- Transcript 'Harore.CG.MTP2014.S3...' >
- Clone 'AHC0AAA204YC12' >
- Transcript 'Phfumi.CG.MTP2014.S8...' >
- Transcript 'Harore.CG.MTP2014.S3...' >
- Transcript 'Moocul.CG.ELv1_2.S85...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S85078.g06449.01.t
Possible name(s)
ASCC3; HFM1; SNRNP200
Gene model
Location
S85078 [27,665 / 35,871]
Amino acid sequence
Length: 2,143
>Moocul.CG.ELv1_2.S85078.g06449.01.p
MADASARQLQYEYKANSNLVLQADRTLIDRRPRDEPTGEVLTLQGKLLGTKMGDKAQRSR
PPQMEERRAKRHRRDDDIRTGFKVKGTTLLSEGIDEMVGIVYKPRTKETRETYEILLSFI
QAALSDQPRDILCGAADEVILVLKNEKLRDKERRKEIQALLGTLEDTRYHVLVNLGRKIT
DFGSEKDKETADDNIDETYGVNVQFESDEDMGDEDAFGEVGASDDEEDDDEGGVEASTNV
VVSASLTNEAGNVNVTKDRELHPRDIDAYWLQRNLSKVYDDAIVSQKKAEEVLEILKTAT
DHLQCENQLVMLLGFNQFDFIKVLREHRKMILYCTMLASAQSKSEKNKIEEKMKEDGELK
IILQQLYETEKEDIIKEEQERRERLRKSKVDADLDAMETDETDKSLQPTAVIDLEDIMFT
QGSHLMANKKCQLPDGSYRKQRKGYEEVHVPALKPKPFKDDEKLINIDKLPKYAQAAFDG
YKSLNRVQSRLSKATLDSDENILLCAPTGAGKTNVALLTMLREIGKHINSDGTINVNDFK
IIYIAPMKSLVQEMVGTFGKRLATYGITVSELTGDHQLCKEEINATQVIVCTPEKWDIIT
RKGGERTYTQLVRLLIIDEIHMLHDDRGPVLEAVVARTIRSVETTQEDVRLVGLSATLPN
YEDVATFLRVNPAKGLFFFDNSFRPCPLEQQYVGITEKKAIKRFQVMNEIVYDKVVENAG
KNQVLVFVHSRKETGKTARAIRDMCLENDTIGHFLREGSASTEVLRTESEEVKNLELKDL
LPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPE
KGRWVELGALDVLQMMGRAGRPQYDTKGEGVLITSHSELQYYLSLLNQQLPVESQMVSKL
PDMLNAEIVLGNIQSVKDAVTWLGYTYLYIRMLRQPTLYGISHDQLKSDSLLQQHRVDIV
HSALSTLAKNNLVKYDRKSGNIQGTDLGRIASHYYCTNESMATYNQLLKPTLSEIELFRV
FSLSSEFKYITVREEEKMELQKLLERVPIPIKESIEEATAKVNVLLQAHISQLKLEGFAL
MSDMVYVTQSAGRLVRAIFEIVLYRGWAQLAEKCLTLCKMVQSRMWQSMVPLRQFKKVPE
EVVKKIEKKNFPWERFYDLGHNEIGELIRMPKMGKTLHKLIHQFPKMELSVHIQPITRNT
LRVELTITPDFQWDEKIHGLSQPFWIFVEDVDSEIILHHEYFLLKSKYATDEHVVNFFVP
VFEPLPPQYFIRIVSDKWIASETQLPVSFRHLILPEKYQPPTELLDLQPLPVNALRNNVY
ESLYQKKFPCFNPIQTQCFNALYNTNENILIGAPTGSGKTVCAEIAIMHALSQTEEARCV
YVTPMESLAKITYEDWKDRFEDILGKRVVLLSGETSTDLKLIAKGNIIISTPEKWDVLSR
RWKQRKNVQNVNLFIMDEIHLLGGEAGPEIEVVCSRMRYVSSQLDRQIRIIALGSSIANS
KDVAQWLGCNAAHTFNFHPNVRPIPLELHIQGFNISHAQSRLLSMTKPVYNAVVKHSPKQ
SAIIFVTSRKQSKLTAIDMLTYAAADGQAQKFLHCEEEDLAPYLEHIKDETLKESITNGV
AYMHDGTSDMERNVIDQLFNSGAIQVLVVSRTLCWSLTASAYLVVVMDTQYYNGKIHAYV
DYSVTDVLQMMGRANKPLTYDEGKCVIMCQGSKKDFFKKFLYEPLPVESHLDHSLHDHFN
