- Molecular Tool 'EpiB::dnSu(H)–CFP' >
- Transcript 'Moocul.CG.ELv1_2.S88...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S88472.g06904.01.t
Possible name(s)
LGR4; LGR5; LGR6
Gene model
Location
S88472 [6,957 / 24,643]
Amino acid sequence
Length: 1,276
>Moocul.CG.ELv1_2.S88472.g06904.01.p
MTFKPFIVFVIICCMKYCFATYRYDVTPDGDSIIPSQEPRRSTVDQNDDRNCPKVCQCEE
EALWGRKVTCKDQSLTGIPDSLLNRKETRFTAYLNLNLNHILTLPSKAFSGFPALRELHL
SGNFLQDIRSNMFAGLDSLQELYLQDNKIHTILPNTFAKIRTLRKLTLASNFIEIVSDKS
MAGLDNLEELSFDDNKLASIPTEAIKGLSKLKALDLQINELTEIPARAFRGLKLEVLLLS
HNKIRYIHDDAFAGQENMLILNLANNELNDFPRVISHLTGLRTLKLSGNRISVIPEHAFA
ENPNLSYLTLSDNPIRIIGRTAFVQLPHLETLYLEDIKDQKVFPNFEGCKRLTSLSLTGG
QIKDIPTDICYKLPSLYHLTVANNQLSNFSGLSHCRNLTSLDVSSNQIKEVTNADLANLK
KLQSIDLGSNAITSIQDEAFVGTNLRQMNLAYNYFTFLPVKGLRNLRELNVSGVQTMLYL
PPVELLPNLRKLSAFYPYHCCQLTAASRKSGMNKDEGSYPTSQMYANPFIRQPAYGMLPY
IQCGPNPGPLHPCDDLLPSNGLRGFGWLSLIIAVVLNVLLIIFFIAKYSLQRRIKRSSSA
ARCQGYFKEVLISEDDLGRNQSMNFVSCNLSFADLSVCGYLAILLIYDATTRGHFAEHGT
WWQQSSLCHVASFLLVFGTQLAFSSLVIMTLERYLVTMHPIDKHKHLRKTSLYLTMAASW
VFSSVTATVTLFGGDAYNGKGILPSLSSSTCLPWTTEFKYISILVSIHIVACIFTIFLCL
KMMCAKKKHSSWLSYHKNTKWQTAFTFSLNTSVILPLSVIALYIALVTNRPSNGRGHTIT
TEEKRDIITGNSYVDMQSILIFALTMIPLRCVLNILLYVAFNGQYRDFLLRLICIKSNSN
KKLTLVNSEYVSELQSIPPHGASSTSYDEPHYDTHTESTGYDTSLSQYAEYRANGMLAAR
NNLPSSDHSFNNQKSWKPLFAAREHNPHYKLSKPVYHGAVIDEVIEEDSSVNAQDEFRHF
GAKITRTYHDINGIDKPLMHSSPSRSSRSKRRPCGSTTESSSQCESENISTRSTAKHYDI
SALNNCTQLNTKEGSFLRRENARVESSKKSSSSRETSFDPGDVGVYTSVIMLPEENLIPD
EKTLTQSDINNFLPKLRNFEESHQFSGGPMYQSSIPDNVQQDQPVDRKQQRSSESYDSSK
DSGIHSEVDSRSVASDAGETQRVNLLVTSQKQLSTTTTHCDGREQNGNISKEVFFDRNRN
NIDYLSDSAYHLETTI
Nucleotide sequence
Length: 4,368
>Moocul.CG.ELv1_2.S88472.g06904.01.t
TTAGAAACGAACGTAATGAACCTAAAACGAAAGCTGAATAAATTTTAAATAAGCAACATA
ATCGAGCATTATGACGTTTAAACCTTTCATTGTTTTCGTCATAATATGTTGCATGAAATA
TTGTTTTGCAACTTATCGTTATGACGTCACACCGGATGGGGACAGTATTATTCCATCACA
AGAACCAAGGCGATCAACAGTGGACCAAAATGATGACCGGAATTGCCCAAAGGTCTGTCA
ATGCGAAGAAGAAGCTTTGTGGGGTCGAAAGGTCACTTGTAAGGATCAAAGTTTAACAGG
AATACCGGACTCCCTTCTAAATCGCAAGGAAACAAGATTCACAGCTTACTTAAACCTGAA
CTTGAACCATATTTTAACGCTTCCATCGAAAGCCTTCAGTGGATTTCCTGCTCTGAGAGA
ACTGCATTTGTCGGGAAATTTCCTTCAAGATATTCGATCCAACATGTTTGCTGGCTTGGA
CAGTTTACAAGAATTATACCTACAGGACAATAAGATTCACACAATACTCCCCAACACATT
CGCCAAGATTCGAACATTGAGAAAACTAACTTTGGCTTCAAATTTTATTGAAATTGTCTC
TGATAAATCCATGGCTGGTTTGGATAACTTGGAAGAATTGTCGTTTGATGACAATAAGCT
GGCCTCCATCCCCACAGAAGCAATCAAAGGCCTGTCCAAACTCAAAGCATTGGACCTCCA
