- Transcript 'Moocul.CG.ELv1_2.S87...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S87487.g06784.02.t
Possible name(s)
PCDH11X; PCDH11Y; PCDHGB2
Gene model
Location
S87487 [17,952 / 27,052]
Amino acid sequence
Length: 1,399
>Moocul.CG.ELv1_2.S87487.g06784.02.p
MEVPWKFWKSIVLLFTLIHLSRCDEDIRKRIAEEKAINVYILNIPQELKKSIPPDAKFRI
ITGTDYVTITPNGDIRTKSKMDREEICPTNPAECAIDVEVLILTRVMPEMINVKLLLTDV
NDNAPVFENSRIEKEITELTAVGSVIRLDSAVDADYGDNSVAGYSIELVEQPGASKRTKP
YFKLEVIENADGTLIPQLILQRKFDREEMAVHELKLIATDGGRPPKTGIAHVRINVTDSN
DNQPTFAQEKYLFNVAEDTKPESVVAKVLATDLDKGINGKIKYTFPSVVSSSDRELFALN
QDTGEITLKDFLDYENKQMHHLTIEAEDMGPNPTSAYTTVTIKVLDVNDNKPEIKVKFFS
SDNVEEEEGSVTAVVPEDAEIGKYLAFVTITDGDKGLNGTVSCKMFSDLFALDKVKEDED
RYLLKTTRKLDRETKATHTLAIKANDFGTVPLTNQMNVVIKVGDVNDNAPTFDHKQFIAG
VRELSKNNTVFQKLKAQDKDEGDNARITYRFKESQDFIEAKGKKIFLTDLFAIDKDSGEV
RLIKEGVLDAETNLHPGQITVVASDNGAPSLNTTTILKISVIDDNDNIPQFDDEKDEFAF
TFPEHSSYGSFVGGVHASDNDVTKSSNAHITYSLKQSRRGGKIIRDPWFHFFKVSKEGEV
HFYGNSSKLDRESDHESPITFIVVARDSGEPTLSTQKLLKIYLTDINDNAPIVTSPNVTA
DVAFVQIPTGSSDMYYEGATGYSDTYMPSDYRQRRGRFASAVVIHQPVSSDGEFYPTLIR
IIAHDPDEAENSHISFAIADGNRNEYFVIDHKSGNISFAHDIEFENMKQGCHVLKVLVRD
LGKETMQTTTWVSIYVTEESEENSNATKAMLECKKNPLFPRDYGKEKVKAGGFGKYTIYI
IGGLAVLVCIIIIAIIIVLCVRCNCCGVGSEKKYPIGGGIYGANKRKRAKQNLYEPNPRQ
IESGGRTHPNGTVDSRSSFYSEWQQQQEKQDHVGNLPRQSNRNSVASHHSGRDSGTGDSM
PSDAYHGVHHQQHPRHPEYQEEMYPQYNEYPTNQYPPPPGPEDYQTHPDHANLVVNLPPE
GVFTGKCTDDCKMYGHSDACWMPDSLQRPVSRVTTFRGQEYESGSMKRVRQDPNDMRYTP
QSYYYDPVNKFDNEYPPYNTGTGGRGGGGFSSFQGSPQEPKRISQSQGPPGGFSPSNHPS
FRSNQGGPRMVPNQHDEANSNLSSTSSNNPNHYNHPRNQQQYYPHFQGYHEPPAGYNQPQ
YYDPSGYNPHGQGFQPPYQLEPSEGEPLNFEEDYSASNLLSPQDTDARYFLPSDNPLPGP
HSNYQAEYSMPYQEHETTDESKNLVNSDQGKDSQTSDEEKLKPIREDIDAEEVVNEINTL
LLDGSPNKSLDRRYYGNEV
Nucleotide sequence
Length: 4,590
>Moocul.CG.ELv1_2.S87487.g06784.02.t
TTACAGATTTCTATTATTATTATAAAAACATAAAGTGACTGGCTACTCCACTTCACAAAG