AEIVTKTIENKQDAVDYLTWTFLYRRMTQNPNYYNLQGVTHRHLSDSLSELVENTLADLE
QSKCITIEDDMDISPLNLAMIAAYYYINYTTIELFSMSLNAKTKIRGLIEIISNAAEYES
LPLRHREDSTLKQLLTKVPYKPQNPRFTDPHVKTNLLLQAHLSRLTLPAELQSDTEEILS
KAIRLIQACVDVLSSNGWLSPALAAMELAQMVTQGMWSKDSYLKQLPHFNSDIIGRCTEK
EIESVFDILEMEDDDRDGLLKFSAAQMADVARFCNRYPNIELNYDINDQDNLKAGSPVVV
MVTLEREDEVSGPVIAPFFPQKREEGWWVVVGDPKTNSLISIKRLTLQQKAKVKLDFVPP
TAGHHSYTLYFMSDAYMGCDQEYKVSIDVRESDGEESSMSESD
Nucleotide sequence
Length: 6,842
>Moocul.CG.ELv1_2.S85078.g06449.01.t
TTCTTTCTAGATTACTCATATTTGTAATAACTAATATTAAACCAATATGGCGGACGCATC
TGCCCGTCAGCTCCAGTATGAGTACAAAGCGAATTCCAACTTGGTTTTGCAAGCTGATCG
TACCTTGATTGATCGTCGGCCACGAGATGAACCTACTGGTGAAGTTTTGACTCTTCAAGG
TAAGCTTTTGGGTACAAAAATGGGAGACAAAGCTCAAAGGTCTCGGCCGCCACAGATGGA
GGAAAGAAGAGCAAAGCGACATCGAAGAGATGATGACATCAGGACTGGTTTTAAGGTAAA
AGGTACAACTTTACTTTCCGAAGGAATTGATGAAATGGTCGGAATTGTGTACAAACCAAG
AACGAAGGAAACACGTGAAACATACGAAATTTTGTTAAGTTTTATCCAAGCTGCTCTTAG
TGATCAACCTCGTGATATTTTATGTGGTGCTGCTGATGAAGTGATCTTAGTTCTTAAAAA
TGAAAAATTGAGGGATAAAGAACGAAGAAAAGAGATCCAGGCCTTGCTTGGTACACTGGA
AGACACAAGATATCATGTGTTGGTCAACCTGGGAAGAAAAATCACAGATTTTGGAAGTGA
GAAAGATAAGGAAACTGCAGATGATAATATTGATGAAACTTACGGCGTAAATGTCCAGTT
TGAGTCTGATGAAGATATGGGTGATGAAGATGCTTTCGGGGAAGTTGGAGCTTCTGATGA
TGAAGAAGATGATGACGAAGGAGGTGTAGAAGCATCTACGAATGTTGTAGTGTCTGCAAG
TCTTACTAACGAAGCTGGAAATGTAAACGTTACCAAAGATCGCGAGCTTCATCCAAGAGA
TATTGATGCTTATTGGCTTCAAAGAAACTTGAGTAAAGTTTACGATGATGCCATTGTTTC
ACAGAAGAAAGCTGAAGAAGTATTGGAAATTTTGAAGACAGCAACCGATCATCTTCAGTG
TGAAAATCAACTTGTAATGCTGCTTGGATTCAATCAATTTGACTTCATCAAGGTCTTGCG
TGAACACAGGAAAATGATCTTGTATTGCACAATGCTGGCAAGTGCTCAAAGTAAGTCTGA
GAAAAACAAGATTGAAGAAAAGATGAAGGAGGATGGTGAATTAAAGATCATTCTCCAGCA
GCTGTATGAAACCGAAAAAGAAGACATCATCAAGGAAGAGCAAGAACGAAGAGAGAGATT
GAGGAAGAGCAAAGTGGATGCGGATTTGGATGCAATGGAAACAGATGAAACTGACAAATC
ACTTCAGCCTACCGCAGTCATTGATCTTGAAGATATTATGTTCACTCAGGGTTCCCATTT
GATGGCAAATAAGAAATGTCAATTGCCTGATGGTTCTTATCGTAAGCAAAGAAAAGGATA
TGAGGAAGTTCATGTTCCAGCTTTGAAACCAAAACCTTTTAAAGATGACGAGAAGTTGAT
CAATATCGACAAACTTCCAAAATATGCTCAAGCAGCTTTTGATGGTTACAAATCATTGAA
CAGGGTTCAAAGTCGTCTATCAAAAGCCACACTAGATAGCGATGAAAATATACTGTTGTG
TGCACCCACTGGAGCAGGTAAAACAAATGTCGCTTTGCTTACTATGTTGAGAGAAATTGG
TAAGCATATTAACAGTGATGGAACCATCAACGTGAATGATTTTAAAATAATTTATATTGC
