAGAATTCATTAATTACAAGGACACA
AACTTGATGAATGTTTCATTGTCGTCCATGTATAATGCTGATATCTCCGGAAATAATACA
CCATTAAAACTTACACCACTGGGAAAAACTTACAATTATGATGAAGATCACTTGGAAAAT
GTTGCGATTCCGTTTAAACACAAAGAGAAAACTGCTAATAAAAGAACGTTACCTGAAATA
CAAAATATATCATTTGATAACGATACAAGTATTAGCGAAATAATAAGTAATTCAAGTGAA
CCACAAGAAGAAAGTTTACAGAATGCAGCAATTTCACAACAAACAAAGAAATCAAACCCA
AACACACCAAAAAGAAGAAAGTCGATAAATTTACAGAAGAATGGTAATAGTCAAAATAAT
ATGGACAATGAAATCGTAAAGGAAATAAATAGCTTGCGAAAAAGTAAATTTAAATTTGAA
GAAAGTAAAATTACTTTTAAAAATGTTGGTGGCAATGAAAAGACTCTAAATGAAGTATGT
AAATTGCTGATACATATAAAACACCCAGAAGTTTATAAAACACTTGGTGTAACACCGCCG
CATGGAATGTTGCTACATGGACCACCGGGATGCGGTAAAAGTCTTCTTGCAAATGCAATA
GCAGGAGAATTAGAAATACCGGTACTAAAATTGGCTGGACCTGAAATTGTAAGTGGAATA
TCAGGTGAAAGTGAGCAGAAACTGCGAGACGTGTTTGAAACGGCGAATGAAAATACTCCT
TGTATTATTTTTATTGATGAAATCGATGCTATTGCTCCAAAACGAGAAAATGCATCGAAA
GAACAAGAAAGGAGAATTGTTGCGCAATTATTATCATGCATGGATGATCTCAGTGACGGT
GGAGAACAAGTGTTAATAATTGGTGCAACTAATCGACCCGATTCATTGGATCCTGGACTC
AGAAGAGCAGGCAGATTCGATCGAGAAATATGTATGGGAATTCCAAGTGAAAAAGCTCGT
GAAGATATTTTGAAAGTTTTATGTAAGGATTTAAAACTTCAAGAAAGTTTTAATTTTTCT
CTTACTGCAAGACTGACACCTGGTTATGTGGGTGCAGATTTACTTTCACTGTGTCGTGAA
GCCGCTGCATCAGCTGTATCTAGAATATTAACTAAAGAAAGAAACGAAAAATCTACAGAA
ACGAACACTGAATGTGATAAAAATGAACCATCGACGGCGACAGAGGAATCTAACACCACA
CCAGCAGAGGAAGTAAGTAATGAATCACCTAATGGAGCTGATGCAGGACAAAAAGAAAAC
AAAAGTAAATCATCTAATAATTTAGCAAATAATGATGGAAACAAAGATATCAAAATTGAA
GAATTAACAACTGATGTGATGTTAAATTGGATCAAAAACCCAAATACATTAACACAAGAA
GAACTGAATGATTTAAATATAACGATGGAGGATTTCGAAGTGGCCATGAAAGTTGTTCAG
CCTTCTGCTAAGCGAGAAGGATTTGCCACAGTTCCTGATGTTACATGGGATGATATTGGT
GCACTGAAAGAGATAAGACAAGAGCTTAGTATGGCCATACTTGCACCTGTAAGAAACCCT
GATGTGTTTAAGGAGCTTGGACTGGAAAAACCATCCGGTGTGCTATTAGCTGGCCCTCCA
GGATGCGGTAAAACAATGCTTGCAAAGGCAATTGCGAATGAATCCGGTATTAATTTTATA
TCAGTAAAAGGCCCGGAACTACTAAACATGTATGTTGGTGAAAGTGAGAGAGCAGTAAGA
CAATGCTTCCAGAGAGCACAAAACTCATCACCATGTGTCATATTCTTTGATGAACTTGAC
TCTCTTTGTCCAAGAAGAAGTGGGGTTGACACTGGATCTTCTGCAAGAGTTGTAAATCAG
ATGCTCACTGAAATGGATGGGTTACAATCAAGAAAACAAGTCTTTGTGATGGGTGCTACA
AACCGACCAGACATTATTGACCCAGCAATATTACGACCTGGACGATTAGACAAAATTTTG
CATGTCGATTTACCAACAAAAACAGATCGATATGAAATATTAGAAGCAATAACAAAATAT
GGAACGCGGCCTAAACTATCGCCGGAGCTCTCATTGGTAGACGTTGCAAATGATAAACGA
TGTGATGGATTTACAGGAGCGGATTTATCAGCTCTTGTTCGGGAAGCTTCGGTGAATGCA
CTCAAGAAATACATTTCACAAGAACATGTTCTGAAGGGACAAACTGCGATTGTTTTTGTA
ACATGGGACAACTTTGAAAATGCATTTAAAAAAGTGAAACCTTCAGTATCTGCTGAAGAT
AAACTATCTTATCTATCAACGAAATAA
| Gene3D |
NLV2_N_sf (IPR038100) - T[1-63] 1.3E-16 |
| Pfam |
NVL2_nucleolin-bd (IPR031996) - T[2-54] 3.2E-15 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[243-468] 4.57E-58 - T[538-586] 4.57E-58 - T[592-860] 1.83E-65 |
| SMART |
AAA+_ATPase (IPR003593) - T[279-416] 3.5E-23 - T[630-766] 2.3E-22 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[283-412] 5.9E-44 - T[634-763] 9.5E-48 |
| ProSitePatterns |
ATPase_AAA_CS (IPR003960) - T[734-752] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPAT5_HUMAN | 43.648 % | 253 | 9.06E-72 |
| TERA_HUMAN | 49.621 % | 261 | 3.92E-75 |
| NVL_HUMAN | 50.617 % | 833 | 0 |