CATGGAGGTTCCTTGGAAGTTCTGGAAAAGCATTGTCTTGCTTTTTACGTTGATTCATTT
ATCAAGATGCGATGAGGACATACGGAAGAGGATAGCCGAAGAAAAAGCCATTAATGTCTA
CATCTTGAACATCCCACAAGAACTTAAAAAGTCGATTCCTCCAGATGCTAAATTCAGGAT
AATCACTGGCACTGATTATGTAACGATCACACCCAATGGGGATATAAGGACTAAAAGTAA
AATGGATCGGGAAGAAATTTGTCCAACAAATCCAGCGGAATGTGCAATTGACGTAGAAGT
GTTAATACTAACAAGAGTAATGCCAGAAATGATCAATGTGAAACTCTTGCTGACAGACGT
GAATGACAACGCGCCAGTGTTCGAAAACTCAAGAATTGAAAAGGAAATCACTGAACTGAC
TGCAGTAGGTTCGGTTATCCGATTGGATAGTGCTGTGGATGCTGATTATGGTGATAACTC
GGTTGCTGGATACTCAATCGAACTTGTGGAACAACCTGGTGCATCAAAACGAACCAAACC
TTACTTCAAACTGGAAGTGATCGAAAACGCAGATGGCACATTGATTCCACAATTGATCCT
GCAACGAAAATTTGATCGCGAGGAAATGGCTGTCCATGAGTTGAAACTGATCGCCACCGA
CGGAGGAAGACCACCTAAAACGGGAATTGCACATGTTCGAATTAACGTTACGGATTCGAA
CGATAATCAACCAACTTTTGCTCAAGAAAAGTACCTTTTCAATGTAGCGGAAGACACAAA
GCCAGAGTCAGTCGTCGCAAAGGTTTTGGCAACCGATTTGGACAAAGGCATCAATGGCAA
AATCAAGTACACTTTTCCAAGTGTGGTCAGTTCATCAGACCGTGAACTGTTTGCATTGAA
CCAAGACACTGGGGAGATTACTCTAAAGGATTTCCTTGATTATGAAAACAAGCAAATGCA
TCATTTGACGATTGAGGCAGAGGATATGGGACCGAACCCTACTTCCGCCTACACTACAGT
AACGATAAAAGTACTCGATGTAAACGACAACAAACCTGAGATCAAAGTTAAATTTTTCTC
ATCCGACAACGTGGAGGAAGAAGAAGGGTCAGTTACTGCAGTTGTCCCGGAAGATGCAGA
GATTGGAAAGTATCTGGCTTTCGTCACGATCACTGATGGTGACAAGGGACTGAATGGAAC
CGTGTCGTGCAAAATGTTTAGCGATCTTTTCGCTCTTGACAAAGTTAAAGAAGATGAGGA
TCGATATTTGTTGAAAACTACAAGAAAGTTGGATCGTGAAACTAAAGCGACGCACACACT
TGCGATCAAAGCGAACGATTTTGGAACTGTCCCATTGACGAATCAAATGAATGTTGTTAT
AAAAGTTGGCGACGTGAACGACAACGCACCGACATTCGACCACAAACAATTCATCGCAGG
CGTCAGAGAGCTGTCGAAGAACAACACGGTGTTTCAAAAACTCAAGGCACAAGACAAGGA
TGAGGGTGATAATGCCCGCATAACATACCGGTTCAAAGAATCACAAGATTTCATTGAGGC
TAAAGGCAAAAAAATATTCTTAACTGATCTTTTCGCCATTGATAAAGACTCTGGAGAAGT
TCGGTTGATAAAAGAAGGTGTCTTGGACGCAGAAACAAATCTTCATCCTGGTCAGATTAC
TGTAGTTGCCTCTGATAACGGAGCACCAAGCTTGAATACCACAACTATTTTGAAGATTTC
TGTCATCGACGACAACGATAACATTCCTCAATTCGACGACGAAAAAGACGAGTTTGCCTT
CACCTTCCCCGAACACAGCTCTTACGGATCATTCGTAGGCGGAGTTCATGCCTCAGATAA
