- Transcript 'Cisavi.CG.ENS81.R219...' >
- Transcript 'Moocul.CG.ELv1_2.S82...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S82950.g06218.01.t
Possible name(s)
ITGB3; ITGB5; ITGB6
Gene model
Location
S82950 [22,944 / 34,659]
Amino acid sequence
Length: 732
>Moocul.CG.ELv1_2.S82950.g06218.01.p
MAVPGCAWCEDPKYANNPNIVISRCNMLDVLVKDQCPLDRIINPASTFEPTLDNPHSNVG
ESAVGKATQLKPQIITADLRPGMPVSLNISYKQAEDYPVDLYYLLDLSHSMKDDLESLRK
LGKRLGESMSSITRDFRLGFGSFVDKTVMPYISMVPNKLKNPCNDQDPCVPAYSFSNDLP
LTANLDAFTSSVNNVSYSSNLDAPEGGFDAMMQAIVCKNQINWRKDATHLLVYSSDAVFH
YAGDGKLGGIVIPNDDATHLLVYSSDAVFHYAGDGKLGGIVIPNDGECYLDTDGRRYTMA
NEMNKHNLALFLAKFRSLYLLLGDYDLNDKLKLLNGLSANFNVKILNLCCVVIFFEFVLC
RNLQLHEMIPKSAVGELSGDSSNVIDLIKEAYENLKGQIVLKVTAPEGIVVEGKQSHCKS
GMVDGALECDGVQLGDIVRNGVYDCGACVCQPGYLGLDCSCDKKDIVGVESYLKNCTQPG
SEKVCSERGECLCGLCVCSPASDRKIYGKFCQCDDASCDRYNRKMCNGHGRCDCGNCICD
DEWKGDRCECTQDQSGCIDPGRTDAIACEGAGACVCGECQCNVTKNGLQYRGTYCEISPS
QLCEIHKDCVLCKAYGTGNVTACDEQCTQYTVTLLEGTASKLRSTCRVVDDSNDCSVTFY
FEKNGDKINIETDVSTQVCPVIMNPMFFIIGIIAAIVGIGLAILLIWKLWTSIKDAREYK
QWEKDVQKAKWE
Nucleotide sequence
Length: 2,246
>Moocul.CG.ELv1_2.S82950.g06218.01.t
ACGCGAAAAACATCTGCGAAGAAAGCAACGCCAAATCATGTTCAGAATGTATGGCAGTGC
CGGGATGTGCGTGGTGTGAAGATCCTAAATATGCGAACAATCCCAATATTGTAATATCAC
GCTGCAATATGCTTGACGTTTTGGTGAAGGACCAATGCCCACTCGATAGAATCATAAACC
CAGCTTCAACATTTGAACCAACACTTGACAATCCTCACTCAAATGTTGGGGAATCCGCCG
TTGGTAAAGCAACACAATTAAAACCACAAATTATAACAGCCGACCTTCGACCTGGAATGC
CGGTTTCGTTGAATATTTCATACAAACAAGCAGAAGATTATCCTGTGGATTTGTATTACT
TGCTCGATCTCTCACATTCCATGAAAGACGATTTAGAATCTCTCAGGAAGCTTGGAAAAC
GTTTGGGAGAGAGCATGTCTTCTATTACTCGAGATTTTAGGCTTGGTTTTGGATCGTTTG
TTGACAAAACCGTTATGCCTTACATTTCAATGGTTCCAAACAAATTGAAAAATCCTTGCA
ATGATCAAGACCCATGTGTTCCAGCGTACAGTTTCAGCAACGATCTTCCATTAACCGCCA
ACCTCGATGCTTTCACTTCGTCCGTCAACAATGTATCCTACTCGTCAAATTTAGATGCAC
CCGAAGGTGGCTTCGATGCCATGATGCAAGCGATTGTATGCAAGAACCAAATCAATTGGC
GTAAAGATGCGACACATTTGCTAGTGTACTCGAGTGACGCTGTCTTCCATTATGCCGGTG
ATGGTAAACTTGGTGGTATAGTGATTCCTAACGATGATGCGACACATTTGCTAGTGTACT
CGAGTGATGCTGTCTTCCATTATGCCGGTGATGGTAAACTTGGTGGTATAGTGATTCCTA
ACGATGGTGAATGTTACCTGGACACGGACGGACGAAGATATACCATGGCAAATGAAATGA
ACAAGCACAACTTGGCGTTATTCTTGGCCAAATTCCGGTCGTTATACTTGCTTTTGGGAG
ACTACGATTTGAACGATAAATTAAAACTTTTGAATGGATTATCAGCAAATTTCAATGTTA
AAATTTTGAATTTGTGTTGTGTCGTAATCTTTTTTGAATTTGTGTTGTGTCGTAATCTTC