GCCAATGAAATCTTTAGTACAAGAAATGGTTGGTACATTCGGTAAACGGCTTGCAACCTA
TGGAATCACAGTCAGTGAATTGACTGGGGATCACCAACTTTGCAAAGAAGAAATCAATGC
TACTCAGGTCATTGTATGCACTCCTGAAAAGTGGGATATCATAACAAGAAAAGGTGGAGA
ACGAACATACACACAACTTGTCAGGTTGTTGATCATTGATGAAATTCACATGTTACATGA
CGATCGAGGACCTGTTCTTGAAGCAGTCGTTGCGAGAACAATTCGGTCTGTGGAGACCAC
ACAAGAAGATGTCCGATTGGTTGGATTATCAGCTACATTGCCAAATTACGAAGATGTTGC
GACGTTCTTGAGAGTAAATCCTGCAAAGGGGCTGTTTTTCTTTGATAACAGCTTTAGACC
TTGTCCTTTGGAACAGCAGTATGTTGGAATCACAGAGAAGAAGGCAATTAAGCGGTTTCA
AGTCATGAATGAAATTGTTTATGATAAAGTTGTTGAGAACGCAGGGAAGAACCAAGTTCT
TGTCTTTGTTCATTCGCGAAAAGAGACTGGGAAGACTGCAAGAGCAATTCGAGACATGTG
CTTGGAAAATGACACAATTGGACATTTTCTGCGAGAAGGATCTGCATCCACAGAAGTCCT
CCGTACAGAATCCGAAGAAGTAAAAAACTTGGAATTAAAGGACCTGCTTCCTTATGGATT
TGCTATACATCATGCTGGAATGACGAGAGTTGACAGAACTCTCGTTGAAGATTTGTTTGC
TGATCGACATATACAAGTTTTAGTATCAACAGCCACTCTTGCTTGGGGTGTGAATCTGCC
TGCACATACTGTAATCATTAAAGGAACACAGGTATATAGTCCAGAGAAAGGAAGATGGGT
TGAACTTGGAGCATTAGATGTTCTACAAATGATGGGAAGAGCTGGTAGGCCACAGTACGA
CACAAAAGGTGAAGGTGTGTTAATTACATCTCACAGTGAGCTGCAGTATTATCTTTCACT
GCTAAATCAACAACTGCCTGTTGAAAGCCAAATGGTTTCGAAATTACCAGATATGCTCAA
TGCAGAAATCGTGTTGGGGAATATTCAAAGTGTAAAAGATGCTGTAACTTGGCTTGGATA
CACATATTTGTATATTCGAATGTTGAGACAACCTACACTTTATGGAATCAGTCATGATCA
ACTGAAATCAGATTCATTGTTGCAACAGCACAGAGTGGATATTGTACATTCCGCATTGAG
CACTTTGGCAAAGAACAACTTGGTAAAATATGACCGAAAATCTGGTAACATACAAGGAAC
CGACTTGGGAAGAATTGCTAGTCACTATTACTGCACTAATGAAAGTATGGCAACTTACAA
CCAATTGCTGAAACCAACTTTGAGTGAAATTGAACTTTTCCGAGTCTTCTCACTTTCATC
AGAGTTCAAGTACATCACTGTTCGAGAAGAGGAGAAGATGGAGTTACAAAAATTACTTGA
AAGAGTACCAATCCCAATTAAAGAAAGTATTGAGGAAGCAACAGCCAAAGTAAATGTATT
GCTTCAAGCTCACATTTCACAGCTGAAACTTGAAGGATTTGCTTTGATGTCTGACATGGT
CTATGTCACTCAATCTGCTGGTAGACTTGTTCGAGCAATATTTGAAATTGTGTTGTACAG
AGGCTGGGCTCAGCTTGCTGAAAAATGCTTGACTTTGTGTAAAATGGTTCAAAGTCGAAT
GTGGCAGTCAATGGTTCCGCTTCGACAGTTCAAAAAAGTTCCTGAAGAAGTTGTAAAGAA
AATTGAGAAGAAGAATTTCCCATGGGAACGATTTTATGATCTTGGGCACAATGAAATTGG
AGAACTCATCAGAATGCCAAAGATGGGTAAAACGCTTCACAAGTTAATTCACCAGTTTCC
AAAAATGGAACTGTCTGTCCACATTCAACCAATCACAAGAAACACATTACGAGTCGAGCT
GACAATCACACCAGATTTCCAATGGGATGAAAAAATTCATGGTCTCTCACAACCGTTCTG
GATTTTTGTAGAAGATGTGGACAGTGAAATCATTCTTCATCATGAATACTTCTTACTGAA
GAGTAAGTATGCAACAGATGAGCATGTTGTAAACTTCTTTGTTCCAGTTTTCGAACCGCT
