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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  2. Clone 'cien46735' > 
  3. Transcript 'KH2012:KH.C1.123.v1....' > 
  4. Transcript 'Moocci.CG.ELv1_2.S12...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S121111.g01951.01.t

Possible name(s)

AMY1A; AMY2A; AMY2B

Gene model

Moocci.CG.ELv1_2.S121111.g01951

Location

S121111 [5,019 / 8,062]

Sequences

Amino acid sequence

Length: 356

>Moocci.CG.ELv1_2.S121111.g01951.01.p
MKYLVLLALIGSAFAQYDPLFEEGHFGIVHLFEWHWSTIAEECERFLGPKKFGGVQCNNV
FYFTGRPWWERYQPISYGMTTRSGDEAALRDMVSRCNAVGVRVYADIVINHMCGNGGSGT
GTGGTYFNANHGQEDFPGVPYGKSDFNSCKSNIENYGDPNDFQVVNALMITNIHKICDLR
KIIDMMNHLLDMGIAGFRVDACKHMWPGDLQVIFQNTDDAFYPGSGIRPYIYQEVIDQGN
EPIKASEYTGLGQVTEFKYCGSVGNNADTVGYLSTVGESWGFMSSHDALIFLNNHDNQRG
HGGGGHVVTFEEPEKLKALTAYMLAYDYAIPRIMSSKVIETNAHSLFNLKFVLLCI

Nucleotide sequence

Length: 1,071

>Moocci.CG.ELv1_2.S121111.g01951.01.t
ATGAAATATCTGGTTTTGTTGGCGCTAATCGGCAGCGCTTTCGCCCAGTATGACCCATTA
TTTGAAGAAGGCCATTTTGGTATCGTCCACTTGTTTGAATGGCATTGGAGCACTATTGCG
GAAGAATGCGAAAGGTTTCTGGGACCAAAGAAATTTGGAGGTGTACAGTGCAATAATGTA
TTTTATTTCACAGGCAGGCCGTGGTGGGAACGGTACCAACCAATTAGCTACGGCATGACC
ACGAGATCAGGAGATGAAGCTGCTCTTAGAGACATGGTTTCTCGCTGCAATGCTGTGGGG
GTTCGGGTCTACGCAGATATTGTGATCAACCATATGTGCGGTAACGGGGGCTCAGGTACC
GGTACTGGTGGAACCTACTTTAACGCTAATCATGGCCAAGAAGACTTTCCTGGTGTCCCT
TACGGTAAAAGCGACTTCAACTCTTGCAAGTCTAACATCGAAAACTACGGTGACCCCAAC
GATTTTCAAGTTGTAAACGCCCTAATGATTACCAATATACATAAAATTTGCGATTTACGC
AAAATAATTGACATGATGAACCACCTTTTGGATATGGGGATAGCTGGTTTCCGAGTGGAC
GCGTGCAAGCATATGTGGCCAGGCGATCTTCAGGTTATTTTCCAAAACACCGATGACGCG
TTCTACCCGGGTTCAGGAATAAGACCTTATATTTACCAAGAAGTAATTGATCAAGGTAAC
GAACCAATTAAAGCTTCAGAATATACTGGATTGGGACAAGTTACAGAATTCAAATATTGT
GGTTCAGTTGGAAATAACGCTGATACCGTTGGTTATCTTTCAACTGTCGGTGAAAGCTGG
GGATTCATGAGCAGTCATGACGCTCTCATTTTCCTCAACAACCACGACAACCAACGAGGA
CATGGTGGGGGAGGACACGTTGTCACTTTTGAAGAACCTGAAAAATTGAAAGCTTTGACC
GCTTACATGTTGGCTTATGATTACGCTATACCTCGAATTATGTCAAGTAAGGTGATAGAA
ACAAATGCCCATTCCTTGTTTAACCTAAAGTTCGTTTTACTTTGTATTTAA

InterProScan

SUPERFAMILY
Glycoside_hydrolase_SF (IPR017853) - T[20-336] 5.6E-63
SMART
Glyco_hydro_13_cat_dom (IPR006047) - T[26-350] 1.1E-43
PRINTS
Alpha_amylase (IPR006046) - T[68-85] 5.1E-31 - T[100-111] 5.1E-31 - T[194-205] 5.1E-31 - T[230-248] 5.1E-31 - T[286-298] 5.1E-31
Pfam
Glyco_hydro_13_cat_dom (IPR006047) - T[83-308] 2.5E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
AMYP_HUMAN 49.861 % 335 6.35E-112
AMY1_HUMAN 49.582 % 328 1.99E-109
AMY2B_HUMAN 50 % 330 3.23E-110