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TRANSCRIPT CARD

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  1. Clone 'CCTU698'
  2. Transcript 'Moocul.CG.ELv1_2.S92...'

Transcript Model

Transcript Id

Moocul.CG.ELv1_2.S92289.g07415.01.t

Possible name(s)

MUC4; SF3B1

Location

S92289 [2,664 / 6,711]

Sequences

Amino acid sequence

Length: 1,348

>Moocul.CG.ELv1_2.S92289.g07415.01.p
METTREDFVAQIEAVQRQKNALEASHDNGKNEQENNEDEEENAKLGGEAFFDQEIYGGSK
SKFAGYVTSIAPNEQEEDEDVEPSTATLLSKKQSYHAPTALLNEIPESEQDIDPFADTRS
QPIMNREDQYRRQRLQRVISPERHDPFADGGKTPDPQLAQYRDVMGTQNLTKEEREIRAR
ISEKMKSGDLKVSKEAKKEALQPQRKRRWDATPTNEAPKKKSTWDTGEATPQADRGLQSW
DETPGRVGLGSETPGSGITPGPNTRRWDATPSHISAGAATPGIGATPGHATPAAVGTTPS
VRKNRWDETPKTERETPGRSMGWAETPRVDQAGDDVVVPGGTSKRKSRWDLTPAAATPGN
QTPGSATPIFTPGGTPSTFTPKSAMGTPGSGATPSMFTPSGVTPAGTAAMGMQTPTPGQL
MSMTPEQLQTWRWEREIDERNRSLSDEELENMFPPGYKILQPPNGYIPIRTPARKITATP
TPMLQTGFHIQVEDKSVKGITDQPSGNLPFLKPDDIQYFDKLLVDVDEETLSPEEQKERK
IMKLLLKIKNGTPPMRKSALRQVTDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVI
DRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISVMRPD
IDNMDEYVRNTTARAFAVVASALGIPSLLRFLKAVCRSKKSWQARHTGIKITQQIAILMG
CAILPHLRNLVEIIEHGLEDEQQKVRTITALALAALAEAATPYGIESFDSVLKPLWKGIR
THRGKGLAAFLKAIGYLIPLMDAEYANYYTKEVMLILIREFQSPDEEMKKIVLKVVKQCC
GTDGVEAPYIKSDILPSFFKYFWNHRMALDRRNYRQLVDTTVEIANKVGPAEMIQRIVDD
LKDENEQYRKMVMETIDSILVNLGAAEIDHRLEEQLIDGILYAFQEQTNEDIVMLNGFGT
VVNTLGKRVKAYLPQICGTVLWRLNNKSAKVRQQAADLISRISIVMKTCQEEKLMGHLGV
VLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRLTPILKNRHEKVQENCI
DLVGRIADRGAEYVSAREWMRICFELLELLKAHKKSIRRATVNTFGYIAKAIGPHDVLAT
LLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKALSFLFE
YIGEMGKDYIYAVTPLLEDALMERDLVHRQIASSAIGHMALGVYGFGCEDALNHLLNYVW
PNIFETSPHVIQAVMSAIDGLRISLGPARLMQYCLQGLFHPARKVRDVYWKIYNGVYIGA
QDSVVPSYPRFYNDEKNQYVRYEMDYVI