TGACGTAACAAAATCAAGCAATGCTCATATCACGTATTCATTGAAGCAAAGCAGACGAGG
CGGTAAAATCATACGAGATCCCTGGTTTCATTTCTTCAAAGTGTCCAAAGAAGGCGAGGT
CCATTTTTATGGAAATTCGTCCAAATTGGACAGAGAATCTGACCACGAGAGTCCTATAAC
GTTCATCGTTGTGGCGAGGGATAGTGGAGAACCGACTTTGTCCACTCAAAAATTGTTGAA
AATTTATCTTACTGACATCAATGATAATGCTCCGATTGTTACAAGTCCAAACGTTACTGC
AGATGTTGCATTTGTCCAAATACCAACAGGTTCTTCGGACATGTATTACGAGGGAGCAAC
TGGATACTCTGATACTTACATGCCGTCGGACTATCGCCAACGACGCGGTCGATTTGCTTC
TGCTGTCGTCATACATCAACCTGTATCGTCAGACGGCGAATTTTACCCAACGCTTATCAG
AATCATCGCTCACGATCCTGATGAAGCTGAAAATTCACACATAAGTTTCGCAATTGCTGA
CGGAAATCGCAACGAATACTTCGTCATTGACCACAAGTCCGGAAACATTTCGTTCGCGCA
CGACATCGAATTTGAAAATATGAAGCAGGGATGTCACGTTCTCAAAGTCCTCGTTCGAGA
TCTCGGAAAGGAGACGATGCAAACGACGACATGGGTTAGTATCTACGTCACCGAGGAAAG
TGAAGAAAATTCAAACGCTACAAAAGCGATGTTGGAATGTAAGAAGAACCCGCTCTTTCC
ACGTGACTATGGAAAGGAGAAGGTGAAGGCGGGTGGATTTGGGAAGTATACTATCTACAT
CATCGGCGGTCTTGCTGTCTTGGTATGCATAATCATCATAGCAATCATTATTGTGCTATG
TGTTCGATGCAACTGCTGTGGTGTTGGTTCTGAGAAGAAATATCCAATTGGAGGAGGAAT
CTATGGAGCAAATAAACGAAAGCGTGCAAAGCAAAATTTATACGAACCAAATCCGCGACA
AATCGAATCAGGTGGCAGAACACATCCAAATGGCACGGTTGATAGTCGTTCGTCTTTCTA
CTCCGAATGGCAACAGCAGCAGGAGAAGCAGGACCATGTGGGAAATCTTCCTCGACAATC
GAACAGAAACAGCGTTGCTTCACATCATAGCGGACGGGATAGTGGAACCGGAGATTCCAT
GCCCAGTGATGCATACCATGGAGTTCATCACCAACAGCACCCACGCCACCCTGAATACCA
AGAGGAAATGTACCCACAATACAATGAATATCCGACCAATCAATACCCACCACCACCAGG
ACCAGAGGATTACCAAACTCATCCAGATCATGCGAATTTGGTAGTGAATTTGCCTCCGGA
GGGAGTTTTTACTGGCAAATGCACGGATGATTGTAAAATGTACGGTCACAGTGATGCGTG
TTGGATGCCCGATTCGCTTCAAAGACCCGTTTCCCGCGTCACGACGTTCAGAGGACAAGA
ATATGAATCCGGTTCAATGAAACGAGTCAGACAAGATCCAAATGATATGAGATATACTCC
TCAATCGTACTATTACGATCCTGTAAATAAATTCGACAATGAATATCCTCCCTACAACAC
TGGAACCGGAGGACGAGGTGGAGGAGGATTCTCATCTTTCCAAGGAAGTCCGCAAGAACC
TAAAAGAATTTCACAATCTCAGGGACCTCCCGGAGGATTCTCCCCATCCAATCATCCTTC
TTTCAGGAGTAATCAGGGAGGACCAAGGATGGTTCCCAATCAACATGATGAAGCCAATAG
