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TRANSCRIPT CARD

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  1. Clone 'cien54268'
  2. Transcript 'Moocul.CG.ELv1_2.S53...'
  3. Transcript 'Moocul.CG.ELv1_2.S85...'

Transcript Model

Transcript Id

Moocul.CG.ELv1_2.S85296.g06496.01.t

Possible name(s)

DDX58; DHX58; IFIH1

Location

S85296 [47 / 12,907]

Sequences

Amino acid sequence

Length: 1,155

>Moocul.CG.ELv1_2.S85296.g06496.01.p
MEFLDKCELVGDKKLVKYLPEAKLGSGNQSKVYKGLYNDSTIIYAIKLMKSSERDESEGK
FHEDQELHHPNVVKFMFHFKDRNECEKLNIDSLGVLHGAAKGLHYLHTKNIHLSLAEDKP
WDVYSFGLVIYFVLTNGRHAFMLGNVQEPNLFEIIANVNKKSPPNLSAFELKDESWRNTN
EKFINLLTMMLSHDKDERPSMSQVLGHHIFWHSQKCIHFIMNVSDHLKGIRNQKDSTTLS
DSEKNCMKEFEKLSKVICNNDWATPLKEAISKSTKPNEKRYKRKNDVFELLKIIRDWNHH
YGDAGVKEEFVNELGSLPHGFWKYFSTRFPTLITHVYQTLKPYYEENSNLQNWKRFEEFF
EYREVHEFGQHHSNSQALLQSAPMKSEGPSSSKHLTLLDVKDEANVPSTPKQAQARKSTL
ILRPYQEELIEEAIKGKNCMIVAPTGSGKTPVALKIIENHIKMKSSKKILFIVPKVELAI
QQYDFFVRNLGGVKIECVTSRVGDNAAGLVMKKNKVTILTPQFLVDVLKRRKSYVKLDDF
SLLILDECHHTTKDHPYQKIMSAVVKREHDEPNGSKTQIVGLTASPGIGKGKTREKVLDN
LIELLSRLNIDNYPVRVARETESLKKHMNTIGECKDYRRIKPSQDDFYKKIVRAMEIIEN
ELEVFRVIGKDKHKFPPGSKEVQAYENWCVDLKKYLQRQKHAQMDTATMIQCAEHLQTNM
KWETYFKLIHSIYHKLLDLRNHIPNAWQIVVDELTTCDKDNSIIEKLTMIKDELHTHYRQ
NRMSVPLVDELVEILVEHFSNPNDDSRCIIFVRRKDVVDSLVKYLNGTEATKDLKTTKLT
TAHQKSDQGGMTSAEQQQTMKAFKTGRSKLLVATSVAEEGLDIPACNLVIAYNYVTNEIG
RMQRKGRGRAEHSRVILLALESSGHVTREENNKISSEATEFALEDIRTDYTPSELKKEIK
QLQIADRRKRERKEKEDKALKSPAKDWKLRCGKCKQLLAPAGHLRHINSQHKILHDIGDE
FSNTTIAKPSTREQEMFGGISNVGSVLCAECKEHLGCLMKYEGKRHKSLKCLKVLFDHPK
AKEYVSSKQWSKAPFEVEKAIEHDDESDDESVYEFVSDNESDVESGDNIGIIDMKYEDCD
DYELYDSMSILNDNQ