Nucleotide sequence

Length: 4,047

>Moocul.CG.ELv1_2.S92289.g07415.01.t
ATGGAGACGACGAGGGAGGATTTTGTCGCACAGATCGAAGCTGTTCAACGACAGAAAAAT
GCGCTGGAGGCGAGTCATGACAATGGGAAAAACGAACAAGAAAATAATGAAGATGAAGAA
GAGAATGCAAAGCTCGGAGGAGAAGCGTTTTTTGATCAAGAAATTTATGGAGGTTCTAAA
AGTAAATTTGCAGGTTATGTGACTTCGATTGCACCAAATGAACAGGAAGAGGATGAAGAT
GTTGAACCATCAACTGCAACTCTTTTGAGCAAGAAACAATCATATCACGCTCCGACAGCA
TTACTGAATGAAATTCCAGAATCTGAGCAAGATATTGACCCATTTGCGGACACAAGATCA
CAACCAATTATGAATCGCGAAGACCAGTACAGACGACAGCGTTTGCAAAGAGTTATCTCG
CCCGAAAGACACGATCCATTTGCTGATGGTGGAAAAACACCAGACCCACAACTTGCTCAA
TATCGGGATGTTATGGGAACTCAAAATTTAACCAAAGAAGAACGAGAAATTCGTGCAAGA
ATCAGCGAAAAAATGAAATCTGGGGATTTAAAAGTTTCAAAAGAAGCAAAGAAGGAAGCA
TTGCAACCTCAGCGTAAAAGAAGATGGGATGCCACACCCACTAATGAAGCACCGAAGAAG
AAGAGCACTTGGGATACAGGAGAAGCCACACCACAAGCTGATCGTGGACTTCAGTCATGG
GATGAAACTCCTGGACGCGTTGGGTTGGGAAGTGAAACACCAGGTTCTGGTATTACACCC
GGTCCAAACACCAGACGTTGGGATGCAACTCCTAGCCATATTAGTGCAGGAGCAGCCACA
CCAGGTATTGGTGCAACACCAGGACACGCAACACCAGCTGCAGTTGGCACCACACCAAGT
GTGAGAAAAAATAGATGGGATGAAACACCAAAAACAGAACGGGAAACACCGGGACGGTCG
ATGGGTTGGGCAGAAACACCTCGTGTTGATCAGGCTGGTGACGATGTTGTTGTGCCTGGT
GGAACCAGCAAAAGAAAATCACGTTGGGATCTCACACCTGCGGCTGCCACACCTGGAAAT
CAAACACCAGGCAGTGCAACACCAATCTTTACACCGGGTGGTACACCTTCCACATTTACA
CCAAAATCTGCCATGGGTACACCGGGGTCTGGCGCCACACCGTCTATGTTTACACCATCT
GGGGTAACACCAGCTGGCACTGCTGCTATGGGTATGCAAACGCCAACCCCGGGACAGCTC
ATGTCAATGACACCCGAGCAATTACAAACTTGGAGATGGGAACGGGAAATTGACGAGAGA
AATCGATCACTTTCTGATGAAGAGTTAGAAAACATGTTTCCACCCGGATACAAAATTCTT
CAACCACCAAATGGGTACATTCCCATTCGAACTCCCGCCAGGAAAATCACTGCTACTCCG
ACACCCATGTTGCAAACGGGGTTTCATATCCAAGTGGAAGACAAATCTGTAAAAGGTATT
ACAGACCAACCTTCCGGTAATTTGCCTTTCTTGAAGCCAGACGACATTCAATACTTTGAC
AAACTTTTGGTTGATGTGGACGAGGAAACATTAAGCCCAGAGGAACAAAAAGAACGAAAA
ATCATGAAGTTATTGCTTAAAATTAAAAATGGCACCCCACCAATGCGTAAAAGTGCTCTT
CGTCAAGTTACAGACAAAGCAAGAGAGTTTGGAGCTGGTCCGTTGTTTAATCAAATACTT
CCTCTTTTGATGTCCCCAACACTTGAAGATCAAGAGCGCCATCTTCTGGTAAAAGTTATT
GATAGAATTTTGTACAAACTTGACGATTTAGTGAGACCTTATGTACATAAGATATTGGTC
GTTATCGAACCTTTGCTCATTGATGAAGATTATTACGCTCGTGTTGAAGGACGTGAGATT
ATTTCCAACCTTGCAAAAGCGGCTGGTCTTGCTACGATGATTTCTGTCATGCGACCTGAT
ATTGATAACATGGATGAGTATGTGAGAAACACAACAGCTCGTGCATTTGCCGTTGTAGCT
TCAGCTCTTGGCATTCCATCGCTTCTTCGATTTTTAAAAGCCGTGTGCAGAAGTAAAAAA
TCATGGCAGGCTCGGCACACCGGTATTAAAATCACTCAACAAATCGCCATTTTGATGGGA
