- Clone 'AHC0AAA223YD07' >
- Clone 'AHC0AAA224YH04' >
- Clone 'AHC0AAA222YP03' >
- Transcript 'Moocci.CG.ELv1_2.S26...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S26363.g00214.03.t
Possible name(s)
DAW1; PAFAH1B1; SPAG16
Gene model
Location
S26363 [29,422 / 40,093]
Amino acid sequence
Length: 610
>Moocci.CG.ELv1_2.S26363.g00214.03.p
MLVKWRCMLNVSVADDSDSEYQYEEVPIDDEESITVEGEDLDHTVYAIEDRIQDGRASTR
TEAVPAPSVIHRPEVVDDFVRNFLLKMGMSRTLDCFQAEWYEMQQKGLLGDEDVGVVPDA
YVRNQSLNEEVKKLKNELNKFKTAARKAKDNYVGLQKERDYHKMHHKRVVQEKNRLITDL
KRLKQHYQSYEPTLRQLKHKYELAMKEKMLTRLERDRAVGQVNGLQATLRNLETGRNDPI
PPISGYRSEREVMSDGPSQMKIREARQKDVEPGGYDPSKDPTKNKPKKHPKDSVFPADDG
VNPFLSMDQSTPTHLTRTGGYRLTNTISAHEHPVSNLTLHPRKQIVVSASDDHLWKMWSL
PDGEIIMTGDGHTDWLSDCNFHPTGTKLATSSGDASVKIWDFSKGSCVQTFNEHTHAVWG
VSWHSCGDFVASCSMDNTSKIWDIGSERCRATLRGHADSVNSIQFLHYSNTLLTSSADKT
ISLWDGRTGLCAQTFYGHMHSVNQAVFNLKGSIVASCDSYGMVKLWDIRMIASIANVNVG
PHPANRIAFDPSGKLIAVASNDGTVKMIEVETCEFNYLPGHPDAVQAVAFDRAGQYLLSG
GSDGTIRMWS
Nucleotide sequence
Length: 2,010
>Moocci.CG.ELv1_2.S26363.g00214.03.t
ATGCTTGTCAAATGGCGGTGCATGCTAAATGTGTCAGTTGCGGATGATTCAGATTCTGAA
TATCAGTATGAAGAGGTCCCCATCGATGATGAAGAAAGTATAACAGTAGAAGGTGAAGAT
TTGGACCACACCGTTTACGCTATAGAAGACAGAATTCAAGATGGTCGTGCTTCAACTCGA
ACAGAAGCTGTACCTGCCCCATCTGTTATTCACCGTCCTGAAGTTGTGGACGATTTTGTA
CGTAATTTTTTGCTCAAAATGGGAATGTCACGAACGTTGGATTGCTTTCAAGCTGAATGG
TATGAAATGCAACAGAAAGGATTGCTTGGTGATGAAGATGTAGGTGTTGTTCCAGATGCT
TATGTTAGAAATCAAAGTTTAAATGAAGAAGTGAAAAAATTGAAAAATGAACTGAACAAG
TTCAAAACAGCAGCTAGAAAAGCAAAAGATAACTATGTCGGTCTTCAGAAGGAGAGGGAC
TATCATAAAATGCATCATAAGCGTGTGGTACAGGAGAAAAATAGACTTATAACTGATCTT
AAACGATTAAAGCAACATTACCAATCATATGAGCCTACACTGCGCCAACTCAAACATAAA
TATGAGCTCGCAATGAAAGAAAAAATGTTGACTCGTCTTGAGAGGGACCGGGCAGTTGGT
CAGGTGAATGGATTACAAGCGACGTTACGCAATCTTGAAACAGGTCGAAATGATCCAATT
CCACCAATAAGTGGCTACCGATCCGAAAGGGAGGTTATGAGTGATGGACCTTCCCAAATG
AAAATCCGTGAAGCTCGACAAAAAGATGTGGAACCCGGTGGTTATGATCCTTCTAAAGAT
CCAACTAAAAACAAACCAAAGAAACATCCTAAAGACAGCGTTTTCCCTGCTGATGACGGT
GTAAATCCATTTTTATCAATGGACCAATCAACCCCCACTCATTTGACTCGAACTGGTGGT
TATCGTCTTACCAACACAATAAGTGCTCATGAGCATCCTGTCAGCAACTTGACACTGCAT
