- Transcript 'KH2012:KH.L40.24.v1....' >
- Transcript 'Moocci.CG.ELv1_2.S19...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S198428.g04114.01.t
Possible name(s)
KDM4A; PHF20; PHF20L1
Gene model
Location
S198428 [12,349 / 23,608]
Amino acid sequence
Length: 1,127
>Moocci.CG.ELv1_2.S198428.g04114.01.p
MASKQDDLQKDLDIIKGNDEVKERKSGAKGPGAARQQIKAKKKKKSLPINTAIKDNDSKV
SLAAVVRNKVAHKRGKTLSPTSIKSKTTVKSRRSLSSAKPTHPALGRIKVGAKLNSSTNS
DNSTPNKNPPLPKKSTPRSRGSMDPDAIPLEAIQFVEGSRIEAVDHGQWYKAKIVRVDND
KMEILVHFDGWGSKFDTWYPMTSTLIRGRTEIQTKDEVAFIEGEDVLARWTDGNYYPATV
ITVKDSGSCIVMYFDGMKKLIRKSLMKKMNEKEKKIATEAANKLLLLAPSMLDSASENVT
TPQQTTVTPQPKTPQPQKPPNTREDTPELNSKRKRGRPRKDSRDVTPAKEPRLDTSSVKK
ETPQTVENKSCENNLSKNSSQNEDLTNIKENVKVNSKAINEEELSKPKKAKIEKAPNEIN
SPKISSTVENHTAKINRLDNITSKIGPNDDKLSPEVKLPEYSNKRLISRCFVEITKKVDM
RGDPLQEQCVVCKKHSKRKKTKYYCPNYLGKKQVELYDRKLNFNYHTNKIRVQDLSEIPP
TTSKDLSQKSNVSSARPLSEPNKTDKFCKGSEVVATLNGNSYRCIVLKKLDNDDYKVQLK
RDSSEMIVKESDMKLSCIPPLRIPLTASMKRDHSPLTKDSTNLSPKDPLTKNASLSSKTA
QKDTNVSKTVNKTKPIESPATRKEKSLDRSSNLQEKVQSPTNLKKDEISKLVTQVAKTSS
LSKPKNSEEPKEEVEDPSKGPHATIKSCEVVLNKAESLDSIVVTGNIGTFVYTPSCRRNL
KPLIDKSSGKHKYTISHHKDSNFIRNKEAAPLRKIVGNTNEHSQMIPDMDSKKESSSLFI
SKKGQKPAKIMNGSYSKGHHNAKKIIYCRDEIVMVEWEGLWYQAKMLKRVNHNSYKVQFL
NGVEKVFKENAMKPWKPSESKGNADKTVDKSPPLPASAFQKMVIKKPSERTHSTELKSRV
KVPPPLSVEVGEVVLARWVDCKSYPATVIKINKNNDLVVKYYDGFTRTLSPNLVKQWAPK
TQLQSNIAPTSSLKIDKMNEKTVKPKDKPRTVPSPRHTAASTSTSNVETDHHKFKCRAPE
CNKTFRKESLMLQHHKHYHHQRYKFRDQDNSTLNAKKRKISKEDAYN
Nucleotide sequence
Length: 3,384
>Moocci.CG.ELv1_2.S198428.g04114.01.t
ATGGCATCAAAGCAAGACGACCTGCAAAAGGATCTTGATATTATAAAAGGTAATGATGAA
GTAAAAGAACGAAAGTCTGGGGCAAAAGGTCCTGGTGCAGCTCGGCAGCAAATTAAAGCA
AAAAAGAAAAAAAAGAGTTTACCTATTAATACTGCAATAAAAGACAACGACAGCAAAGTA
AGTTTGGCTGCCGTTGTTAGGAATAAAGTTGCACATAAGCGGGGGAAAACGTTATCACCT
ACAAGCATTAAAAGTAAAACCACTGTCAAAAGCAGAAGAAGTTTAAGTTCCGCTAAGCCT
ACACATCCAGCCTTAGGGCGAATAAAAGTAGGAGCCAAACTTAACTCCAGTACAAATTCA