TGTGCCATTCTCCCACATTTGCGAAATCTTGTTGAAATCATTGAACATGGTTTAGAGGAC
GAACAACAAAAGGTTAGAACCATCACAGCTCTTGCGTTGGCTGCTTTAGCCGAAGCTGCA
ACTCCGTATGGTATCGAATCTTTTGATAGTGTCTTGAAACCGCTTTGGAAGGGAATCCGA
ACCCACAGAGGAAAAGGTCTCGCTGCATTCTTGAAAGCCATCGGTTATTTGATTCCTCTT
ATGGACGCCGAATATGCAAATTATTACACCAAAGAAGTGATGTTGATTTTGATTCGAGAG
TTCCAGTCTCCCGATGAAGAAATGAAAAAGATTGTATTGAAAGTTGTAAAGCAATGCTGT
GGTACTGATGGTGTGGAAGCCCCTTATATCAAATCCGATATTTTGCCTTCGTTTTTCAAA
TACTTTTGGAATCACAGAATGGCGTTGGACCGAAGAAATTACCGACAGCTCGTCGACACG
ACCGTTGAAATCGCAAACAAAGTTGGTCCGGCGGAAATGATCCAAAGAATTGTCGATGAT
TTGAAAGATGAAAATGAACAATATCGTAAAATGGTGATGGAAACGATCGACAGTATTCTG
GTAAATCTTGGAGCAGCGGAGATCGATCACAGACTGGAAGAACAGTTGATTGATGGCATT
CTTTATGCCTTTCAGGAACAGACAAATGAAGATATCGTAATGTTAAATGGATTTGGTACC
GTCGTTAACACTCTCGGAAAGCGAGTCAAAGCATACTTGCCGCAGATTTGTGGTACGGTG
TTGTGGCGATTAAATAACAAATCCGCAAAGGTTAGACAGCAAGCAGCTGATCTTATATCG
AGGATATCAATTGTGATGAAAACATGCCAAGAAGAAAAACTGATGGGTCATTTGGGAGTT
GTGTTGTACGAATACCTGGGAGAAGAATACCCAGAAGTATTGGGGTCGATTCTTGGGGCT
TTGAAGGCCATTGTGAATGTGATAGGAATGCACAAAATGACTCCACCAATTAAAGATCTG
CTTCCGAGATTGACGCCAATTTTGAAAAACAGACATGAAAAAGTGCAAGAGAACTGCATA
GATCTTGTTGGTAGAATTGCTGATCGGGGTGCAGAATACGTCAGTGCCAGAGAGTGGATG
AGAATATGCTTTGAGTTGCTTGAATTGTTGAAAGCCCACAAAAAATCCATTCGTAGAGCA
ACTGTGAACACATTTGGTTACATTGCGAAAGCTATTGGCCCTCATGATGTACTCGCAACT
TTACTTAATAACTTGAAAGTACAAGAACGACAAAATCGTGTGTGCACGACGGTTGCTATA
GCAATTGTCGCCGAAACTTGTTCCCCTTTCACTGTTCTTCCTGCGCTCATGAATGAGTAC
CGAGTCCCTGAACTTAATGTACAAAATGGTGTTTTAAAAGCTCTTTCATTTCTGTTTGAA
TACATTGGTGAAATGGGAAAGGATTACATCTATGCAGTTACTCCCCTTCTTGAAGATGCC
TTAATGGAAAGAGATTTGGTCCACAGGCAAATAGCGTCATCAGCAATCGGTCACATGGCG
CTTGGTGTATATGGCTTTGGATGTGAAGATGCCTTGAATCACTTGCTCAACTATGTTTGG
CCAAACATTTTTGAAACTTCACCTCATGTGATACAAGCGGTCATGTCTGCTATAGATGGA
CTGCGAATTTCACTTGGACCTGCTCGATTGATGCAGTACTGCCTTCAAGGCTTGTTCCAC
CCTGCCCGAAAAGTTCGAGATGTGTACTGGAAGATTTATAACGGAGTGTACATTGGCGCA
CAAGACAGTGTTGTGCCGTCTTACCCACGCTTTTATAATGATGAAAAGAACCAGTACGTC
CGTTATGAAATGGATTATGTTATATAA

InterProScan

Pfam
SF3b_su1 (IPR015016) - T[342-495] 6.1E-41
SUPERFAMILY
ARM-type_fold (IPR016024) - T[544-630] 3.55E-98 - T[666-1145] 3.55E-98 - T[1183-1342] 3.55E-98
ProSiteProfiles
HEAT_type_2 (IPR021133) - T[730-768] 8.663
Gene3D
ARM-like (IPR011989) - T[1101-1313] 9.8E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SF3B1_HUMAN 77.474 % 2095 0