CCGCGTAAGCAAATCGTTGTATCCGCATCTGATGACCATCTGTGGAAAATGTGGTCACTA
CCAGACGGCGAAATTATAATGACGGGTGATGGACATACAGATTGGTTGTCTGATTGTAAT
TTTCATCCTACAGGTACGAAGCTGGCAACAAGCAGTGGAGATGCCAGTGTTAAAATATGG
GACTTTTCAAAGGGTTCATGTGTACAAACGTTTAACGAACATACACACGCAGTTTGGGGG
GTGTCATGGCATTCTTGTGGTGATTTTGTCGCATCTTGTTCAATGGACAACACCTCCAAA
ATATGGGACATTGGCAGTGAGCGGTGTAGAGCAACATTACGAGGCCATGCTGACTCTGTC
AATAGCATTCAATTCCTACACTACTCTAATACTTTGCTAACATCGTCTGCGGATAAAACC
ATTTCATTGTGGGATGGCAGAACGGGTTTATGTGCGCAAACGTTTTATGGTCATATGCAT
TCTGTCAACCAAGCTGTGTTTAATTTAAAGGGCAGCATAGTAGCGTCATGTGATAGCTAT
GGTATGGTGAAACTGTGGGACATTAGGATGATTGCTTCAATTGCCAATGTTAACGTTGGG
CCACACCCTGCTAATCGAATTGCCTTTGATCCATCTGGTAAACTGATTGCTGTAGCAAGC
AACGATGGAACAGTGAAAATGATCGAAGTTGAAACATGTGAATTCAACTACCTGCCCGGG
CATCCAGACGCTGTTCAAGCTGTGGCATTTGACCGTGCAGGACAGTATTTACTCTCTGGA
GGGTCTGATGGAACAATCAGGATGTGGTCTTAAAGTTCCGCTTTTGTTCTTTTATTTTAC
TCACTGTACATCACCAATATTGATTGTTTTTATAATATTTAGTCTTTTATTATCACAGCT
GGGTTTTTTTTCTCAAATATAATTTATTTTTAATTTCTACCCATATTTTATTCCCTTTTA
TAATGATAAAGTGAAGGCATAAATGATTTT
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[306-444] 4.7E-35 - T[445-610] 2.6E-46 |
| SMART |
WD40_repeat (IPR001680) - T[320-359] 1.6E-4 - T[362-401] 9.1E-9 - T[404-443] 1.3E-9 - T[446-485] 2.7E-9 - T[488-527] 2.3E-4 - T[530-569] 0.2 - T[571-610] 1.5E-7 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[321-609] 2.0E-78 |
| Pfam |
WD40_repeat (IPR001680) - T[324-359] 0.19 - T[365-401] 1.5E-4 - T[405-443] 1.1E-6 - T[448-485] 5.9E-7 - T[491-527] 0.03 - T[545-567] 0.14 - T[578-610] 1.5E-6 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[327-610] 60.296 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[327-368] 12.48 - T[369-410] 14.619 - T[411-452] 12.814 - T[453-494] 14.418 - T[495-529] 9.773 - T[578-610] 16.925 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[388-402] 3.1E-7 - T[430-444] 3.1E-7 - T[597-610] 3.1E-7 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[388-402] . - T[430-444] . - T[472-486] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| POC1B_HUMAN | 29.861 % | 144 | 2.63E-37 |
| SPG16_HUMAN | 49.085 % | 615 | 0 |
| DAW1_HUMAN | 32.534 % | 158 | 9.53E-43 |