- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C7.309.v4....' >
- Clone 'AHC0AAA198YF21' >
- Transcript 'KH2012:KH.C6.122.v2....' >
- Transcript 'Moocci.CG.ELv1_2.S25...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S257646.g05979.03.t
Possible name(s)
CFAP52; PREB; WDR38
Gene model
Location
S257646 [11,557 / 18,355]
Amino acid sequence
Length: 442
>Moocci.CG.ELv1_2.S257646.g05979.03.p
MTSLIRLNFPLYCCSTLNDTLIAVAGGGGAAKTGVPNIIVIKLPTEILKQRELLLFEKKE
VVAYSRKELDVGSEAVMNMQVLQNKDSQDNNCKQGIIAFGLAGDCHLYSILKSSKPEDIN
QSDADGLRKRLNKNKNISTGTANKDSRNNNNIKSSLKNETFVFKKLLQIKTDFGEDPFQK
TVRISPNGLFFVTGGCDGYIRAWETNCGKKIFATQGHKDELTDIDISPDSEKIVTVSRDG
SACEWDSKKGLKLLDLHSIWNSQMITRKYRFKFCRYGKVPDKSTYVLFTAHVPTTMDRRQ
KKTCRLTKWSRRRKDGVENTNDPWRLSIMQPTGKETISAFEISSDGIFLGVGFMEGTVSI
YISFSLQVCFSYFIIEPNICVIKSFSFKEYLQCTNAKLFLIAAIITTNKPMGMKRSQTLF
AALYNGVYGAPSIQKLCVNICH
Nucleotide sequence
Length: 1,329
>Moocci.CG.ELv1_2.S257646.g05979.03.t
ATGACAAGCTTAATTCGATTAAATTTTCCCTTGTACTGCTGTTCTACACTTAATGATACA
CTAATTGCTGTAGCCGGCGGGGGAGGTGCTGCAAAAACAGGAGTTCCGAACATAATTGTA
ATCAAATTACCGACTGAAATATTAAAACAACGTGAGCTTTTGCTTTTTGAAAAAAAGGAG
GTAGTTGCTTATTCGCGCAAAGAATTGGATGTTGGAAGTGAAGCAGTTATGAATATGCAA
GTGTTACAAAACAAAGATTCACAGGACAACAATTGCAAACAAGGGATAATTGCTTTTGGG
TTAGCTGGAGACTGTCACCTATACTCAATACTTAAGTCGTCTAAACCTGAAGATATAAAC
CAAAGTGATGCAGATGGTTTAAGGAAGAGATTGAATAAAAACAAGAATATTAGTACCGGT
ACTGCAAACAAAGATTCAAGAAATAATAATAATATAAAAAGCAGTTTAAAAAATGAAACA
TTTGTATTCAAAAAACTTCTACAAATAAAAACAGACTTTGGAGAAGATCCTTTTCAGAAA
ACTGTTCGAATAAGTCCCAATGGGTTATTTTTTGTTACTGGAGGATGTGACGGGTACATT
CGCGCTTGGGAGACAAATTGTGGTAAAAAAATATTTGCTACTCAAGGTCACAAAGACGAA
TTGACAGATATTGACATCAGTCCGGATTCTGAAAAGATTGTAACTGTTTCAAGAGACGGT
AGTGCTTGTGAATGGGATTCTAAAAAAGGTTTGAAGTTGTTGGACTTGCATTCAATCTGG
AATTCTCAAATGATAACTAGAAAATATCGATTTAAATTTTGCAGGTATGGTAAGGTGCCA
GACAAATCGACATACGTCCTTTTTACCGCCCATGTGCCAACCACAATGGATCGAAGACAA
AAAAAAACTTGTCGTTTGACTAAATGGTCGCGCAGACGAAAAGATGGCGTTGAAAATACA
AATGATCCTTGGCGATTATCCATTATGCAACCAACAGGAAAAGAAACAATATCTGCCTTT
GAAATAAGCTCTGATGGAATATTTTTGGGTGTTGGATTTATGGAAGGAACAGTTTCAATT
TATATATCTTTCAGTTTACAAGTATGTTTTTCTTATTTTATTATCGAACCTAATATTTGT
GTAATTAAAAGCTTTTCATTTAAGGAATATTTACAATGCACTAATGCAAAATTGTTCTTG
ATTGCTGCTATTATTACAACAAATAAACCCATGGGAATGAAACGAAGTCAAACCCTCTTC
GCAGCACTTTATAATGGTGTTTATGGGGCACCAAGTATACAAAAACTATGTGTGAATATT
TGTCATTGA
| SMART |
WD40_repeat (IPR001680) - T[165-204] 1.5 - T[207-246] 8.7E-5 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[172-255] 16.48 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[181-250] 7.94E-19 - T[321-363] 7.94E-19 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[181-213] 9.339 - T[214-255] 11.21 |
| Pfam |
WD40_repeat (IPR001680) - T[213-246] 0.057 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PREB_HUMAN | 29.829 % | 132 | 1.55E-34 |