- EST 'BW365257' >
- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'Moocul.CG.ELv1_2.S53...' >
- Transcript 'Moocul.CG.ELv1_2.S85...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S85296.g06496.01.t
Possible name(s)
DDX58; DHX58; IFIH1
Gene model
Location
S85296 [47 / 12,907]
Amino acid sequence
Length: 1,155
>Moocul.CG.ELv1_2.S85296.g06496.01.p
MEFLDKCELVGDKKLVKYLPEAKLGSGNQSKVYKGLYNDSTIIYAIKLMKSSERDESEGK
FHEDQELHHPNVVKFMFHFKDRNECEKLNIDSLGVLHGAAKGLHYLHTKNIHLSLAEDKP
WDVYSFGLVIYFVLTNGRHAFMLGNVQEPNLFEIIANVNKKSPPNLSAFELKDESWRNTN
EKFINLLTMMLSHDKDERPSMSQVLGHHIFWHSQKCIHFIMNVSDHLKGIRNQKDSTTLS
DSEKNCMKEFEKLSKVICNNDWATPLKEAISKSTKPNEKRYKRKNDVFELLKIIRDWNHH
YGDAGVKEEFVNELGSLPHGFWKYFSTRFPTLITHVYQTLKPYYEENSNLQNWKRFEEFF
EYREVHEFGQHHSNSQALLQSAPMKSEGPSSSKHLTLLDVKDEANVPSTPKQAQARKSTL
ILRPYQEELIEEAIKGKNCMIVAPTGSGKTPVALKIIENHIKMKSSKKILFIVPKVELAI
QQYDFFVRNLGGVKIECVTSRVGDNAAGLVMKKNKVTILTPQFLVDVLKRRKSYVKLDDF
SLLILDECHHTTKDHPYQKIMSAVVKREHDEPNGSKTQIVGLTASPGIGKGKTREKVLDN
LIELLSRLNIDNYPVRVARETESLKKHMNTIGECKDYRRIKPSQDDFYKKIVRAMEIIEN
ELEVFRVIGKDKHKFPPGSKEVQAYENWCVDLKKYLQRQKHAQMDTATMIQCAEHLQTNM
KWETYFKLIHSIYHKLLDLRNHIPNAWQIVVDELTTCDKDNSIIEKLTMIKDELHTHYRQ
NRMSVPLVDELVEILVEHFSNPNDDSRCIIFVRRKDVVDSLVKYLNGTEATKDLKTTKLT
TAHQKSDQGGMTSAEQQQTMKAFKTGRSKLLVATSVAEEGLDIPACNLVIAYNYVTNEIG
RMQRKGRGRAEHSRVILLALESSGHVTREENNKISSEATEFALEDIRTDYTPSELKKEIK
QLQIADRRKRERKEKEDKALKSPAKDWKLRCGKCKQLLAPAGHLRHINSQHKILHDIGDE
FSNTTIAKPSTREQEMFGGISNVGSVLCAECKEHLGCLMKYEGKRHKSLKCLKVLFDHPK
AKEYVSSKQWSKAPFEVEKAIEHDDESDDESVYEFVSDNESDVESGDNIGIIDMKYEDCD
DYELYDSMSILNDNQ
Nucleotide sequence
Length: 3,942
>Moocul.CG.ELv1_2.S85296.g06496.01.t
CTGATACAAAATAACAGAAAAAAAGCAATATCGGAATAAGAACTAATCACATGATCTTGT
GATAGTAGAAGGTAGTACCTTACAGCTTTACAGTACAGACAAAACAAGTTTTATTTCGGC
CTCTTATCAAAACTTGCGACATTCATCAGCTCATTCTGCATTCTGACATTCAGCATTGAA
CTGTTCAACATTCAGACATTAGCCATATCTGATCATCAGATTATTGCCATGGCAGTCTGG
CAGTAGGTGTCCAAATATAGACTCAAGGTTGTCTGGCGACTGGCGGACTAGCATGACTAG
TATATACTGCTATATCTTATAGTTCTGTCATGTCTGTAAGCTAAATCAATTAACGCAAAT
GGAATTCTTGGACAAATGTGAGTTGGTTGGTGATAAAAAACTAGTGAAATACCTTCCTGA
AGCAAAACTGGGGAGTGGCAACCAATCTAAAGTTTACAAGGGGTTGTACAACGACAGCAC
GATAATTTATGCCATCAAATTAATGAAAAGTTCGGAGCGTGATGAATCGGAAGGAAAGTT
TCATGAAGATCAGGAACTCCATCATCCAAATGTCGTCAAATTTATGTTTCATTTCAAAGA
TCGGAATGAATGTGAAAAGCTTAACATCGATTCACTTGGAGTTCTTCATGGAGCTGCAAA
GGGTCTTCATTATCTTCATACCAAAAACATACACCTTAGCCTTGCTGAAGATAAACCTTG
