Aniseed - Transcript Card

Transcript 'Moocci.CG.ELv1_2.S24...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S248730.g05704.01.t

Possible name(s)

ARPP21; R3HDM1; R3HDM2

Gene model

Moocci.CG.ELv1_2.S248730.g05704

Location

S248730 [31,979 / 34,258]

Sequences

Amino acid sequence

Length: 149

>Moocci.CG.ELv1_2.S248730.g05704.01.p
MPIYPLLEATSPRSSSRIHTNGSNIRSNSQQRNVDKPPRMQRQKSNDSFNADSISECVDS
TGVDVFDFLTMTLRTNPKDRAILLKLEHGMIEFINNKMTDYMKFHPMTSYHRMLVHRVAA
YFGMDHNVDESGKCVIVNKTSITKMADKY

Nucleotide sequence

Length: 450

>Moocci.CG.ELv1_2.S248730.g05704.01.t
ATGCCTATATATCCATTATTAGAAGCCACCTCTCCCAGAAGTAGCAGCCGTATACATACC
AATGGATCAAATATAAGGTCAAACAGCCAACAAAGAAACGTTGACAAGCCGCCTAGAATG
CAACGCCAAAAGAGCAATGACAGTTTTAATGCAGATTCAATAAGTGAATGTGTTGATTCC
ACTGGTGTTGATGTATTTGATTTTTTGACCATGACTCTACGTACAAACCCGAAGGACCGT
GCAATACTTCTGAAACTTGAACATGGAATGATTGAATTTATAAACAATAAAATGACTGAC
TACATGAAGTTTCACCCAATGACTTCGTATCACCGAATGTTGGTTCACAGAGTGGCGGCT
TATTTTGGCATGGATCACAATGTCGATGAGTCAGGAAAATGTGTCATTGTGAACAAAACA
TCTATCACTAAAATGGCTGATAAATATTAA

InterProScan

Gene3D	R3H_dom_sf (IPR036867) - T[51-149] 3.9E-38
SUPERFAMILY	R3H_dom_sf (IPR036867) - T[52-145] 6.15E-28
SMART	R3H_dom (IPR001374) - T[66-140] 8.6E-9
ProSiteProfiles	R3H_dom (IPR001374) - T[80-143] 12.234
Pfam	R3H_dom (IPR001374) - T[83-139] 7.3E-12

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ARP21_HUMAN	54 %	119	3.18E-32
R3HD1_HUMAN	61.856 %	133	6.73E-37
R3HD2_HUMAN	59.794 %	131	3.26E-36