- Transcript 'KH2012:KH.L116.39.v1...' >
- Transcript 'Moocci.CG.ELv1_2.S18...' >
- Transcript 'Moocci.CG.ELv1_2.S18...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S189998.g03812.03.t
Possible name(s)
PAX2; PAX5; PAX8
Gene model
Location
S189998 [27,645 / 37,703]
Amino acid sequence
Length: 713
>Moocci.CG.ELv1_2.S189998.g03812.03.p
MNLKLKSGSIIQVEHFFTFLLRIHSIVQSHGGVNQLGGVYVNGRPLPDPVRQRIVDMAHQ
GVRPCDIARQLRVSHGCVSKILARFYETGSIKPGVIGGSKPKVATPRVVEKICEYKRQNP
TMFAWEIRDRLLNECICDSDNVPSVSSINRIVRNKAAESSQQQQQNNMVKGLTPTGMHGA
ILDPMDITTRPSYTINGIASTNLPVGHHPSAVPNQGAYHHSSSPSSGSFTKHSAHLVYPA
SHQEAGILENGQLQMIGRAAVATVNPSYSPYAHQGIMTSPAVGYVNGHATPFSINENYQD
IRGVNYAGMSGDISPNSIRPAVTATGFYRADGNTPQNRFVTVKQEVNDPIDVINTMTSSS
PESLLAASNIPNPIIRVSAVSDFNSEQTYAEKSDVNSDQSQIKSNSARSSPGNGVSLIEL
QTSPSKKPFCQSGTNGYLYGQQSSSTLPSITLSSTRSEVEKVQTIGSIADYANMSEGATA
PNYANCEMPGSNHHSTEYPMSYNLSSSTSPKPGYDHQQHLSPNVNNQDRFQPSASIVASS
HYHSISSYSPYTSPIVQPTNILQPVNDTVSCESQPNPIAMSINDGNTRSDTSDMRCEPTG
SPGSHSSSSLSSSGSNNAFPNNISSTASNGYNISSGTEYSNTVTSTSSYRTPYGIQHFAS
GYPNGYGEEWPYTQLPMKSSENRPPNSTKEAHLDDLRLRAKEHCASIGLISAQ
Nucleotide sequence
Length: 2,194
>Moocci.CG.ELv1_2.S189998.g03812.03.t
ATGAATTTAAAACTTAAGAGCGGATCAATAATACAGGTCGAACATTTCTTTACTTTTTTA
CTACGAATTCACTCAATTGTCCAAAGCCATGGAGGCGTGAACCAGCTTGGTGGTGTTTAT
GTGAACGGACGCCCTCTACCGGATCCAGTTCGACAGCGAATAGTGGACATGGCACATCAA
GGTGTCCGACCTTGCGACATTGCAAGACAACTTAGAGTATCCCACGGTTGCGTCAGCAAA
ATATTGGCCAGGTTTTATGAAACTGGGAGTATTAAACCCGGGGTAATTGGGGGCAGCAAA
CCCAAAGTTGCGACCCCTAGGGTTGTGGAAAAAATATGTGAATACAAACGACAAAACCCC
ACTATGTTTGCTTGGGAAATCAGGGATCGCTTGCTTAATGAATGCATTTGTGATTCGGAC
AATGTTCCAAGCGTAAGCAGTATTAACAGAATTGTACGAAACAAAGCGGCTGAGAGTTCA
CAACAACAACAACAAAATAACATGGTCAAAGGGTTAACACCTACAGGCATGCACGGAGCC
ATTTTGGATCCAATGGACATAACAACTCGACCTTCTTATACAATCAATGGAATCGCCAGC
ACCAATCTACCAGTAGGACATCACCCTTCTGCAGTTCCAAACCAAGGGGCCTACCATCAC
TCTTCTTCGCCATCTAGTGGCTCATTTACAAAACACTCGGCACACTTGGTTTACCCGGCT
TCCCACCAAGAAGCTGGAATCCTTGAAAACGGCCAACTGCAAATGATTGGTCGCGCAGCA
GTTGCTACGGTAAATCCGAGTTATTCGCCGTACGCTCACCAGGGCATTATGACGTCACCA
GCAGTTGGATATGTGAATGGTCACGCGACTCCTTTTTCAATCAACGAAAATTACCAAGAC