GGATGTTTATTCATTTGGACTCGTCATTTACTTCGTACTTACAAATGGAAGACATGCTTT
TATGCTTGGGAATGTGCAAGAACCAAATCTGTTTGAAATAATTGCAAACGTGAATAAAAA
ATCACCACCAAATCTTTCGGCATTCGAGTTAAAAGATGAATCATGGAGGAACACAAACGA
GAAATTTATTAATTTACTGACAATGATGTTGTCGCATGACAAAGACGAACGTCCTTCAAT
GTCTCAAGTGTTGGGACATCATATATTCTGGCATTCGCAGAAGTGCATTCATTTTATTAT
GAACGTAAGCGACCACTTAAAAGGAATCCGCAACCAGAAAGATTCTACTACTTTGAGCGA
CAGTGAAAAGAATTGCATGAAAGAATTTGAAAAACTTTCAAAAGTTATCTGCAACAACGA
CTGGGCAACTCCATTGAAGGAAGCAATTTCCAAATCAACTAAACCCAATGAAAAAAGATA
TAAAAGAAAAAACGATGTGTTTGAACTGTTAAAGATCATTCGTGATTGGAATCATCACTA
TGGCGACGCTGGTGTCAAAGAGGAGTTTGTAAATGAACTTGGGTCTTTACCACATGGATT
CTGGAAATATTTTTCAACTCGTTTTCCAACTTTAATAACTCATGTCTACCAAACATTAAA
ACCATATTATGAGGAAAACTCAAATCTACAAAACTGGAAAAGATTTGAAGAATTCTTTGA
GTACCGTGAAGTTCATGAGTTTGGGCAACATCATTCAAACAGTCAAGCACTTTTGCAGTC
GGCTCCAATGAAGAGTGAAGGTCCTTCATCATCTAAACATTTAACTCTTCTTGATGTCAA
GGATGAGGCAAATGTGCCATCAACACCAAAACAAGCACAAGCAAGAAAATCAACACTGAT
ATTGAGGCCGTACCAGGAAGAACTTATAGAAGAAGCAATCAAAGGGAAGAACTGTATGAT
AGTTGCACCTACTGGTTCTGGTAAAACACCTGTCGCACTCAAGATAATCGAAAATCACAT
AAAAATGAAAAGTTCAAAGAAAATATTGTTTATTGTTCCAAAGGTTGAATTGGCAATACA
GCAGTATGATTTCTTTGTCAGGAATCTCGGTGGTGTAAAAATCGAGTGTGTCACGAGTCG
AGTTGGTGATAATGCAGCTGGTCTCGTTATGAAGAAAAATAAAGTAACGATACTCACACC
ACAGTTTCTTGTTGATGTGCTGAAGCGGCGAAAAAGTTACGTGAAACTTGATGATTTTTC
CTTGTTGATTCTGGATGAATGTCATCATACAACGAAAGACCATCCTTATCAGAAAATTAT
GAGTGCCGTTGTCAAAAGAGAGCATGATGAACCTAACGGGTCGAAAACACAGATTGTTGG
TCTGACCGCATCTCCGGGAATCGGAAAGGGCAAAACGCGTGAAAAAGTTCTGGACAATTT
GATTGAGTTGCTCTCGCGTTTGAACATCGACAATTATCCCGTTCGAGTCGCTCGAGAAAC
TGAGAGTTTGAAAAAGCATATGAATACAATTGGCGAATGTAAGGATTACCGCCGGATAAA
ACCATCTCAGGATGATTTCTATAAAAAAATTGTAAGAGCGATGGAAATCATTGAAAATGA
ACTTGAAGTATTTCGAGTTATTGGCAAAGATAAACATAAATTTCCTCCGGGTTCTAAGGA
AGTGCAGGCATACGAAAATTGGTGTGTTGATTTGAAGAAATATTTGCAACGTCAAAAGCA
TGCACAAATGGACACTGCAACTATGATACAATGTGCTGAACATTTACAGACAAATATGAA
GTGGGAAACTTACTTCAAACTCATTCATTCCATTTACCATAAACTGCTGGATCTTCGTAA
TCACATTCCAAATGCATGGCAGATTGTTGTTGATGAACTTACAACTTGCGACAAAGATAA
CTCAATCATCGAAAAGCTGACGATGATCAAAGATGAACTTCACACTCATTACCGACAAAA
TCGAATGTCAGTTCCGCTTGTTGATGAATTGGTTGAAATTCTTGTGGAACATTTCAGCAA
CCCGAACGATGATTCGCGGTGCATTATATTCGTGCGTAGAAAAGACGTCGTTGACAGTTT
AGTGAAATACTTGAACGGCACCGAAGCTACGAAAGATTTGAAAACAACTAAACTGACAAC
AGCTCACCAGAAGAGTGACCAAGGAGGAATGACGTCAGCTGAACAACAACAAACAATGAA
