- Transcript 'KH2012:KH.L116.39.v1...' >
- Transcript 'Moocci.CG.ELv1_2.S18...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S189998.g03812.05.t
Possible name(s)
PAX2; PAX5; PAX8
Gene model
Location
S189998 [33,348 / 37,703]
Amino acid sequence
Length: 258
>Moocci.CG.ELv1_2.S189998.g03812.05.p
MNLKLKSGSIIQVEHFFTFLLRIHSIVQSHGGVNQLGGVYVNGRPLPDPVRQRIVDMAHQ
GVRPCDIARQLRVSHGCVSKILARFYETGSIKPGVIGGSKPKVATPRVVEKICEYKRQNP
TMFAWEIRDRLLNECICDSDNVPSVSSINRIVRNKAAESSQQQQQNNMVKGLTPTGMHGA
ILDPMDITTRPSYTINGIASTNLPVGHHPSAVPNQGAYHHSSSPSSGSFTKHSAHLVYPA
SHQVQIKMAPRCILGGEF
Nucleotide sequence
Length: 777
>Moocci.CG.ELv1_2.S189998.g03812.05.t
ATGAATTTAAAACTTAAGAGCGGATCAATAATACAGGTCGAACATTTCTTTACTTTTTTA
CTACGAATTCACTCAATTGTCCAAAGCCATGGAGGCGTGAACCAGCTTGGTGGTGTTTAT
GTGAACGGACGCCCTCTACCGGATCCAGTTCGACAGCGAATAGTGGACATGGCACATCAA
GGTGTCCGACCTTGCGACATTGCAAGACAACTTAGAGTATCCCACGGTTGCGTCAGCAAA
ATATTGGCCAGGTTTTATGAAACTGGGAGTATTAAACCCGGGGTAATTGGGGGCAGCAAA
CCCAAAGTTGCGACCCCTAGGGTTGTGGAAAAAATATGTGAATACAAACGACAAAACCCC
ACTATGTTTGCTTGGGAAATCAGGGATCGCTTGCTTAATGAATGCATTTGTGATTCGGAC
AATGTTCCAAGCGTAAGCAGTATTAACAGAATTGTACGAAACAAAGCGGCTGAGAGTTCA
CAACAACAACAACAAAATAACATGGTCAAAGGGTTAACACCTACAGGCATGCACGGAGCC
ATTTTGGATCCAATGGACATAACAACTCGACCTTCTTATACAATCAATGGAATCGCCAGC
ACCAATCTACCAGTAGGACATCACCCTTCTGCAGTTCCAAACCAAGGGGCCTACCATCAC
TCTTCTTCGCCATCTAGTGGCTCATTTACAAAACACTCGGCACACTTGGTTTACCCGGCT
TCCCACCAAGTGCAAATTAAAATGGCGCCGCGCTGTATTTTGGGCGGTGAATTTTAA
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[22-97] 2.0E-40 - T[98-176] 3.3E-35 |
| ProSiteProfiles |
Paired_dom (IPR001523) - T[29-155] 62.036 |
| SMART |
Paired_dom (IPR001523) - T[29-153] 2.4E-90 |
| Pfam |
Paired_dom (IPR001523) - T[29-153] 1.2E-70 |
| CDD |
Paired_dom (IPR001523) - T[30-156] 3.33208E-81 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[31-154] 4.18E-40 |
| PRINTS |
Paired_dom (IPR001523) - T[33-48] 6.6E-43 - T[51-69] 6.6E-43 - T[71-88] 6.6E-43 - T[89-106] 6.6E-43 |
| ProSitePatterns |
Paired_dom (IPR001523) - T[63-79] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PAX5_HUMAN | 83.459 % | 240 | 5.2E-78 |
| PAX2_HUMAN | 85.271 % | 238 | 8.73E-77 |
| PAX8_HUMAN | 64.062 % | 237 | 6.62E-76 |