GATAACTCAACGCCAAATAAGAATCCCCCTCTACCTAAAAAGTCCACACCACGCAGTAGA
GGAAGTATGGATCCTGATGCTATACCTTTAGAAGCTATCCAGTTTGTTGAAGGATCTCGT
ATTGAAGCTGTTGATCATGGTCAGTGGTACAAAGCCAAAATTGTTCGTGTTGATAATGAC
AAAATGGAAATTTTGGTTCATTTTGATGGATGGGGGTCTAAATTTGACACTTGGTATCCC
ATGACAAGCACTCTGATTAGAGGTAGAACTGAAATTCAAACTAAAGATGAAGTGGCATTT
ATTGAAGGGGAAGATGTTTTAGCCCGTTGGACTGATGGAAATTATTACCCAGCTACAGTT
ATTACTGTTAAAGATTCTGGTTCTTGCATTGTTATGTACTTTGACGGAATGAAAAAGCTA
ATACGAAAAAGTTTGATGAAAAAAATGAATGAAAAAGAAAAAAAAATTGCAACTGAAGCT
GCAAATAAACTTCTACTCTTAGCTCCTTCAATGCTCGATTCTGCTTCTGAAAATGTAACC
ACACCGCAGCAAACTACAGTTACACCACAACCTAAAACTCCGCAACCACAGAAACCACCA
AATACTCGAGAAGATACACCTGAATTGAATTCAAAGAGGAAACGAGGTCGTCCTAGGAAA
GATAGTCGTGATGTTACTCCAGCGAAAGAGCCACGGTTAGATACATCAAGTGTAAAGAAA
GAAACTCCGCAAACAGTTGAAAATAAAAGTTGTGAAAATAATTTAAGTAAAAACAGTTCT
CAAAATGAAGATCTTACAAATATAAAAGAAAATGTCAAAGTTAATTCAAAAGCAATTAAT
GAGGAAGAACTTTCAAAGCCCAAGAAAGCTAAAATAGAAAAAGCACCAAATGAAATCAAT
TCTCCTAAAATATCGTCAACTGTAGAAAATCACACCGCTAAAATAAATCGCCTAGACAAC
ATAACAAGTAAAATTGGGCCGAATGATGACAAGTTGTCGCCAGAAGTTAAATTACCAGAA
TACAGCAACAAACGTTTAATCTCGCGATGTTTTGTTGAAATAACGAAAAAAGTTGATATG
CGAGGGGATCCTTTGCAAGAACAATGTGTTGTTTGTAAAAAACATAGCAAGCGAAAGAAA
ACTAAATACTATTGTCCAAATTATTTAGGTAAGAAACAAGTCGAATTATATGATAGAAAA
TTAAACTTTAACTATCATACTAACAAAATTAGGGTTCAAGACCTGAGTGAAATTCCACCA
ACAACAAGTAAAGACCTTTCACAAAAGTCCAATGTTTCATCAGCTCGACCATTGTCAGAA
CCAAACAAGACAGACAAGTTTTGCAAGGGAAGTGAAGTAGTGGCAACACTAAATGGGAAT
TCCTATCGTTGCATTGTTCTGAAGAAGTTGGATAATGATGACTATAAAGTACAGTTGAAA
AGAGATTCATCTGAAATGATTGTGAAGGAATCTGATATGAAATTATCTTGTATACCCCCT
CTTCGAATTCCTCTAACTGCAAGCATGAAACGAGATCATTCTCCACTGACAAAAGACTCA
ACAAATTTGTCACCCAAAGATCCATTAACAAAGAATGCTTCTCTTAGTAGTAAAACAGCA
CAAAAAGACACTAATGTTTCAAAAACTGTTAACAAAACCAAACCCATTGAATCTCCTGCA
ACACGCAAAGAGAAAAGTCTTGATAGGTCTTCTAATCTTCAGGAAAAAGTACAATCACCT
ACAAATTTAAAGAAGGATGAAATATCAAAACTTGTGACTCAAGTTGCCAAAACTTCCTCT