AGCTTTTAAAACTGGACGTAGCAAGTTGCTAGTGGCAACATCTGTTGCCGAAGAAGGTCT
TGACATTCCAGCTTGCAATCTTGTTATTGCATACAACTATGTCACGAATGAAATTGGACG
AATGCAAAGAAAAGGACGTGGAAGAGCTGAACACAGCCGGGTGATTCTTCTTGCCTTAGA
AAGCAGTGGACATGTTACTCGAGAGGAGAACAACAAAATATCATCAGAAGCAACTGAATT
TGCACTCGAAGATATCAGGACAGATTACACTCCGAGTGAATTAAAAAAAGAGATTAAACA
ACTACAGATTGCAGATCGTCGAAAACGTGAACGAAAAGAAAAAGAAGACAAAGCATTAAA
AAGTCCTGCCAAGGATTGGAAACTTCGATGTGGCAAATGTAAGCAGTTATTGGCACCTGC
AGGTCACTTACGACACATCAACAGCCAGCACAAGATTTTGCATGATATCGGTGATGAGTT
TTCCAATACAACGATCGCTAAGCCAAGTACTCGTGAACAAGAAATGTTTGGTGGGATTTC
TAATGTGGGATCTGTTTTATGTGCAGAATGCAAGGAACATCTTGGATGTTTGATGAAATA
TGAAGGGAAGAGGCATAAAAGTTTAAAATGTCTGAAAGTGCTTTTTGACCATCCAAAAGC
TAAAGAATATGTAAGTTCAAAGCAATGGAGCAAAGCACCTTTTGAGGTAGAAAAAGCAAT
CGAACATGATGACGAATCTGATGATGAATCTGTATATGAGTTTGTATCTGATAATGAATC
TGATGTCGAATCTGGTGATAATATCGGTATTATTGATATGAAGTATGAAGACTGTGATGA
TTATGAATTGTATGATTCGATGTCAATTTTAAATGATAATCAGTAATTAGCTTCAACTGA
AATGCTCTGCAGTAATAACATCTATTATAATCAACTTTAATGGCTAGTGGACCTAATGTG
GCTTCAGTGGCTAGGATGTTCTTCAACATCTTGTAATATTCT
| ProSiteProfiles |
Prot_kinase_dom (IPR000719) - T[1-210] 11.015 |
| SUPERFAMILY |
Kinase-like_dom_sf (IPR011009) - T[18-221] 4.25E-23 |
| Pfam |
Prot_kinase_dom (IPR000719) - T[118-210] 2.1E-6 |
| ProSiteProfiles |
KEN_dom (IPR010513) - T[213-362] 22.333 |
| Gene3D |
KEN_sf (IPR038357) - T[217-370] 1.0E-21 |
| Pfam |
KEN_dom (IPR010513) - T[218-351] 1.5E-20 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[418-618] 1.9E-31 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[424-586] 3.9E-22 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[430-604] 22.675 |
| SMART |
AAA+_ATPase (IPR003593) - T[435-616] 0.0076 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[467-621] 2.66E-44 - T[787-921] 2.66E-44 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[787-959] 17.316 |
| CDD |
Helicase_C (IPR001650) - T[789-918] 4.56436E-19 |
| Pfam |
Helicase_C (IPR001650) - T[792-910] 4.5E-19 |
| SMART |
Helicase_C (IPR001650) - T[819-911] 3.8E-14 |
| ProSiteProfiles |
RLR_CTR (IPR021673) - T[976-1107] 21.821 |
| Gene3D |
RLR_C_sf (IPR038557) - T[976-1118] 5.9E-18 |
| Pfam |
RLR_CTR (IPR021673) - T[987-1099] 3.0E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DHX58_HUMAN | 28.775 % | 220 | 1.42E-60 |
| DDX58_HUMAN | 28.939 % | 227 | 2.38E-61 |
| IFIH1_HUMAN | 27.404 % | 210 | 1.24E-55 |