Aniseed - Transcript Card

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S264137.g06214.01.t

Possible name(s)

TUB; TULP1; TULP3

Gene model

Moocci.CG.ELv1_2.S264137.g06214

Location

S264137 [13,036 / 18,874]

Sequences

Amino acid sequence

Length: 235

>Moocci.CG.ELv1_2.S264137.g06214.01.p
MIRPRSTSVLMPPYKGIDNRPSSSGGKNIVPGLDLEDLESFAFAPAPQGFTVKCRITRDN
RGVDRHAYPTYYLHFERDDGRKIFLLAGRKRKKSKTSNYLISIDPTDLSRGGESYIGKLR
SNFMGTKFTVYDHGIGYGKPGIHVDRSNLREELASICYETNVLGFKGPRKMTVVIPGMNM
DKQRVAFKPLDDRETILSRWQNKIMDNLIELGNKTPVWNEGQLKDKNNFISDDVE

Nucleotide sequence

Length: 746

>Moocci.CG.ELv1_2.S264137.g06214.01.t
CTAAAGATAAAGCAGCTTCTTCTTCACCGAAAGCATCTATGATTCGCCCTCGTTCTACCT
CTGTTTTGATGCCTCCGTATAAGGGCATTGACAACAGACCATCCAGTAGTGGGGGTAAAA
ACATTGTTCCTGGTCTCGACCTTGAAGATTTGGAAAGTTTTGCGTTTGCACCTGCCCCGC
AGGGATTCACGGTAAAATGTCGAATCACACGTGACAATAGAGGGGTTGACCGACACGCAT
ATCCAACTTATTATTTGCACTTTGAAAGAGATGACGGTAGAAAAATATTCCTTCTTGCTG
GACGTAAACGTAAAAAGAGTAAAACATCAAACTATCTTATTTCCATCGATCCAACGGATT
TATCAAGAGGAGGAGAATCATATATTGGCAAACTTCGATCCAACTTTATGGGAACTAAGT
TCACAGTGTACGACCACGGTATAGGCTACGGTAAACCAGGAATTCATGTAGATAGAAGCA
ATTTAAGAGAAGAACTTGCCTCAATTTGTTACGAAACTAATGTATTAGGATTCAAGGGCC
CAAGAAAAATGACCGTAGTTATTCCAGGAATGAACATGGACAAACAAAGGGTCGCCTTTA
AACCTCTTGATGACCGAGAAACAATCCTATCGCGGTGGCAAAATAAAATCATGGACAATC
TAATAGAATTAGGAAATAAAACACCCGTATGGAATGAAGGTCAACTAAAAGATAAAAACA
ACTTTATCTCAGATGACGTAGAATAG

InterProScan

Gene3D	Tubby-like_C (IPR025659) - T[30-229] 8.2E-71
SUPERFAMILY	Tubby-like_C (IPR025659) - T[34-220] 3.14E-60
Pfam	Tubby_C (IPR000007) - T[45-220] 3.6E-47
PRINTS	Tubby_C (IPR000007) - T[99-115] 3.4E-38 - T[115-139] 3.4E-38 - T[150-177] 3.4E-38 - T[211-228] 3.4E-38

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TUB_HUMAN	66.667 %	285	1.3E-94
TULP3_HUMAN	62.903 %	262	2.84E-86
TULP1_HUMAN	56.316 %	237	2.36E-75