AACTTCACGAAATGATCCCGAAATCTGCCGTTGGCGAATTGTCCGGAGATTCATCCAACG
TCATCGATTTAATCAAAGAAGCTTACGAGAATCTTAAAGGACAGATTGTACTAAAGGTGA
CGGCGCCAGAAGGAATTGTTGTTGAAGGTAAACAATCTCACTGCAAAAGTGGAATGGTCG
ATGGAGCTCTCGAATGTGATGGAGTGCAGTTGGGAGACATTGTAAGAAACGGTGTATACG
ATTGCGGGGCTTGTGTTTGTCAACCGGGGTACTTGGGATTGGATTGCTCTTGTGATAAAA
AGGACATAGTTGGTGTTGAATCGTACTTGAAGAACTGCACGCAGCCGGGATCGGAGAAAG
TTTGCAGTGAGAGAGGAGAATGTTTGTGTGGACTCTGTGTTTGCTCACCTGCTTCAGATC
GTAAAATCTATGGAAAATTCTGCCAATGTGATGATGCTTCGTGTGATCGATACAACAGAA
AGATGTGCAATGGGCATGGCAGGTGCGATTGTGGCAATTGCATATGCGATGACGAATGGA
AAGGCGACCGATGTGAATGTACGCAGGATCAAAGTGGATGCATCGATCCCGGCAGAACAG
ATGCAATTGCTTGTGAAGGTGCTGGTGCATGCGTTTGTGGGGAATGCCAATGTAACGTAA
CTAAGAACGGCTTACAATATCGTGGCACATACTGCGAGATATCGCCTTCACAATTGTGTG
AGATCCACAAGGACTGTGTTCTATGCAAAGCTTACGGGACTGGAAATGTAACAGCGTGCG
ATGAACAATGTACACAATATACCGTCACATTGCTTGAAGGAACCGCATCCAAACTTCGTA
GTACTTGCCGTGTTGTTGACGATTCCAATGATTGTTCGGTTACTTTCTACTTTGAAAAAA
ACGGTGACAAGATAAACATCGAGACCGATGTTAGCACACAAGTGTGTCCTGTGATCATGA
ATCCAATGTTCTTTATAATCGGTATTATCGCTGCCATTGTTGGTATTGGTCTGGCCATCT
TGTTGATCTGGAAGTTATGGACATCCATCAAGGATGCAAGGGAGTACAAACAATGGGAGA
AAGATGTGCAGAAGGCCAAATGGGAA
| PIRSF |
Integrin_bsu (IPR015812) - T[1-260] 1.8E-104 - T[255-316] 2.8E-16 - T[359-440] 6.2E-13 - T[438-732] 2.5E-69 |
| SMART |
Integrin_bsu_VWA (IPR002369) - T[2-461] 4.9E-113 |
| PRINTS |
Integrin_bsu (IPR015812) - T[25-44] 1.5E-70 - T[69-82] 1.5E-70 - T[97-115] 1.5E-70 - T[137-156] 1.5E-70 - T[169-188] 1.5E-70 - T[202-224] 1.5E-70 - T[229-244] 1.5E-70 - T[485-498] 1.5E-70 - T[683-700] 1.5E-70 - T[700-718] 1.5E-70 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[94-260] 5.4E-56 - T[255-396] 5.11E-11 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[94-257] 3.0E-73 - T[258-316] 1.7E-13 |
| Pfam |
Integrin_bsu_VWA (IPR002369) - T[94-260] 5.1E-77 |
| PANTHER |
Integrin_bsu (IPR015812) - T[440-732] 2.3E-191 |
| ProSitePatterns |
Integrin_bsu (IPR015812) - T[526-539] . - T[568-581] . |
| SUPERFAMILY |
Integrin_bsu_tail_dom_sf (IPR036349) - T[602-680] 8.89E-8 |
| SMART |
Integrin_bsu_tail (IPR012896) - T[603-684] 2.6E-13 |
| Pfam |
Integrin_bsu_cyt_dom (IPR014836) - T[708-732] 8.9E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ITB6_HUMAN | 32.828 % | 389 | 1.78E-124 |
| ITB3_HUMAN | 32.872 % | 388 | 7.22E-124 |
| ITB5_HUMAN | 33.417 % | 392 | 3.57E-125 |