TTAAGTAAACCTAAAAATTCTGAAGAACCTAAAGAAGAAGTTGAAGATCCTTCTAAAGGT
CCACATGCTACAATAAAAAGTTGTGAGGTAGTATTAAACAAGGCAGAGAGTCTAGATTCG
ATTGTTGTGACTGGTAATATTGGAACTTTTGTTTATACACCCAGTTGCAGAAGAAACCTC
AAACCTTTAATAGACAAGTCTTCAGGCAAACACAAATACACAATATCTCACCATAAAGAT
TCAAATTTTATTAGAAATAAAGAGGCAGCACCGTTAAGAAAGATAGTTGGAAATACAAAT
GAACATTCACAAATGATTCCAGATATGGATTCAAAAAAAGAATCCAGCAGTCTATTCATT
AGCAAGAAAGGGCAAAAACCAGCAAAGATAATGAATGGTAGTTATAGCAAAGGTCATCAC
AATGCTAAAAAAATTATATATTGCCGGGATGAAATAGTAATGGTTGAATGGGAGGGTTTG
TGGTATCAAGCAAAGATGCTTAAAAGGGTTAACCACAACAGCTATAAAGTCCAATTCTTG
AATGGGGTTGAAAAGGTGTTTAAAGAAAATGCAATGAAGCCATGGAAACCTAGCGAAAGT
AAAGGAAATGCGGACAAAACAGTCGATAAAAGTCCACCTCTTCCTGCTAGTGCTTTCCAG
AAAATGGTTATAAAAAAGCCATCGGAAAGAACACATTCTACAGAATTAAAATCACGAGTT
AAAGTCCCTCCACCACTAAGTGTTGAAGTTGGTGAAGTGGTTTTGGCTCGATGGGTTGAT
TGTAAAAGTTACCCTGCGACCGTTATAAAAATAAACAAGAACAATGACTTAGTTGTTAAA
TATTATGACGGATTCACAAGAACACTTAGCCCAAATCTTGTGAAGCAATGGGCGCCAAAA
ACCCAGCTTCAAAGTAACATTGCACCAACAAGTTCTCTAAAAATTGATAAAATGAATGAA
AAGACAGTAAAACCTAAGGATAAACCACGTACTGTACCATCACCTCGCCACACCGCCGCT
AGCACTAGTACTTCTAATGTTGAAACAGATCATCACAAGTTTAAGTGTCGGGCACCAGAA
TGCAATAAAACTTTCCGCAAAGAGTCTTTGATGCTGCAGCATCACAAACATTACCATCAC
CAACGATACAAATTTCGAGACCAAGATAATTCCACTCTGAATGCTAAAAAGAGAAAAATA
TCTAAAGAGGATGCCTATAATTAA
| PANTHER |
PHF20 (IPR037915) - T[5-123] 3.9E-28 - T[153-482] 3.9E-28 - T[651-751] 3.9E-28 - T[880-951] 3.9E-28 - T[969-1045] 3.9E-28 - T[1056-1119] 3.9E-28 |
| SMART |
Mbt (IPR004092) - T[125-215] 1.8E-4 |
| SMART |
Tudor (IPR002999) - T[153-208] 0.0044 - T[218-274] 6.0E-13 - T[565-621] 5.5 - T[865-920] 16.0 - T[966-1022] 0.0033 |
| SUPERFAMILY |
Chromo-like_dom_sf (IPR016197) - T[153-213] 1.37E-13 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[1074-1104] 10.783 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[1076-1100] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| P20L1_HUMAN | 33.333 % | 95.1 | 1.21E-19 |