- Clone 'ma317j15' >
- Molecular Tool 'Mitf>Stable b-catenin' >
- Transcript 'Phmamm.CG.MTP2014.S8...' >
- Transcript 'Moocci.CG.ELv1_2.S26...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S26363.g00214.02.t
Possible name(s)
DAW1; PAFAH1B1; SPAG16
Gene model
Location
S26363 [27,709 / 40,093]
Amino acid sequence
Length: 675
>Moocci.CG.ELv1_2.S26363.g00214.02.p
MNTTNANPEESAFYLEHVSVADDSDSEYQYEEVPIDDEESITVEGEDLDHTVYAIEDRIQ
DGRASTRTEAVPAPSVIHRPEVVDDFVRNFLLKMGMSRTLDCFQAEWYEMQQKGLLGDED
VGVVPDAYVRNQSLNEEVKKLKNELNKFKTAARKAKDNYVGLQKERDYHKMHHKRVVQEK
NRLITDLKRLKQHYQSYEPTLRQLKHKYELAMKEKMLTRLERDRAVGQVNGLQATLRNLE
TGRNDPIPPISGYRSEREVMSDGPSQMKIREARQKDVEPGGYDPSKDPTKNKPKKHPKDS
VFPADDGVNPFLSMDQSTPTHLTRTGGYRLTNTISAHEHPVSNLTLHPRKQIVVSASDDH
LWKMWSLPDGEIIMTGDGHTDWLSDCNFHPTGTKLATSSGDASVKIWDFSKGSCVQTFNE
HTHAVWGVSWHSCGDFVASCSMDNTSKIWDIGSERCRATLRGHADSVNSIQFLHYSNTLL
TSSADKTISLWDGRTGLCAQTFYGHMHSVNQAVFNLKGSIVASCDSYGMVKLWDIRMIAS
IANVNVGPHPANRIAFDPSGKIITIENNICHLSSTGSIVASCDSYGMVKLWDIRMIASIA
NVNVGPHPANRIAFDPSGKLIAVASNDGTVKMIEVETCEFNYLPGHPDAVQAVAFDRAGQ
YLLSGGSDGTIRMWS
Nucleotide sequence
Length: 2,277
>Moocci.CG.ELv1_2.S26363.g00214.02.t
AGCCTAGTACAACAGTCTAATTAGGCTTGGTAGTATTGTTGAAAGAATAAGAAGACTGTT
TATATTTTGGCCATGAATACAACCAACGCAAATCCTGAAGAAAGTGCATTTTATTTAGAA
CATGTGTCAGTTGCGGATGATTCAGATTCTGAATATCAGTATGAAGAGGTCCCCATCGAT
GATGAAGAAAGTATAACAGTAGAAGGTGAAGATTTGGACCACACCGTTTACGCTATAGAA
GACAGAATTCAAGATGGTCGTGCTTCAACTCGAACAGAAGCTGTACCTGCCCCATCTGTT
ATTCACCGTCCTGAAGTTGTGGACGATTTTGTACGTAATTTTTTGCTCAAAATGGGAATG
TCACGAACGTTGGATTGCTTTCAAGCTGAATGGTATGAAATGCAACAGAAAGGATTGCTT
GGTGATGAAGATGTAGGTGTTGTTCCAGATGCTTATGTTAGAAATCAAAGTTTAAATGAA
GAAGTGAAAAAATTGAAAAATGAACTGAACAAGTTCAAAACAGCAGCTAGAAAAGCAAAA
GATAACTATGTCGGTCTTCAGAAGGAGAGGGACTATCATAAAATGCATCATAAGCGTGTG
GTACAGGAGAAAAATAGACTTATAACTGATCTTAAACGATTAAAGCAACATTACCAATCA
TATGAGCCTACACTGCGCCAACTCAAACATAAATATGAGCTCGCAATGAAAGAAAAAATG
TTGACTCGTCTTGAGAGGGACCGGGCAGTTGGTCAGGTGAATGGATTACAAGCGACGTTA
CGCAATCTTGAAACAGGTCGAAATGATCCAATTCCACCAATAAGTGGCTACCGATCCGAA
AGGGAGGTTATGAGTGATGGACCTTCCCAAATGAAAATCCGTGAAGCTCGACAAAAAGAT
GTGGAACCCGGTGGTTATGATCCTTCTAAAGATCCAACTAAAAACAAACCAAAGAAACAT
CCTAAAGACAGCGTTTTCCCTGCTGATGACGGTGTAAATCCATTTTTATCAATGGACCAA
TCAACCCCCACTCATTTGACTCGAACTGGTGGTTATCGTCTTACCAACACAATAAGTGCT
CATGAGCATCCTGTCAGCAACTTGACACTGCATCCGCGTAAGCAAATCGTTGTATCCGCA
