- Transcript 'Moocci.CG.ELv1_2.S26...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S263067.g06176.01.t
Possible name(s)
H1F0; HIST1H1E; HIST1H1T
Gene model
Location
S263067 [22,096 / 22,699]
Amino acid sequence
Length: 200
>Moocci.CG.ELv1_2.S263067.g06176.01.p
MSSAKKQRKPSEHPSYKDMITAALIAEKAPKGVSKSKIFQYICRNYQVGPNSGNQLRLSL
RRLLTSGYVVNTKGIGCSGSFKLGEKTISEQKKKAALNKKQQKLASKPKKQAPKKRAAPK
KKTAVSKVAKKPAQKVQKKPVAKKAKSSPKKKVVKKSPQKSARPAAKRTTQKKSKTPQKK
AAPKKKPAKKTQKRRSGSRK
Nucleotide sequence
Length: 603
>Moocci.CG.ELv1_2.S263067.g06176.01.t
ATGTCGTCAGCTAAGAAACAAAGAAAGCCTTCTGAGCACCCTTCATACAAGGACATGATT
ACGGCTGCTTTAATTGCGGAAAAAGCTCCAAAAGGTGTTTCAAAAAGCAAGATTTTTCAA
TATATTTGTCGAAATTACCAAGTCGGACCAAATTCTGGGAATCAATTAAGGTTGTCCTTA
CGAAGATTACTTACTTCTGGTTATGTTGTCAACACAAAAGGGATAGGATGCTCAGGTTCC
TTTAAATTGGGCGAAAAAACTATTTCTGAACAGAAAAAGAAGGCCGCTTTAAATAAAAAG
CAACAAAAATTGGCTTCCAAACCAAAGAAACAAGCTCCGAAAAAGAGGGCCGCACCGAAA
AAGAAAACTGCTGTTTCAAAAGTTGCTAAGAAACCGGCACAAAAAGTCCAAAAGAAGCCC
GTAGCTAAAAAGGCAAAATCGTCACCAAAGAAGAAGGTCGTAAAAAAATCTCCTCAAAAA
TCGGCCAGGCCAGCAGCGAAGAGAACGACGCAAAAAAAATCAAAAACGCCACAGAAGAAA
GCAGCACCAAAAAAGAAACCGGCAAAGAAAACTCAAAAACGACGATCGGGATCAAGAAAA
TAA
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[7-100] 2.3E-24 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[9-95] 6.53E-18 |
| SMART |
Histone_H1/H5_H15 (IPR005818) - T[10-75] 8.6E-16 |
| ProSiteProfiles |
Histone_H1/H5_H15 (IPR005818) - T[12-85] 23.14 |
| Pfam |
Histone_H1/H5_H15 (IPR005818) - T[13-83] 8.7E-20 |
| PRINTS |
Histone_H5 (IPR005819) - T[26-43] 1.2E-22 - T[46-64] 1.2E-22 - T[67-91] 1.2E-22 - T[103-117] 1.2E-22 - T[140-157] 1.2E-22 - T[162-181] 1.2E-22 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| H10_HUMAN | 48.75 % | 87.8 | 9.77E-22 |