CAACCTCTCCAGCACAAGCAGCAATAATCCTAACCATTATAACCACCCAAGAAATCAACA
GCAGTATTACCCACATTTCCAAGGATACCATGAACCCCCTGCCGGGTACAATCAACCCCA
GTATTACGATCCGAGCGGATACAACCCGCATGGTCAAGGCTTCCAACCTCCATATCAACT
GGAGCCAAGTGAAGGCGAACCTCTCAACTTTGAAGAAGATTATTCTGCATCAAATCTTCT
GAGTCCTCAGGATACCGACGCAAGATATTTCCTCCCTTCAGACAATCCTCTTCCTGGACC
TCATTCCAACTACCAGGCCGAATACAGCATGCCATATCAGGAACATGAGACCACGGACGA
AAGCAAGAACCTGGTTAACTCCGACCAAGGAAAGGATTCACAGACAAGCGATGAGGAAAA
ATTGAAACCCATACGAGAGGATATTGATGCTGAAGAAGTAGTCAACGAAATCAACACTCT
ACTTCTCGATGGCTCGCCAAACAAATCGCTAGATCGACGTTACTATGGAAACGAAGTTTG
ACGGCGGGAAGCTGCTTTAGATGAAGTTCTCTTGCCTAAAATGGTTCTATGCATGCGAAG
TTACCCGACCAACTAACTGGTGGATGGCCATGGCAGCTCTCGTCCAGTATATGTTTCGCA
TATTTTATCAGTTCCGCTTCGTCAGTCATTTACAAAAGCCATTATCATGTTTGCAAGCAT
TGTGACGTCACATAAACAAGTGATGACATCATTAAACAATATTGCAACTTATGCTCGCAA
CAAATTTTGTATTTTTATTATTTTTTTTTTGCATTTTTTTTATTTGACAAATTATATATT
ATTCTAACATTTGCTGAAGGAATAAAATTG
| SMART |
Cadherin (IPR002126) - T[48-125] 1.2 - T[149-244] 7.7E-14 - T[268-352] 3.8E-28 - T[388-470] 4.1E-17 - T[494-589] 1.2E-17 - T[615-711] 2.9E-14 - T[781-864] 9.2E-8 |
| PRINTS |
Cadherin (IPR002126) - T[64-83] 3.1E-24 - T[127-156] 3.1E-24 - T[211-223] 3.1E-24 - T[225-244] 3.1E-24 - T[244-257] 3.1E-24 - T[302-328] 3.1E-24 - T[336-353] 3.1E-24 |
| SUPERFAMILY |
Cadherin-like (IPR015919) - T[120-238] 6.57E-18 - T[234-360] 3.14E-32 - T[371-465] 1.31E-15 - T[460-592] 9.99E-22 - T[579-720] 5.14E-19 - T[775-857] 7.28E-13 |
| Pfam |
Cadherin (IPR002126) - T[135-237] 7.0E-9 - T[251-345] 7.4E-18 - T[373-462] 3.6E-10 - T[481-581] 6.0E-12 - T[599-703] 5.5E-7 - T[777-857] 8.3E-11 |
| ProSitePatterns |
Cadherin_CS (IPR020894) - T[234-244] . - T[342-352] . - T[460-470] . - T[701-711] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PC11Y_HUMAN | 28.725 % | 310 | 7.76E-87 |
| PC11X_HUMAN | 28.541 % | 311 | 3.72E-87 |
| PCDGE_HUMAN | 31.831 % | 304 | 8.79E-87 |