TCTGATGACCATCTGTGGAAAATGTGGTCACTACCAGACGGCGAAATTATAATGACGGGT
GATGGACATACAGATTGGTTGTCTGATTGTAATTTTCATCCTACAGGTACGAAGCTGGCA
ACAAGCAGTGGAGATGCCAGTGTTAAAATATGGGACTTTTCAAAGGGTTCATGTGTACAA
ACGTTTAACGAACATACACACGCAGTTTGGGGGGTGTCATGGCATTCTTGTGGTGATTTT
GTCGCATCTTGTTCAATGGACAACACCTCCAAAATATGGGACATTGGCAGTGAGCGGTGT
AGAGCAACATTACGAGGCCATGCTGACTCTGTCAATAGCATTCAATTCCTACACTACTCT
AATACTTTGCTAACATCGTCTGCGGATAAAACCATTTCATTGTGGGATGGCAGAACGGGT
TTATGTGCGCAAACGTTTTATGGTCATATGCATTCTGTCAACCAAGCTGTGTTTAATTTA
AAGGGCAGCATAGTAGCGTCATGTGATAGCTATGGTATGGTGAAACTGTGGGACATTAGG
ATGATTGCTTCAATTGCCAATGTTAACGTTGGGCCACACCCTGCTAATCGAATTGCCTTT
GATCCATCTGGTAAGATAATCACAATCGAAAATAACATATGTCATCTAAGTAGCACAGGT
AGCATAGTAGCGTCATGTGATAGCTATGGTATGGTGAAACTGTGGGACATTAGGATGATT
GCTTCAATCGCCAATGTTAACGTTGGGCCACACCCAGCTAATAGAATTGCTTTTGATCCA
TCTGGTAAACTGATTGCTGTAGCAAGCAACGATGGAACAGTGAAAATGATCGAAGTTGAA
ACATGTGAATTCAACTACCTGCCCGGGCATCCAGACGCTGTTCAAGCTGTGGCATTTGAC
CGTGCAGGACAGTATTTACTCTCTGGAGGGTCTGATGGAACAATCAGGATGTGGTCTTAA
AGTTCCGCTTTTGTTCTTTTATTTTACTCACTGTACATCACCAATATTGATTGTTTTTAT
AATATTTAGTCTTTTATTATCACAGCTGGGTTTTTTTTCTCAAATATAATTTATTTTTAA
TTTCTACCCATATTTTATTCCCTTTTATAATGATAAAGTGAAGGCATAAATGATTTT
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[314-441] 2.4E-33 - T[442-566] 8.5E-32 - T[567-675] 1.1E-23 |
| SMART |
WD40_repeat (IPR001680) - T[327-366] 1.6E-4 - T[369-408] 9.1E-9 - T[411-450] 1.3E-9 - T[453-492] 2.7E-9 - T[495-534] 2.3E-4 - T[558-592] 49.0 - T[595-634] 0.2 - T[636-675] 1.5E-7 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[328-675] 2.43E-78 |
| Pfam |
WD40_repeat (IPR001680) - T[331-366] 0.21 - T[372-408] 1.7E-4 - T[412-450] 1.3E-6 - T[455-492] 6.7E-7 - T[498-534] 0.034 - T[610-632] 0.16 - T[643-675] 1.6E-6 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[334-675] 59.69 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[334-375] 12.48 - T[376-417] 14.619 - T[418-459] 12.814 - T[460-501] 14.418 - T[502-536] 9.773 - T[643-675] 16.925 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[395-409] 4.1E-7 - T[437-451] 4.1E-7 - T[662-675] 4.1E-7 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[395-409] . - T[437-451] . - T[479-493] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPG16_HUMAN | 45.037 % | 600 | 0 |
| DAW1_HUMAN | 27.794 % | 154 | 6.12E-41 |
| LIS1_HUMAN | 26.403 % | 138 | 1.53E-35 |