- Transcript 'KH2012:KH.C8.640.v1....' >
- Molecular Tool 'En>Ngn (Stolfi 2011)' >
- Transcript 'KH2012:KH.C2.108.v1....' >
- Transcript 'KH2012:KH.C1.250.v3....' >
- Transcript 'Moocul.CG.ELv1_2.S96...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S96798.g08168.01.t
Possible name(s)
DAW1; PAFAH1B1; SPAG16
Gene model
Location
S96798 [245 / 5,864]
Amino acid sequence
Length: 597
>Moocul.CG.ELv1_2.S96798.g08168.01.p
VSVADDSDSEYQYEEVPIDDSESVDHKYIDEDLDYTVYAIEDRVRVEEVKETSVIQRPEV
VDDFVRNFLLKMGLTRSLDCFQAEWYELQQKGLLGEEDIGIVPDAYARNQDLIDEVKRLK
RELNKYKEAARKANDNYVKLQKERDYHKMHHKRVVQEKNRLITDLRRLKQHYNSYEPTLR
QLKHKYELAMKEKMLTKLERDRAVGQVNGLQATLRNLESGRNDPIPPLTGYRAERETTND
GPSQLAIREARKEYKQINAGGYDPAKDPTKNEPTKHPKDSKFPADDGVNPYLSMNYQTPA
HLTRTGGYRLTNTINAHEHPVSNLTLHPRKQIVVSASDDHLWKMWSLPDGEIIMTGDGHS
DWLSDCDFHPSGTKLATGSGDSSVKVWDFSKGSCVMTFNEHTHAVWGVSWHSCGDFVASC
SMDNTSKIWDINSERCRSTLRGHADSVNSIQYLHYSNTLLTSSADKTLSLWDGRTGLCAQ
TFYGHMHSVNQAIFNLKGQAVASCDSYGIVKIWDIRVIAPIANINVGPHPANRIAFDSSG
KLLAVASNDGTVKMIEVETGEFNYLPGHPDAVQSVVFDKAGQYLLSAGSDGTIRVWS
Nucleotide sequence
Length: 1,791
>Moocul.CG.ELv1_2.S96798.g08168.01.t
GTTTCGGTAGCAGATGATTCGGATTCTGAATATCAATATGAGGAGGTTCCAATTGATGAC
AGTGAAAGTGTTGATCATAAATATATCGATGAAGATTTGGACTACACTGTTTATGCGATT
GAAGACAGAGTTCGAGTGGAAGAAGTCAAAGAAACATCGGTTATACAACGTCCAGAAGTT
GTTGATGACTTTGTGAGGAATTTCCTTCTTAAGATGGGATTGACACGATCCTTAGATTGC
TTTCAAGCAGAATGGTATGAACTTCAACAAAAAGGTTTACTTGGGGAAGAAGATATTGGA
ATTGTTCCTGATGCATATGCGAGAAATCAAGATTTAATTGATGAAGTAAAGAGACTGAAA
AGGGAATTAAATAAATACAAAGAAGCAGCGAGGAAAGCGAATGACAATTACGTGAAACTT
CAGAAGGAAAGAGATTATCACAAAATGCACCACAAACGAGTTGTGCAGGAAAAGAACAGA
TTGATCACCGACCTCAGAAGATTGAAGCAACATTACAACTCTTACGAACCAACACTTCGA
CAATTGAAGCATAAATACGAACTCGCCATGAAGGAAAAAATGCTGACTAAACTTGAACGT
GACAGAGCTGTTGGACAAGTAAATGGTCTTCAAGCAACTCTGAGAAACTTGGAATCTGGA
AGGAATGATCCAATCCCACCACTTACTGGTTACAGAGCGGAACGAGAAACCACAAATGAC
GGACCTTCACAACTGGCAATTCGAGAAGCGCGAAAGGAATACAAACAAATAAATGCTGGT
GGATACGATCCTGCTAAAGACCCAACTAAGAATGAACCAACAAAACATCCTAAGGACAGC
AAATTCCCTGCAGATGATGGTGTTAATCCATATCTTTCCATGAATTATCAAACACCTGCT
CATTTGACGCGGACAGGCGGATATCGACTAACCAACACAATCAATGCCCACGAACACCCA
GTCAGCAATTTAACATTGCATCCGCGAAAACAAATTGTTGTGTCAGCATCTGATGACCAT
TTGTGGAAGATGTGGTCATTACCTGATGGTGAAATCATAATGACCGGTGATGGACATTCG
GATTGGTTATCAGATTGTGACTTCCATCCATCTGGTACGAAGCTTGCGACAGGAAGCGGT
GATTCAAGCGTGAAGGTTTGGGATTTCTCGAAAGGGTCGTGTGTGATGACCTTCAACGAA
CATACACATGCTGTGTGGGGTGTCTCATGGCATTCGTGTGGTGATTTTGTCGCTTCGTGC
TCCATGGATAACACTTCGAAAATATGGGATATTAACAGTGAACGATGCCGATCAACATTA
CGTGGTCATGCAGATTCCGTCAACAGCATTCAATATCTTCACTACTCGAATACCCTCCTG
ACATCATCAGCCGATAAAACACTTTCCTTGTGGGATGGAAGAACGGGGTTATGTGCTCAA
ACATTCTACGGCCACATGCATTCAGTGAATCAAGCAATATTTAACCTGAAGGGTCAAGCT
GTTGCTTCATGTGACAGTTATGGCATCGTAAAAATATGGGATATTCGTGTCATTGCGCCA
ATTGCTAATATTAATGTCGGTCCACATCCTGCAAACAGGATTGCATTTGACTCGTCAGGA
AAATTGCTTGCTGTTGCCAGTAACGACGGGACAGTGAAGATGATCGAAGTGGAAACGGGA
GAGTTTAATTACCTCCCAGGTCATCCTGATGCAGTACAATCAGTTGTGTTCGATAAAGCT
GGTCAATATCTTCTCTCAGCTGGTTCTGACGGAACCATTCGGGTTTGGTCT
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[301-420] 2.6E-33 - T[421-597] 4.2E-49 |
| SMART |
WD40_repeat (IPR001680) - T[307-346] 2.0E-4 - T[349-388] 5.7E-10 - T[391-430] 1.8E-9 - T[433-472] 4.7E-8 - T[475-514] 0.002 - T[517-556] 0.18 - T[558-597] 3.9E-7 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[308-596] 9.53E-78 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[314-355] 12.48 - T[356-397] 15.388 - T[398-439] 13.349 - T[440-481] 13.783 - T[482-516] 9.239 - T[565-597] 16.657 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[314-597] 60.244 |
| Pfam |
WD40_repeat (IPR001680) - T[352-388] 5.3E-6 - T[392-430] 1.4E-6 - T[435-472] 5.3E-6 - T[478-514] 0.049 - T[565-597] 8.7E-6 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[375-389] 2.4E-7 - T[417-431] 2.4E-7 - T[584-597] 2.4E-7 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[375-389] . - T[417-431] . - T[459-473] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPG16_HUMAN | 49.256 % | 622 | 0 |
| DAW1_HUMAN | 30.928 % | 151 | 2.34E-40 |
| LIS1_HUMAN | 31.538 % | 140 | 2.35E-36 |