GCCTCCGCAATATTTCATTCGAATCGTTTCTGATAAATGGATTGCCTCAGAAACCCAACT
GCCAGTTTCATTCCGTCATTTGATATTGCCAGAAAAATATCAACCACCCACAGAACTTCT
TGACTTGCAGCCATTGCCTGTTAATGCACTGAGAAACAATGTCTACGAGAGCTTGTATCA
GAAAAAGTTTCCATGCTTCAACCCTATTCAAACGCAATGCTTTAATGCATTGTACAACAC
CAATGAAAACATATTGATTGGAGCACCAACTGGAAGCGGGAAGACGGTATGCGCTGAAAT
TGCAATAATGCATGCTTTGTCGCAAACCGAAGAAGCAAGATGTGTTTATGTCACACCAAT
GGAATCCCTTGCAAAGATAACATATGAAGACTGGAAGGATAGGTTCGAAGACATCCTGGG
CAAACGAGTTGTTCTGTTAAGTGGTGAAACTAGCACTGATTTGAAACTGATAGCTAAAGG
AAACATAATTATCTCAACACCTGAAAAATGGGATGTGTTGTCTCGACGATGGAAACAACG
AAAAAATGTGCAGAATGTCAATCTTTTCATTATGGATGAGATTCACTTGCTTGGAGGAGA
AGCAGGTCCAGAAATTGAAGTTGTGTGCTCGAGAATGAGATACGTTTCGTCACAGTTGGA
TCGTCAAATAAGAATTATTGCACTTGGCTCATCAATTGCCAATTCAAAAGATGTGGCTCA
GTGGCTGGGATGCAATGCAGCACACACATTCAACTTTCATCCAAATGTACGTCCAATTCC
ATTAGAACTTCACATTCAAGGGTTTAACATCAGCCATGCTCAATCAAGACTGTTGAGTAT
GACAAAACCAGTATACAATGCTGTTGTAAAACATTCACCCAAACAATCCGCCATTATCTT
TGTCACATCTCGAAAACAGAGCAAGCTTACCGCAATCGACATGTTGACATATGCGGCTGC
GGACGGACAAGCGCAAAAGTTTCTTCACTGTGAAGAAGAAGATCTGGCACCTTATTTGGA
ACACATTAAAGATGAAACACTAAAGGAATCTATAACCAATGGTGTTGCATATATGCATGA
TGGCACTTCTGACATGGAACGAAATGTCATCGACCAACTCTTCAACTCTGGTGCAATCCA
AGTTTTAGTCGTTTCGAGAACCTTATGTTGGTCGTTAACAGCTTCAGCTTATCTTGTAGT
AGTCATGGACACTCAATATTACAACGGCAAAATTCATGCTTACGTTGATTATTCTGTAAC
AGATGTTTTGCAAATGATGGGAAGAGCCAATAAACCTTTAACATATGATGAAGGAAAATG
TGTGATTATGTGCCAAGGGTCAAAGAAAGATTTTTTCAAAAAATTCTTATACGAGCCGCT
TCCGGTTGAATCCCACTTGGATCATTCCCTCCATGATCATTTCAATGCTGAAATTGTGAC
CAAAACCATCGAAAACAAACAAGATGCTGTTGATTATTTGACATGGACGTTCCTTTACCG
AAGAATGACTCAAAATCCAAATTACTACAATCTTCAGGGAGTAACGCACAGGCATTTGTC
TGACAGCTTGTCCGAGCTTGTTGAGAACACTTTGGCAGATCTGGAACAATCCAAATGCAT
AACAATTGAAGATGACATGGACATTTCACCTTTGAACTTGGCTATGATTGCAGCTTATTA
CTACATCAACTACACAACCATTGAGTTATTCAGCATGTCTCTGAATGCCAAAACAAAGAT
CCGTGGTCTTATCGAGATCATCAGCAACGCTGCTGAGTATGAATCATTGCCATTGAGACA
CAGAGAAGATTCCACGCTCAAGCAATTGTTGACCAAAGTCCCATACAAGCCACAGAACCC
ACGGTTTACTGACCCTCATGTCAAGACCAATCTTCTACTACAGGCTCACTTGTCCCGTTT
AACTTTGCCAGCCGAATTGCAATCAGACACTGAAGAGATTTTATCGAAAGCAATTCGATT
AATTCAAGCTTGTGTTGATGTCCTGTCATCAAATGGGTGGCTATCACCTGCATTGGCTGC
CATGGAACTTGCACAGATGGTTACACAAGGAATGTGGAGCAAAGATTCATACCTCAAGCA
ACTTCCACACTTCAATTCCGATATCATTGGCAGATGCACTGAAAAGGAAATTGAGAGTGT