ATAAGAGGAGTTAATTATGCAGGAATGTCGGGCGATATATCACCCAATTCTATCCGTCCC
GCTGTTACTGCTACTGGTTTTTATCGAGCGGATGGAAACACCCCTCAAAACAGATTTGTA
ACAGTGAAGCAAGAAGTTAACGACCCTATAGACGTCATCAACACAATGACCTCATCATCA
CCGGAAAGTTTACTCGCTGCTTCCAATATTCCTAACCCAATCATAAGAGTTTCAGCTGTT
TCTGATTTTAACTCCGAACAAACATATGCTGAGAAATCTGACGTGAACTCCGACCAATCT
CAAATAAAGAGCAATAGTGCCAGAAGCAGCCCTGGAAATGGCGTGTCTTTAATCGAACTC
CAAACCTCACCTTCTAAGAAACCGTTTTGCCAGTCAGGAACGAATGGTTATCTATACGGT
CAACAGTCATCTTCAACCCTGCCATCTATAACGCTTTCATCTACTAGAAGCGAAGTTGAA
AAAGTTCAAACTATCGGGTCGATAGCCGATTATGCAAACATGTCCGAAGGAGCAACAGCG
CCAAACTATGCAAACTGTGAGATGCCTGGTTCAAATCACCACTCCACCGAATACCCAATG
TCTTACAACCTATCAAGTTCCACTTCACCTAAACCTGGATACGACCACCAGCAGCATCTT
TCTCCAAACGTGAACAACCAAGATCGATTCCAGCCCTCCGCATCTATTGTTGCATCTAGT
CATTATCATTCCATATCATCATACTCTCCATACACATCCCCAATTGTCCAACCAACTAAC
ATACTGCAACCGGTCAACGATACAGTGAGCTGCGAAAGTCAACCCAACCCTATCGCAATG
AGTATTAATGATGGAAACACAAGGTCGGATACAAGCGACATGAGGTGTGAGCCTACTGGA
AGTCCTGGTTCTCATTCTTCCTCTTCCCTGTCATCTAGCGGAAGTAATAACGCTTTCCCA
AACAACATATCTTCCACCGCAAGTAACGGTTACAATATCTCTAGCGGAACAGAGTATTCG
AACACCGTTACATCTACAAGCTCTTACAGGACTCCTTACGGAATTCAACATTTTGCAAGT
GGATACCCAAACGGTTATGGAGAAGAATGGCCATACACCCAACTGCCAATGAAATCGTCT
GAAAACAGACCTCCAAATTCAACCAAAGAAGCTCATTTGGATGATTTAAGGCTACGGGCA
AAGGAGCATTGCGCATCTATTGGCCTCATCAGCGCACAATAAATGCAAACGAGAAGCATA
TAACGTACATAAACACGGAGAAAAATATAAACGG
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[22-97] 9.8E-40 - T[98-175] 1.9E-34 |
| ProSiteProfiles |
Paired_dom (IPR001523) - T[29-155] 62.036 |
| SMART |
Paired_dom (IPR001523) - T[29-153] 2.4E-90 |
| Pfam |
Paired_dom (IPR001523) - T[29-153] 8.5E-70 |
| CDD |
Paired_dom (IPR001523) - T[30-156] 3.77848E-77 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[31-154] 3.29E-39 |
| PRINTS |
Paired_dom (IPR001523) - T[33-48] 2.1E-41 - T[51-69] 2.1E-41 - T[71-88] 2.1E-41 - T[89-106] 2.1E-41 |
| ProSitePatterns |
Paired_dom (IPR001523) - T[63-79] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PAX5_HUMAN | 83.459 % | 246 | 1.2E-74 |
| PAX2_HUMAN | 85.271 % | 244 | 1.44E-73 |
| PAX8_HUMAN | 62.944 % | 241 | 2.63E-72 |