Aniseed - Transcript Card

Transcript Model

Transcript Id

Moocul.CG.ELv1_2.S98532.g08515.01.t

Possible name(s)

SRSF12; SRSF2; SRSF8

Gene model

Moocul.CG.ELv1_2.S98532.g08515

Location

S98532 [16,073 / 18,089]

Sequences

Amino acid sequence

Length: 117

>Moocul.CG.ELv1_2.S98532.g08515.01.p
MSYNDRNDRGGGGGSGGDRSRLPPKIDGMYSLKVDNLTYRTSPETLKRSFAKYGEVGDVY
IPRDRYTRESRGFAFVRYYDKRDAEDAMDSMDGKPMDGRELRVQMASIRRNDNGQRG

Nucleotide sequence

Length: 379

>Moocul.CG.ELv1_2.S98532.g08515.01.t
TATTTTAACATTCAAGGTGAATTAAAATATGTCATACAATGATAGAAATGATAGAGGAGG
TGGTGGTGGAAGCGGTGGAGACCGAAGTCGTTTACCGCCAAAAATTGATGGAATGTATTC
CTTGAAAGTTGACAATTTGACATATCGAACATCACCTGAAACATTAAAACGTTCATTTGC
AAAATATGGCGAAGTTGGTGATGTGTACATTCCTAGAGACAGATACACTCGTGAAAGCAG
AGGATTTGCGTTTGTTCGATATTACGATAAACGTGACGCCGAAGATGCGATGGATTCCAT
GGATGGAAAACCAATGGACGGCCGAGAACTGCGTGTGCAGATGGCAAGTATCCGGCGAAA
TGACAATGGCCAGCGGGGG

InterProScan

SUPERFAMILY	RBD_domain_sf (IPR035979) - T[23-107] 9.81E-28
Gene3D	Nucleotide-bd_a/b_plait_sf (IPR012677) - T[25-117] 2.0E-26
ProSiteProfiles	RRM_dom (IPR000504) - T[30-108] 18.7
SMART	RRM_dom (IPR000504) - T[31-104] 6.8E-24
Pfam	RRM_dom (IPR000504) - T[33-102] 1.3E-20

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SRSF2_HUMAN	80.233 %	144	8.48E-45
SRSF8_HUMAN	65.217 %	126	6.02E-37
SRS12_HUMAN	47.059 %	78.6	6.63E-19