AATCAATGAACTTACGGAAATTCCGGCGCGAGCATTTCGCGGTTTGAAATTGGAAGTATT
ATTGCTGAGTCATAATAAAATCAGATACATCCACGACGATGCATTTGCGGGGCAAGAAAA
CATGCTTATATTAAATCTTGCAAACAATGAATTAAATGATTTTCCGCGGGTTATTTCACA
TCTTACTGGATTGAGAACTTTAAAATTATCTGGGAATCGAATTTCAGTCATACCAGAACA
TGCATTTGCAGAAAATCCAAATCTATCATATTTGACTTTATCAGATAACCCGATACGAAT
CATAGGAAGAACAGCCTTTGTACAACTTCCCCATCTCGAAACTTTATACTTGGAGGATAT
TAAGGACCAAAAAGTTTTCCCAAATTTTGAAGGCTGCAAACGTTTAACATCATTGTCACT
TACTGGAGGACAAATTAAAGACATTCCAACTGATATCTGCTACAAACTGCCTTCACTTTA
TCATTTAACTGTCGCCAATAATCAACTCAGCAATTTTTCTGGTCTCAGTCATTGCAGAAA
TCTTACATCGTTAGATGTCAGTAGCAATCAAATTAAAGAGGTCACAAACGCTGATTTGGC
TAATTTGAAGAAACTTCAGTCAATTGACCTTGGATCCAACGCGATTACATCAATCCAAGA
TGAAGCATTTGTTGGCACCAATTTACGACAGATGAACCTGGCGTACAACTACTTCACATT
TCTACCAGTGAAAGGTTTAAGGAATTTGCGTGAGTTAAATGTGAGCGGAGTGCAAACGAT
GTTGTATTTACCACCCGTTGAATTGCTTCCAAACCTCAGAAAACTTTCCGCGTTTTACCC
ATACCACTGTTGTCAGCTGACGGCTGCTTCAAGAAAGTCTGGAATGAATAAAGACGAAGG
ATCATATCCAACAAGTCAAATGTATGCGAATCCATTCATACGTCAACCAGCTTATGGCAT
GCTGCCTTACATTCAATGTGGACCCAACCCTGGTCCCCTTCACCCATGTGATGACCTATT
ACCTTCAAATGGACTGAGAGGATTTGGATGGTTATCGCTTATCATTGCCGTGGTGCTCAA
TGTCCTCCTGATCATCTTTTTCATAGCAAAGTACTCATTACAAAGAAGAATAAAGCGCTC
TTCTTCCGCTGCACGTTGCCAGGGATATTTTAAGGAAGTTCTCATCAGTGAAGACGATTT
GGGAAGAAATCAAAGTATGAATTTCGTTTCGTGCAATTTATCGTTTGCCGATTTATCAGT
CTGTGGATATTTGGCAATTCTGTTGATATATGACGCAACCACTAGAGGTCACTTTGCAGA
ACATGGCACTTGGTGGCAGCAATCATCACTTTGTCACGTGGCTTCGTTTCTTTTGGTCTT
TGGAACACAATTAGCGTTTTCATCGTTAGTGATTATGACGTTGGAACGTTATCTTGTCAC
AATGCATCCAATCGACAAACATAAGCACCTTCGAAAGACGTCACTTTATTTGACCATGGC
AGCATCGTGGGTATTTTCATCAGTCACTGCAACAGTTACATTGTTTGGTGGTGATGCTTA
CAATGGTAAAGGAATACTTCCATCGCTCAGCAGTTCCACATGCTTACCATGGACAACTGA
GTTCAAATATATCAGCATTTTGGTGTCCATTCACATTGTGGCCTGCATCTTCACTATATT
TTTATGTCTCAAAATGATGTGCGCGAAGAAGAAGCACTCGTCATGGTTGAGTTATCACAA
GAATACAAAATGGCAAACTGCCTTCACATTCAGTTTAAATACTTCGGTTATTTTGCCATT
AAGTGTGATAGCTTTGTATATTGCTCTGGTCACCAACCGGCCCTCAAATGGACGTGGACA
CACAATTACAACAGAAGAAAAACGTGACATTATAACTGGAAATTCATATGTTGATATGCA
AAGTATCTTAATATTTGCCTTAACGATGATTCCATTGAGATGCGTTTTGAACATTCTGCT
TTACGTCGCCTTCAACGGACAGTACAGAGACTTTCTACTTCGGCTGATTTGCATCAAGTC
AAACTCGAACAAGAAACTTACTCTCGTCAACAGCGAATATGTTTCTGAACTTCAAAGTAT
TCCCCCACATGGCGCTAGTAGTACTTCATACGATGAACCGCATTATGACACGCACACCGA
ATCCACTGGATATGATACTTCACTCAGTCAATATGCTGAGTATCGTGCCAATGGTATGCT
TGCAGCCAGAAACAATTTACCTTCTAGCGACCATTCGTTTAATAATCAGAAAAGTTGGAA
ACCGCTATTCGCCGCCAGAGAGCATAATCCTCACTACAAATTGTCTAAACCTGTGTATCA
CGGAGCTGTTATTGACGAAGTAATTGAAGAAGATTCAAGCGTCAATGCACAGGATGAGTT
