Aniseed - Transcript Card

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S195305.g03984.01.t

Possible name(s)

MRPL4

Gene model

Moocci.CG.ELv1_2.S195305.g03984

Location

S195305 [82 / 1,341]

Sequences

Amino acid sequence

Length: 398

>Moocci.CG.ELv1_2.S195305.g03984.01.p
MLANLGCLSRLSRSLLNIAIKKSLNGSVKANYRSNNVVKKYSTVLQANYRSNNIVKKYST
VLQVPDNLIFVDTDEIELNELKLEQPLISDDTNVTRKVENLPNYQRPIKVWLDDFSTIEI
IYNEAIELHPEIFGCMPKMVYLANAIEWQKKYRVVDYDWKPVPTELGYGRKKPWPQKGTG
RARHGSTVAPQWKGGGFVHPPRGPKPLYYEQKTEERVQALASALAVRYLQDDLIVIKDFM
LNLEDENEMHIENVLKNRAFAPGTSVLIIHNSSGDDVTEKAQNLLSDHKRINLMSVLALN
VYSILKHDKLVLTLDAVNEIEKKLTWHMHRYDWLEKSHNFYSDIPFIDDKVSDFDDEANY
TKDEEEQCFDVHMKFEDWIDEPENYLPLCAKFEKGNTT

Nucleotide sequence

Length: 1,197

>Moocci.CG.ELv1_2.S195305.g03984.01.t
ATGCTTGCAAACCTGGGATGCTTATCACGACTTTCACGAAGTTTACTGAACATTGCAATA
AAAAAATCATTAAATGGATCCGTGAAGGCTAATTACAGAAGCAATAACGTTGTAAAGAAA
TATTCCACTGTCCTACAAGCTAATTACAGAAGCAATAACATTGTAAAGAAATATTCCACT
GTCCTACAAGTTCCTGATAATTTAATTTTTGTAGATACGGATGAAATAGAATTAAATGAA
TTAAAATTGGAACAACCTTTAATATCAGATGATACAAATGTTACAAGAAAAGTTGAAAAT
TTGCCAAACTATCAAAGGCCAATAAAAGTCTGGCTTGATGATTTCAGTACTATAGAAATT
ATTTACAATGAAGCCATAGAATTGCATCCAGAGATTTTTGGTTGTATGCCAAAAATGGTG
TATTTAGCTAATGCTATTGAATGGCAAAAGAAATACAGAGTAGTGGACTATGATTGGAAG
CCTGTGCCAACAGAGTTAGGTTATGGGAGGAAGAAACCATGGCCACAGAAGGGAACTGGC
CGAGCACGCCATGGCAGCACAGTGGCCCCGCAATGGAAGGGAGGTGGATTTGTCCACCCC
CCTCGTGGCCCCAAACCTCTTTATTATGAACAAAAAACGGAGGAACGTGTACAAGCTCTA
GCAAGTGCTTTGGCTGTGCGTTACTTGCAAGATGATTTGATTGTAATAAAAGATTTCATG
TTAAATTTGGAAGATGAAAATGAAATGCACATCGAAAATGTTTTAAAAAATAGAGCTTTT
GCGCCCGGAACATCTGTTTTAATTATTCATAACTCTTCTGGTGATGATGTTACAGAAAAA
GCTCAAAATTTATTATCAGATCACAAAAGAATAAATTTAATGTCTGTCTTAGCATTAAAT
GTCTATAGCATTTTAAAACATGACAAACTCGTTTTAACATTAGATGCAGTAAATGAGATA
GAAAAAAAATTAACTTGGCATATGCATCGTTATGATTGGTTAGAAAAATCCCACAATTTT
TATTCAGATATACCATTCATTGATGACAAGGTAAGTGACTTTGATGACGAAGCAAACTAT
ACAAAAGATGAAGAAGAGCAATGTTTTGATGTTCACATGAAATTTGAAGACTGGATTGAT
GAACCGGAAAATTATTTACCTTTATGTGCAAAGTTTGAAAAAGGAAACACAACATAA

InterProScan

Gene3D	Ribosomal_L4_dom_sf (IPR023574) - T[93-345] 7.9E-57
PANTHER	Ribosomal_uL4/L1e (IPR013005) - T[122-343] 4.9E-55
SUPERFAMILY	Ribosomal_L4_dom_sf (IPR023574) - T[124-324] 2.09E-42
Pfam	Ribosomal_L4/L1e (IPR002136) - T[126-322] 8.2E-37

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RM04_HUMAN	37.109 %	160	2.4E-46