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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  2. Transcript 'KH2012:KH.C3.566.v1....' > 
  3. Transcript 'KH2012:KH.C1.558.v1....' > 
  4. Transcript 'Boleac.CG.SB_v3.S132...' > 
  5. Transcript 'Moocci.CG.ELv1_2.S24...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S248730.g05698.01.t

Possible name(s)

FAT4; PCDHGB2; PCDHGB5

Gene model

Moocci.CG.ELv1_2.S248730.g05698

Location

S248730 [4,606 / 7,504]

Sequences

Amino acid sequence

Length: 411

>Moocci.CG.ELv1_2.S248730.g05698.01.p
MVKPADRFHLLYAALTIGFCHCGVEYDFGKHRWSPYMKPWMQHLDYNKITIEVEEGILEK
TRSIKNITFQQTDIANACLEHSKFIINDGKKRKKFRQLFELKLRQIQTPESVDHFIYKRS
ADDASNSSFSTVSTTVNTPTVPSLTSSTDYVTTTSSINTSTVTTSPLTTTLLSTLAPNTT
TKTVVEIFQVGDLDREKNSEYVLTLNLYNSNGEMVAMTTVIVIKVKDVNDNSPVIEDSSL
HTVVNTTVKKGEIVAQIVATDDDIGSYGELRYTIMEGTQKLVWDDNHEILRNPWVDILPF
SGSVLLMQSLEGTKTPVTLTFVVVVKDNSADDYLGNRDFGTVTVKFSDVESMFVVTPAPI
ITKNKLLIIIIPSTIGFMLLISAAAFVILRHRRTNSHPNVRGQLEFIKPVG

Nucleotide sequence

Length: 1,666

>Moocci.CG.ELv1_2.S248730.g05698.01.t
TCGTATACAGATTTTATAAAATGAACAAATAATCAAAGCCGCTATTTAGTGGACCACAGG
TGGTTTTCTACAAACAACTAGGCCTACTATGGTGAAACCGGCAGACCGCTTCCACTTATT
GTATGCTGCACTTACTATAGGTTTTTGTCACTGCGGAGTGGAATACGATTTTGGAAAGCA
CAGATGGTCACCTTACATGAAGCCGTGGATGCAACATTTAGATTATAACAAGATTACTAT
TGAAGTAGAAGAAGGGATTTTAGAAAAGACAAGATCTATAAAAAATATAACTTTTCAACA
AACTGACATAGCGAACGCATGTTTAGAACATTCGAAATTTATTATCAATGATGGAAAAAA
ACGAAAAAAATTTCGTCAATTATTTGAGTTAAAATTACGACAAATACAAACGCCAGAGTC
AGTCGATCACTTCATTTATAAACGAAGCGCGGATGACGCAAGCAACTCTAGTTTTTCAAC
TGTGTCGACCACCGTTAACACGCCCACTGTGCCCTCGTTGACGTCATCAACTGACTATGT
AACGACAACATCCAGTATTAATACTTCAACAGTAACCACAAGTCCATTAACTACAACGTT
GCTTAGTACATTAGCTCCTAACACAACTACTAAAACTGTGGTTGAAATATTCCAAGTAGG
AGACTTGGATAGAGAAAAAAATTCGGAATATGTATTAACTCTAAATTTGTATAATTCAAA
CGGGGAAATGGTTGCTATGACTACCGTAATTGTAATTAAAGTAAAAGATGTGAACGATAA
TTCTCCTGTAATAGAAGATTCCTCTTTACATACAGTTGTCAATACTACTGTAAAAAAAGG
TGAAATAGTTGCGCAAATAGTTGCTACGGACGATGACATTGGCTCTTACGGTGAGCTTCG
TTACACCATAATGGAAGGAACCCAAAAATTAGTCTGGGATGACAACCACGAAATTTTACG
AAATCCTTGGGTAGATATACTGCCATTTAGCGGATCGGTTTTATTAATGCAATCATTGGA
GGGTACAAAGACACCTGTTACTTTGACGTTTGTGGTCGTTGTTAAAGACAATAGCGCGGA
TGATTATCTAGGAAATCGAGATTTTGGGACGGTTACGGTGAAGTTCAGCGATGTTGAATC
GATGTTTGTTGTTACTCCGGCACCAATAATAACAAAAAACAAACTGTTAATCATAATTAT
TCCCAGCACAATTGGTTTCATGTTGCTTATATCGGCTGCAGCATTTGTCATTCTTCGACA
CCGACGAACAAACTCACATCCAAATGTTCGAGGGCAGCTTGAATTTATAAAACCTGTTGG
ATGATAATATACAGTAAACATGCTGTTATACTTGACAGAAAGGCAATGAAGGTTGTTGGT
GACGAGGTCAATATTAGTTACAGCCTCTACATTCTGTTCAAGACTATATTATACATTTCT
TTTAAAAGTGATGCTTGCTTGTAGTATTAAATTCTTATATACACTTCATTATCGTTGCAC
AGTACTAATTTTATCGCACAATTGTTATGTCTATGCAAGAGTCTTTTACTTTTTATTTGT
TAAAAAACTGTGTTGTGGATTCATTTATATTACCGTATTTAATAAACATATTTATATGTT
CTATTATTGCATTATATTAAAAATAAAAAACTCAACCATGCAAGTA

InterProScan

SMART
Cadherin (IPR002126) - T[116-233] 0.034 - T[257-354] 0.67
SUPERFAMILY
Cadherin-like (IPR015919) - T[186-235] 2.0E-6 - T[223-354] 2.43E-11
ProSitePatterns
Cadherin_CS (IPR020894) - T[223-233] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value