Nucleotide sequence

Length: 3,942

>Moocul.CG.ELv1_2.S85296.g06496.01.t
CTGATACAAAATAACAGAAAAAAAGCAATATCGGAATAAGAACTAATCACATGATCTTGT
GATAGTAGAAGGTAGTACCTTACAGCTTTACAGTACAGACAAAACAAGTTTTATTTCGGC
CTCTTATCAAAACTTGCGACATTCATCAGCTCATTCTGCATTCTGACATTCAGCATTGAA
CTGTTCAACATTCAGACATTAGCCATATCTGATCATCAGATTATTGCCATGGCAGTCTGG
CAGTAGGTGTCCAAATATAGACTCAAGGTTGTCTGGCGACTGGCGGACTAGCATGACTAG
TATATACTGCTATATCTTATAGTTCTGTCATGTCTGTAAGCTAAATCAATTAACGCAAAT
GGAATTCTTGGACAAATGTGAGTTGGTTGGTGATAAAAAACTAGTGAAATACCTTCCTGA
AGCAAAACTGGGGAGTGGCAACCAATCTAAAGTTTACAAGGGGTTGTACAACGACAGCAC
GATAATTTATGCCATCAAATTAATGAAAAGTTCGGAGCGTGATGAATCGGAAGGAAAGTT
TCATGAAGATCAGGAACTCCATCATCCAAATGTCGTCAAATTTATGTTTCATTTCAAAGA
TCGGAATGAATGTGAAAAGCTTAACATCGATTCACTTGGAGTTCTTCATGGAGCTGCAAA
GGGTCTTCATTATCTTCATACCAAAAACATACACCTTAGCCTTGCTGAAGATAAACCTTG
GGATGTTTATTCATTTGGACTCGTCATTTACTTCGTACTTACAAATGGAAGACATGCTTT
TATGCTTGGGAATGTGCAAGAACCAAATCTGTTTGAAATAATTGCAAACGTGAATAAAAA
ATCACCACCAAATCTTTCGGCATTCGAGTTAAAAGATGAATCATGGAGGAACACAAACGA
GAAATTTATTAATTTACTGACAATGATGTTGTCGCATGACAAAGACGAACGTCCTTCAAT
GTCTCAAGTGTTGGGACATCATATATTCTGGCATTCGCAGAAGTGCATTCATTTTATTAT
GAACGTAAGCGACCACTTAAAAGGAATCCGCAACCAGAAAGATTCTACTACTTTGAGCGA
CAGTGAAAAGAATTGCATGAAAGAATTTGAAAAACTTTCAAAAGTTATCTGCAACAACGA
CTGGGCAACTCCATTGAAGGAAGCAATTTCCAAATCAACTAAACCCAATGAAAAAAGATA
TAAAAGAAAAAACGATGTGTTTGAACTGTTAAAGATCATTCGTGATTGGAATCATCACTA
TGGCGACGCTGGTGTCAAAGAGGAGTTTGTAAATGAACTTGGGTCTTTACCACATGGATT
CTGGAAATATTTTTCAACTCGTTTTCCAACTTTAATAACTCATGTCTACCAAACATTAAA
ACCATATTATGAGGAAAACTCAAATCTACAAAACTGGAAAAGATTTGAAGAATTCTTTGA
GTACCGTGAAGTTCATGAGTTTGGGCAACATCATTCAAACAGTCAAGCACTTTTGCAGTC
GGCTCCAATGAAGAGTGAAGGTCCTTCATCATCTAAACATTTAACTCTTCTTGATGTCAA
GGATGAGGCAAATGTGCCATCAACACCAAAACAAGCACAAGCAAGAAAATCAACACTGAT
ATTGAGGCCGTACCAGGAAGAACTTATAGAAGAAGCAATCAAAGGGAAGAACTGTATGAT
AGTTGCACCTACTGGTTCTGGTAAAACACCTGTCGCACTCAAGATAATCGAAAATCACAT
AAAAATGAAAAGTTCAAAGAAAATATTGTTTATTGTTCCAAAGGTTGAATTGGCAATACA
GCAGTATGATTTCTTTGTCAGGAATCTCGGTGGTGTAAAAATCGAGTGTGTCACGAGTCG
AGTTGGTGATAATGCAGCTGGTCTCGTTATGAAGAAAAATAAAGTAACGATACTCACACC
ACAGTTTCTTGTTGATGTGCTGAAGCGGCGAAAAAGTTACGTGAAACTTGATGATTTTTC
CTTGTTGATTCTGGATGAATGTCATCATACAACGAAAGACCATCCTTATCAGAAAATTAT
GAGTGCCGTTGTCAAAAGAGAGCATGATGAACCTAACGGGTCGAAAACACAGATTGTTGG
TCTGACCGCATCTCCGGGAATCGGAAAGGGCAAAACGCGTGAAAAAGTTCTGGACAATTT
GATTGAGTTGCTCTCGCGTTTGAACATCGACAATTATCCCGTTCGAGTCGCTCGAGAAAC
TGAGAGTTTGAAAAAGCATATGAATACAATTGGCGAATGTAAGGATTACCGCCGGATAAA
ACCATCTCAGGATGATTTCTATAAAAAAATTGTAAGAGCGATGGAAATCATTGAAAATGA
ACTTGAAGTATTTCGAGTTATTGGCAAAGATAAACATAAATTTCCTCCGGGTTCTAAGGA
AGTGCAGGCATACGAAAATTGGTGTGTTGATTTGAAGAAATATTTGCAACGTCAAAAGCA
TGCACAAATGGACACTGCAACTATGATACAATGTGCTGAACATTTACAGACAAATATGAA
GTGGGAAACTTACTTCAAACTCATTCATTCCATTTACCATAAACTGCTGGATCTTCGTAA
TCACATTCCAAATGCATGGCAGATTGTTGTTGATGAACTTACAACTTGCGACAAAGATAA
CTCAATCATCGAAAAGCTGACGATGATCAAAGATGAACTTCACACTCATTACCGACAAAA
TCGAATGTCAGTTCCGCTTGTTGATGAATTGGTTGAAATTCTTGTGGAACATTTCAGCAA
CCCGAACGATGATTCGCGGTGCATTATATTCGTGCGTAGAAAAGACGTCGTTGACAGTTT
AGTGAAATACTTGAACGGCACCGAAGCTACGAAAGATTTGAAAACAACTAAACTGACAAC
AGCTCACCAGAAGAGTGACCAAGGAGGAATGACGTCAGCTGAACAACAACAAACAATGAA
AGCTTTTAAAACTGGACGTAGCAAGTTGCTAGTGGCAACATCTGTTGCCGAAGAAGGTCT
TGACATTCCAGCTTGCAATCTTGTTATTGCATACAACTATGTCACGAATGAAATTGGACG
AATGCAAAGAAAAGGACGTGGAAGAGCTGAACACAGCCGGGTGATTCTTCTTGCCTTAGA
AAGCAGTGGACATGTTACTCGAGAGGAGAACAACAAAATATCATCAGAAGCAACTGAATT
TGCACTCGAAGATATCAGGACAGATTACACTCCGAGTGAATTAAAAAAAGAGATTAAACA
ACTACAGATTGCAGATCGTCGAAAACGTGAACGAAAAGAAAAAGAAGACAAAGCATTAAA
AAGTCCTGCCAAGGATTGGAAACTTCGATGTGGCAAATGTAAGCAGTTATTGGCACCTGC
AGGTCACTTACGACACATCAACAGCCAGCACAAGATTTTGCATGATATCGGTGATGAGTT
TTCCAATACAACGATCGCTAAGCCAAGTACTCGTGAACAAGAAATGTTTGGTGGGATTTC
TAATGTGGGATCTGTTTTATGTGCAGAATGCAAGGAACATCTTGGATGTTTGATGAAATA
TGAAGGGAAGAGGCATAAAAGTTTAAAATGTCTGAAAGTGCTTTTTGACCATCCAAAAGC
TAAAGAATATGTAAGTTCAAAGCAATGGAGCAAAGCACCTTTTGAGGTAGAAAAAGCAAT
CGAACATGATGACGAATCTGATGATGAATCTGTATATGAGTTTGTATCTGATAATGAATC
TGATGTCGAATCTGGTGATAATATCGGTATTATTGATATGAAGTATGAAGACTGTGATGA
TTATGAATTGTATGATTCGATGTCAATTTTAAATGATAATCAGTAATTAGCTTCAACTGA
AATGCTCTGCAGTAATAACATCTATTATAATCAACTTTAATGGCTAGTGGACCTAATGTG
GCTTCAGTGGCTAGGATGTTCTTCAACATCTTGTAATATTCT

