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  1. Transcript 'Moocci.CG.ELv1_2.S27...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S275408.g06570.01.t

Possible name(s)

CCT4; CCT8; CCT8L2

Location

S275408 [22,324 / 23,968]

Sequences

Amino acid sequence

Length: 547

>Moocci.CG.ELv1_2.S275408.g06570.01.p
MAFHVPKPPGLAQMLKDGAKHYNGMEEAVYRNINACKELAQTVKSAFGPHGMNKMVINHI
EKLFVTNDAATIMKELEVAHPAAKMIVLASQMCEQEVGDGTNFVVMLAGALLEHAETLLR
MGLSVPEVIEGYEQAGAKALEFLEKIVVKKIEDLRNTEEVVNSMKASIASKQYGNEDFLT
DLIAKACISVLPPNAIRFNVDNIRLIKILGGGLFSSTFVRGMMFKREVEGNITHVENAKV
AVFSCPFDMLNTETKGTVLIKNAKELMDFSKGEENLLEQQVKEIAEAGINVVVSGGKVSD
LGLHFAEKYKLLVVRLNSKWDLRRLCRTVKATALPRLTVPTAEETGHCATVRLDEISNTS
VVIFEHADAEESAVCTIALKSATENLMDDLERAVDDAVNNFKVYTKDRRLLPGAGATEIE
LAKRIEEFGESCPGLEQYSIKKFAQALEVVPKTLANNAGLNPTKIISQMYADHQSESGIN
LGVDIEEGGTLDAVEKGIFDPYLIKYWAIKLAANAAVTVLRVDQIIMAKPAGGPRAPKKK
EDWDADD

Nucleotide sequence

Length: 1,644

>Moocci.CG.ELv1_2.S275408.g06570.01.t
ATGGCATTTCACGTACCAAAGCCTCCTGGTTTAGCCCAAATGCTTAAAGATGGTGCTAAG
CATTATAATGGAATGGAAGAAGCTGTTTATAGAAATATTAATGCTTGTAAAGAATTGGCT
CAAACAGTAAAATCTGCTTTTGGCCCTCATGGTATGAATAAAATGGTAATAAATCACATT
GAAAAGTTATTTGTAACAAACGATGCGGCTACAATTATGAAGGAATTAGAAGTTGCCCAC
CCTGCAGCCAAGATGATTGTTTTGGCATCACAAATGTGTGAACAAGAAGTTGGGGATGGT
ACGAATTTTGTTGTGATGTTGGCTGGTGCATTACTAGAGCATGCCGAAACCCTTTTGAGA
ATGGGTTTGTCAGTTCCCGAAGTAATTGAAGGTTATGAACAGGCTGGTGCGAAAGCTCTT
GAATTTTTAGAAAAAATTGTAGTAAAAAAAATTGAAGATCTGCGTAATACTGAAGAAGTT
GTAAACTCAATGAAAGCTTCCATCGCAAGCAAACAATATGGAAATGAAGATTTTTTAACA
GATTTAATTGCCAAAGCTTGCATATCTGTTTTACCTCCAAATGCAATTCGTTTTAATGTA
GATAACATAAGGTTAATTAAAATTCTTGGTGGAGGTTTATTTTCTTCAACATTTGTGCGT
GGAATGATGTTTAAAAGAGAAGTTGAGGGAAACATCACCCATGTTGAAAATGCTAAAGTT
GCTGTTTTCTCATGCCCGTTTGACATGTTAAATACAGAAACAAAAGGTACAGTTTTAATA
AAAAATGCCAAAGAACTAATGGACTTCAGCAAAGGAGAAGAAAATTTATTGGAACAACAA
GTTAAAGAAATAGCTGAAGCTGGAATCAATGTAGTTGTTTCGGGTGGTAAAGTTAGTGAT
CTTGGCTTGCATTTTGCTGAAAAATATAAGCTATTGGTTGTCCGATTAAATTCCAAGTGG
GATCTGCGCAGATTGTGTAGAACTGTAAAAGCTACAGCTTTACCAAGGTTAACAGTGCCA
ACAGCTGAAGAAACTGGACATTGTGCTACTGTCCGTCTTGATGAAATTAGCAATACTAGT
GTTGTTATATTTGAGCATGCTGATGCTGAAGAAAGTGCAGTGTGTACAATTGCTTTGAAA
TCTGCAACAGAAAATTTAATGGATGATTTGGAAAGGGCGGTTGATGATGCTGTGAACAAC
TTTAAAGTGTACACAAAGGACCGAAGGCTTTTACCTGGAGCAGGTGCTACTGAAATTGAA
TTAGCTAAGAGAATTGAAGAATTTGGTGAATCCTGTCCAGGTCTGGAGCAATATTCAATT
AAAAAATTTGCACAAGCTCTTGAAGTTGTACCAAAAACATTAGCAAATAATGCTGGTCTT
AATCCGACTAAAATTATTTCCCAAATGTATGCTGATCATCAAAGTGAAAGTGGGATAAAT
CTTGGAGTGGATATTGAAGAAGGTGGCACTTTAGATGCTGTTGAAAAAGGCATATTTGAT
CCTTATTTAATAAAATACTGGGCAATTAAATTGGCAGCAAATGCAGCAGTCACTGTTCTC
CGTGTAGATCAAATTATTATGGCAAAACCAGCTGGAGGACCAAGGGCTCCAAAAAAGAAG
GAAGACTGGGATGCTGATGATTAA

InterProScan

PANTHER
Cpn60/TCP-1 (IPR002423) - T[10-540] 2.0E-247
TIGRFAM
Chap_CCT_theta (IPR012721) - T[11-539] 2.1E-233
CDD
Chap_CCT_theta (IPR012721) - T[20-529] 0.0
SUPERFAMILY
GROEL-like_equatorial_sf (IPR027413) - T[22-150] 6.67E-81 - T[408-530] 6.67E-81
Gene3D
GROEL-like_equatorial_sf (IPR027413) - T[32-148] 2.2E-161 - T[409-526] 2.2E-161
Pfam
Cpn60/TCP-1 (IPR002423) - T[39-530] 3.2E-151
PRINTS
Chaperone_TCP-1 (IPR017998) - T[41-57] 4.3E-24 - T[63-81] 4.3E-24 - T[93-112] 4.3E-24 - T[376-398] 4.3E-24 - T[410-422] 4.3E-24
ProSitePatterns
Chaperonin_TCP-1_CS (IPR002194) - T[44-56] . - T[65-81] .
Gene3D
TCP-1-like_intermed_sf (IPR027410) - T[149-219] 2.2E-161 - T[373-408] 2.2E-161
SUPERFAMILY
TCP-1-like_intermed_sf (IPR027410) - T[156-221] 5.49E-19 - T[374-408] 5.49E-19
SUPERFAMILY
GroEL-like_apical_dom_sf (IPR027409) - T[216-380] 9.42E-37
Gene3D
GroEL-like_apical_dom_sf (IPR027409) - T[220-372] 2.2E-161

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TCPQ_HUMAN 65.328 % 707 0
TCPQM_HUMAN 30.192 % 251 2.23E-76
TCPQL_HUMAN 29.981 % 252 1.08E-76





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