- Transcript 'Moocul.CG.ELv1_2.S83...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S83332.g06269.01.t
Possible name(s)
HMGB1; HMGB2; HMGB3
Gene model
Location
S83332 [23,491 / 24,265]
Amino acid sequence
Length: 201
>Moocul.CG.ELv1_2.S83332.g06269.01.p
MVKKDPNKPRGRMTAYTYFVQTCRDEHKKKHPDESVVFAEFSRKCATRWKGMTPKEKEVF
QKMASKDQVRYEREMRDYVPPKDAKQTKKRRRKDPNAPKRPQSAFFLFCADRRAKIKEEN
QSYSVGDIAKELGKMWAAATPEIKKKYEEQGAIAKAAYLKIMEKYKAEQQNEAAAANAKK
QKKAAAPSSSSSSSSSSDDSD
Nucleotide sequence
Length: 603
>Moocul.CG.ELv1_2.S83332.g06269.01.t
ATGGTCAAGAAAGATCCAAACAAGCCCAGAGGCAGAATGACTGCTTACACTTACTTCGTG
CAAACCTGCCGAGATGAACACAAGAAAAAGCACCCCGATGAATCTGTTGTTTTTGCCGAA
TTCTCAAGGAAGTGTGCCACAAGATGGAAGGGTATGACACCAAAGGAAAAGGAAGTTTTC
CAAAAGATGGCAAGCAAGGATCAAGTCCGGTACGAACGTGAAATGCGGGATTATGTTCCA
CCAAAAGACGCAAAACAAACAAAAAAACGACGAAGAAAGGACCCAAATGCCCCAAAGCGA
CCTCAATCTGCTTTTTTCCTGTTTTGTGCGGACAGACGGGCAAAGATCAAGGAAGAAAAT
CAATCTTACTCTGTTGGTGACATCGCTAAGGAGCTTGGAAAGATGTGGGCTGCTGCTACC
CCAGAAATAAAGAAGAAGTATGAAGAACAAGGAGCAATTGCAAAGGCCGCATACTTAAAG
ATAATGGAAAAATACAAAGCCGAACAACAGAATGAAGCCGCAGCTGCCAATGCTAAGAAA
CAGAAGAAAGCAGCGGCACCAAGCTCATCATCCTCCAGTAGTTCGAGCTCTGATGACAGC
GAC
| Gene3D |
HMG_box_dom_sf (IPR036910) - T[1-80] 3.1E-31 - T[84-169] 2.4E-25 |
| SUPERFAMILY |
HMG_box_dom_sf (IPR036910) - T[3-81] 4.06E-24 - T[84-167] 6.28E-25 |
| Pfam |
HMG_box_dom (IPR009071) - T[6-78] 8.6E-20 - T[98-166] 1.5E-19 |
| SMART |
HMG_box_dom (IPR009071) - T[8-80] 8.9E-23 - T[97-167] 1.2E-19 |
| ProSiteProfiles |
HMG_box_dom (IPR009071) - T[9-79] 16.003 - T[98-166] 17.111 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMGB1_HUMAN | 55.747 % | 188 | 1.03E-60 |
| HMGB2_HUMAN | 55.172 % | 184 | 1.94E-59 |
| HGB1A_HUMAN | 53.448 % | 177 | 1.78E-56 |