Aniseed - Transcript Card

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S213815.g04648.01.t

Possible name(s)

VDAC1; VDAC2; VDAC3

Gene model

Moocci.CG.ELv1_2.S213815.g04648

Location

S213815 [27,820 / 30,200]

Sequences

Amino acid sequence

Length: 239

>Moocci.CG.ELv1_2.S213815.g04648.01.p
MSVPPSYADLGKSARDLFDKGYNYGFHKIDLKTKSKDGIEFTTKGSHSHDTEQINGSIET
KYKRCSEGLTVTEKWTTDNTLSFDVALEDKLAKGSKLTLCTSFSPSTGKKSGSLKSEYKR
DYFNMNFNTDLDFAGPTVQGAAVVGYEGWLAGYQFAFDTSKSALTKNNLALGYNGSDFQL
LTTVNDGSQFGGSIYQAVNKDLSTGAQLSWNSGQSNTKFSVAAKYAMDCNTTINSPLPY

Nucleotide sequence

Length: 786

>Moocci.CG.ELv1_2.S213815.g04648.01.t
TGTTTTTAGCTTGTATTTCATTAATTTTTTTCTTAATTAAAATAAATTTAACATAGTTTG
AAAATAATGTCTGTCCCACCTTCCTACGCTGATCTTGGAAAAAGTGCCAGAGATTTATTT
GACAAAGGATATAATTATGGTTTTCACAAAATTGATCTTAAGACCAAATCAAAAGATGGA
ATAGAATTTACAACAAAAGGGTCCCATTCTCATGATACTGAACAAATAAATGGTAGCATA
GAAACCAAGTACAAAAGGTGTTCAGAAGGCCTCACTGTCACAGAAAAATGGACCACTGAT
AACACACTATCATTTGATGTTGCACTTGAGGATAAACTTGCTAAAGGATCCAAACTTACA
CTGTGTACTTCCTTTTCTCCAAGCACTGGAAAGAAATCCGGATCACTAAAGTCTGAATAC
AAGCGCGATTACTTTAACATGAATTTTAACACCGATCTTGATTTTGCTGGACCAACTGTA
CAAGGCGCTGCTGTAGTAGGATATGAAGGATGGTTAGCCGGTTATCAATTCGCATTTGAC
ACTTCAAAATCCGCACTTACAAAAAATAATTTAGCTCTTGGATACAACGGAAGTGATTTC
CAACTTCTTACAACAGTCAATGATGGCTCACAATTTGGAGGATCAATTTACCAAGCGGTT
AATAAAGATCTTTCAACTGGGGCACAATTGTCATGGAACTCGGGTCAATCTAATACTAAA
TTTAGTGTAGCTGCTAAATATGCAATGGATTGCAATACCACTATAAATAGCCCTTTACCT
TATTAA

InterProScan

PANTHER	VDAC2 (IPR030277) - T[1-234] 3.7E-100
Gene3D	Porin_dom_sf (IPR023614) - T[1-235] 4.7E-97
Pfam	Porin_Euk/Tom40 (IPR027246) - T[4-232] 3.2E-64
PRINTS	Porin_Euk (IPR001925) - T[5-20] 8.4E-18 - T[68-83] 8.4E-18 - T[147-158] 8.4E-18

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
VDAC2_HUMAN	56.962 %	293	2.13E-100
VDAC1_HUMAN	57.456 %	285	2.68E-97
VDAC3_HUMAN	56.54 %	285	1.85E-97