- Transcript 'Harore.CG.MTP2014.S4...' >
- Transcript 'Moocul.CG.ELv1_2.S94...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S94220.g07735.01.t
Possible name(s)
PPIL4; RBM3; SNRNP35
Gene model
Location
S94220 [10,311 / 16,278]
Amino acid sequence
Length: 414
>Moocul.CG.ELv1_2.S94220.g07735.01.p
MTQFLPPNLLALFAPRDPIPFKSPVCQLTWEKDRERTPYTGVGQLVHLFEDPKDTPAPTR
GETKEEKKKRRIKEKAVIRAKELEKEVKNWDPHGNKSATGDAFKTLFVARINYDTSESKL
RREFETYGPIRKIRMVQDVKNGKPRGYAFIEYEHERDMHTAYKSADGKKIDKRRVIVDVE
RGRTVKGWRPRRLGGGMGGTRRAANEDTKSREQERSRERERGGGERAGGGERAGGGERAG
GGERDRTRRRSRSTGRERERKKRSRSRDRERRDRDRDRDRSRRDKDRSDRDRDRDRKRDK
GERSTDTNDESRDRDRKHRHRDRSRERDRDGKKDRERRRSRDKDRGKSDRDKSEDVKPST
KTEESNGYSSNPNIKMENDEQPSYVNNNDYTDTNNQENTKEEPVQEESRMESYD
Nucleotide sequence
Length: 1,712
>Moocul.CG.ELv1_2.S94220.g07735.01.t
TATTTTATTTTTTTAGCTTGTTTATTGATCATTACCGTACTCAGTCTGTCTCCCAGTTTT
CTGTCATCCAGTTCAGAGTTGTTACCATCCTGCCAGTCAAGCTTCTGAACGACCTGCTCT
GCTGCTGACAGCCAGCTCATGCTAAGTGTTGTTGCAATTGTCTGTAAAAATTGAGTAGCA
GACAGGCTATCATATCGTACAACCATCTTGCTCCCATCAGTTTGCTTCCTCGCTTTTCAG
CCGAGGGTGACACTTTGACAAAAAGCGTGGACAGGTGGAATAAACAATATAAGAAATGAC
ACAATTTTTGCCTCCAAATCTTCTTGCACTTTTTGCTCCTCGAGATCCGATTCCGTTTAA
GTCACCTGTTTGTCAATTAACTTGGGAAAAGGACAGAGAAAGAACACCATATACGGGCGT
TGGACAACTTGTTCATTTATTCGAAGATCCTAAAGACACTCCTGCCCCCACAAGAGGTGA
AACAAAAGAAGAAAAAAAGAAACGAAGAATCAAGGAAAAGGCAGTCATCCGTGCTAAAGA
ACTTGAAAAGGAGGTGAAAAATTGGGACCCACATGGAAACAAATCTGCAACAGGGGACGC
TTTTAAAACATTATTTGTTGCTAGAATTAATTATGACACTTCTGAATCAAAATTGCGAAG
AGAGTTTGAAACATATGGTCCAATTCGAAAAATACGAATGGTGCAGGATGTAAAGAATGG
AAAACCACGTGGATATGCTTTCATTGAGTATGAACATGAACGAGATATGCACACTGCTTA
TAAAAGTGCTGATGGCAAGAAGATCGATAAACGCCGAGTCATTGTCGATGTGGAACGAGG
ACGAACGGTGAAGGGATGGCGTCCTCGACGTCTTGGTGGAGGAATGGGAGGAACAAGACG
TGCCGCAAATGAAGATACAAAATCACGGGAACAAGAGCGAAGTCGGGAAAGAGAGAGAGG
GGGAGGTGAACGTGCTGGTGGAGGTGAACGAGCTGGTGGAGGTGAACGAGCTGGTGGTGG
TGAACGAGATCGAACACGGAGAAGAAGCAGAAGTACCGGTAGAGAAAGAGAACGAAAGAA
GCGTTCGCGTTCTCGTGATCGTGAACGTCGGGATCGAGATCGGGATCGTGACCGTAGTAG
ACGTGACAAAGATCGATCTGACCGGGACAGGGATCGGGATCGAAAGCGGGACAAAGGTGA
ACGATCAACAGACACGAACGATGAAAGTCGTGATCGAGATCGCAAACATCGTCATCGCGA
TCGATCACGTGAACGAGATCGAGATGGAAAGAAAGATCGAGAGCGAAGAAGAAGTCGTGA
TAAAGATCGTGGAAAGTCCGACCGTGACAAATCAGAAGATGTAAAACCATCCACAAAAAC
GGAAGAAAGCAACGGATATTCGTCAAACCCAAATATTAAGATGGAAAATGATGAACAACC
ATCTTATGTCAATAACAATGATTATACTGACACCAACAATCAAGAGAACACAAAGGAAGA
ACCTGTCCAGGAGGAGTCTAGAATGGAATCGTACGACTAAAGTGACTACTACAAATCAAC
CTGCTTCGAACAACCATCATAATGAATGATTTCACTGCTGTAAGGATGATATGTATTGTA
CATATTGTATGGTTTTATTGTTAAATTTTATAGTACAAATCAACCCGTTTTTGTGTACCT
AATAAAATAAATTGTGGCCATACCAACTTCAA
| Pfam |
U1snRNP70_N (IPR022023) - T[3-94] 7.0E-23 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[91-215] 5.6E-33 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[97-202] 4.16E-27 |
| CDD |
snRNP70_RRM (IPR034143) - T[103-193] 1.07783E-57 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[104-182] 17.899 |
| SMART |
RRM_dom (IPR000504) - T[105-178] 8.6E-21 |
| Pfam |
RRM_dom (IPR000504) - T[106-175] 1.4E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| U1SBP_HUMAN | 51.546 % | 104 | 7.77E-26 |