CCGCCATTTTGGTGCCAAAATCACTCGAACGTATCACGATATAAACGGTATCGACAAACC
TTTGATGCACTCCAGTCCAAGTCGATCTTCAAGAAGTAAACGCAGACCGTGTGGAAGTAC
AACGGAGTCCTCCAGCCAATGCGAAAGTGAAAACATCTCAACGAGAAGCACAGCCAAACA
TTACGACATTTCAGCGCTGAACAACTGCACACAGCTTAATACCAAAGAAGGGTCGTTTTT
AAGGAGGGAAAATGCAAGAGTTGAAAGTTCAAAAAAGTCTTCAAGCAGCAGAGAAACATC
TTTTGATCCTGGAGATGTTGGGGTTTATACATCAGTGATCATGCTTCCGGAAGAAAATTT
AATTCCAGATGAAAAAACTTTGACTCAGTCCGATATTAATAATTTTTTACCAAAACTTCG
AAACTTTGAAGAAAGTCATCAGTTCAGTGGCGGTCCAATGTACCAATCAAGCATCCCTGA
TAACGTCCAACAAGACCAACCTGTTGATCGGAAGCAACAGCGATCGAGTGAGTCTTATGA
TTCATCGAAAGATTCTGGAATTCATTCGGAAGTCGATTCACGAAGTGTCGCATCTGACGC
TGGCGAAACGCAGAGAGTGAATTTACTTGTTACGTCACAAAAGCAATTGTCAACAACAAC
CACTCATTGTGACGGTCGCGAACAGAATGGGAATATTTCAAAAGAAGTTTTCTTTGATCG
AAATAGAAATAATATAGACTATTTATCAGATTCGGCTTATCATCTGGAAACAACTATCTA
AGATGTCAATCATAATATATTTATTACGTCACAACTACCTAATATTATCGTTTATTACGT
ACTACATTTTTGAATATTGATGTATTTATGCATTTTGATTTTATATTATATATATTATAT
ATTGCATAATGTTGTCTCCACGAACAACATGTTTTTTTTTACTTGTGTTGTGATTTCCTC
AAGGTTCTGTTAATGCTTTAGCCTTATACTTTTTTGTATATTCTTGCCGTTGATTGTGTC
ACATTTTGTAGAGCAGATTGTTTCATGCTCGTCTTCTTCATCACTTATCATGGCGCCGTT
TGTAATAAACTTGTTTCATGACTTGCACAATTAATCGATGGATTTTCATGACTTTGCATT
TTTTTAAAGGTTTTTCTTTAAATTTTTGCCACGTCATCAGAAGCATGTTATTTCACTTTC
TTCATATTACATTCAAAATATGAGTTTATCAAAAAATAAAATACACAA
| Gene3D |
LRR_dom_sf (IPR032675) - T[48-176] 2.5E-28 - T[177-277] 1.2E-21 - T[279-563] 2.6E-56 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[90-111] 4.863 - T[114-135] 6.58 - T[138-159] 7.242 - T[162-183] 5.117 - T[186-207] 6.726 - T[210-231] 6.642 - T[233-254] 7.442 - T[257-278] 5.948 - T[280-301] 7.596 - T[304-325] 6.349 - T[351-372] 6.172 - T[375-396] 7.265 - T[397-418] 7.181 - T[421-442] 7.265 - T[444-467] 5.14 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[93-149] 1.8E-13 - T[186-244] 4.0E-13 - T[280-335] 8.0E-14 - T[351-408] 8.8E-9 - T[421-473] 3.9E-9 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[93-111] 200.0 - T[112-135] 0.024 - T[136-159] 0.0075 - T[184-207] 0.18 - T[208-231] 0.0025 - T[233-254] 0.97 - T[278-301] 9.6E-4 - T[303-325] 50.0 - T[373-395] 35.0 - T[396-418] 74.0 - T[419-442] 0.017 - T[443-465] 140.0 |
| ProSiteProfiles |
GPCR_Rhodpsn_7TM (IPR017452) - T[576-878] 15.537 |
| Pfam |
GPCR_Rhodpsn (IPR000276) - T[621-892] 2.1E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LGR6_HUMAN | 30.792 % | 296 | 2.44E-84 |
| LGR5_HUMAN | 28.571 % | 308 | 9.33E-89 |
| LGR4_HUMAN | 28.555 % | 311 | 2.13E-89 |