ATTTGATATCCTTGAAATGGAAGATGATGACAGAGACGGTCTTCTTAAGTTCTCTGCTGC
ACAGATGGCGGATGTTGCAAGATTCTGTAATCGATATCCTAATATCGAACTTAATTATGA
CATCAATGACCAAGATAATCTAAAAGCAGGATCTCCTGTTGTTGTTATGGTAACCCTGGA
GCGTGAAGATGAGGTTTCCGGTCCAGTGATCGCTCCATTCTTCCCACAGAAACGAGAAGA
AGGATGGTGGGTTGTCGTCGGTGATCCGAAGACCAACAGTCTCATATCAATCAAGAGGCT
GACACTACAGCAAAAAGCAAAGGTAAAACTTGATTTCGTGCCACCAACAGCAGGCCATCA
CAGCTACACATTGTACTTCATGAGTGATGCATACATGGGATGTGACCAGGAGTACAAGGT
GTCAATCGATGTGAGAGAATCTGATGGGGAGGAGAGTAGTATGAGTGAATCGGATTAAAT
TGATTTCTATGTGATACATTTGCTCCGTCGATCAATGTGCTTTTGTGGATACTCCTTCTA
TGAGCAAGAATGTTCTTTTCATGTGCTCAAAAATTCAAACTTGTACAATATTTTGTGTAC
TGAATTAAATTGCCTTTTTTGTCGCAGAAACATTTCCCATGTTTAAAATTTGGTGTAAAC
TTTTACTATTTTCAATGGAATAACAGAACAGAATATGCATCATCTTGGTGTAGTTCCAAT
TCCAATCATCGTTTGGTTTCTACATTATAATAATTACTGCTTTTTTAAGTTTTGTATGTG
ATATTGTGTAAAATAAATATTCCAATATCTCACAAAAATGACATAAACTGCAAACAATAC
CA
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[424-669] 6.69E-43 - T[679-891] 3.04E-47 - T[1213-1508] 8.85E-51 - T[1517-1726] 2.58E-34 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[480-691] 4.5E-31 - T[1327-1529] 4.6E-27 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[486-661] 1.3E-24 - T[1333-1493] 1.1E-24 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[493-676] 21.053 - T[1340-1515] 21.606 |
| SMART |
AAA+_ATPase (IPR003593) - T[498-815] 0.033 - T[1345-1503] 0.59 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[687-924] 12.097 - T[1548-1756] 8.423 |
| CDD |
Helicase_C (IPR001650) - T[687-861] 2.65612E-13 |
| SMART |
Helicase_C (IPR001650) - T[771-863] 2.1E-17 - T[1610-1695] 0.0014 |
| Pfam |
Helicase_C (IPR001650) - T[772-861] 1.8E-6 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[891-995] 1.93E-7 - T[1726-1827] 1.58E-7 |
| SMART |
Sec63-dom (IPR004179) - T[984-1289] 3.2E-125 - T[1815-2127] 1.2E-116 |
| Pfam |
Sec63-dom (IPR004179) - T[985-1288] 1.3E-92 - T[1815-2126] 2.7E-80 |
| Gene3D |
C2_domain_sf (IPR035892) - T[1184-1292] 2.7E-48 - T[2018-2139] 5.3E-48 |
| SUPERFAMILY |
Ig_E-set (IPR014756) - T[2019-2131] 8.12E-33 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ASCC3_HUMAN | 42.825 % | 1521 | 0 |
| U520_HUMAN | 77.83 % | 3522 | 0 |
| HFM1_HUMAN | 32.199 % | 312 | 2.29E-86 |