InterProScan

ProSiteProfiles
Prot_kinase_dom (IPR000719) - T[1-210] 11.015
SUPERFAMILY
Kinase-like_dom_sf (IPR011009) - T[18-221] 4.25E-23
Pfam
Prot_kinase_dom (IPR000719) - T[118-210] 2.1E-6
ProSiteProfiles
KEN_dom (IPR010513) - T[213-362] 22.333
Gene3D
KEN_sf (IPR038357) - T[217-370] 1.0E-21
Pfam
KEN_dom (IPR010513) - T[218-351] 1.5E-20
SMART
Helicase_ATP-bd (IPR014001) - T[418-618] 1.9E-31
Pfam
DEAD/DEAH_box_helicase_dom (IPR011545) - T[424-586] 3.9E-22
ProSiteProfiles
Helicase_ATP-bd (IPR014001) - T[430-604] 22.675
SMART
AAA+_ATPase (IPR003593) - T[435-616] 0.0076
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[467-621] 2.66E-44 - T[787-921] 2.66E-44
ProSiteProfiles
Helicase_C (IPR001650) - T[787-959] 17.316
CDD
Helicase_C (IPR001650) - T[789-918] 4.56436E-19
Pfam
Helicase_C (IPR001650) - T[792-910] 4.5E-19
SMART
Helicase_C (IPR001650) - T[819-911] 3.8E-14
ProSiteProfiles
RLR_CTR (IPR021673) - T[976-1107] 21.821
Gene3D
RLR_C_sf (IPR038557) - T[976-1118] 5.9E-18
Pfam
RLR_CTR (IPR021673) - T[987-1099] 3.0E-16

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DHX58_HUMAN 28.775 % 220 1.42E-60
DDX58_HUMAN 28.939 % 227 2.38E-61
IFIH1_HUMAN 27.404 % 210 1.24E-55