- Transcript 'Moocci.CG.ELv1_2.S27...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S275967.g06604.01.t
Possible name(s)
CCT3; CCT7; TCP1
Gene model
Location
S275967 [7,620 / 9,261]
Amino acid sequence
Length: 546
>Moocci.CG.ELv1_2.S275967.g06604.01.p
MNAPIIFLKEGTDTSQGIPQLVSNINACEIVSEAIRTTLGPRGMDKLIVDNRGKATISND
GATVLNLLDIVHPAGKTLVDIAKSQDAEVGDGTTTVTLLAAEFLKQVKPFIEEKIHPQVV
VRAFRKATQLAISKIKEIEVKVKKDNADEQRQMLENCASTAMNSKLVAAYKSHFAPMVVD
AVTMLDELLPLNMIGIKKISGGGLNDSKLIAGVAFKKTFSYAGFEMQRKKYKNPKIALLN
VELELKSEKENAEIRVNTVEDYQSVVDAEWSILYDKLDAICKSGAQVVLSKLPIGDVATQ
YFADRDMFCAGRVVEEDLKRTMKACGGAIQTSVQNLSESVLGTCEEFEEEQVGGERFNFF
WGCPQAKTCTILLRGGAEQFMEETERSLHDAIMIVRRALKNDAIVAGGGAIEMELSKYLR
DYARTIKGKEQMLIAAFAQALEIIPRQLCENAGFDSTNILNKLRKEHATNPKGLWYGVNI
LKEDVSDNFEEFVWEPSLIKINALTAASEAACLILSVDETIKNPRSTVDSGAAPGPGMGR
GRGRPR
Nucleotide sequence
Length: 1,641
>Moocci.CG.ELv1_2.S275967.g06604.01.t
ATGAATGCGCCTATTATATTTTTAAAAGAAGGCACAGACACTTCACAAGGAATCCCACAA
CTAGTAAGCAATATAAATGCATGTGAAATCGTATCAGAAGCCATCAGGACAACTCTTGGT
CCAAGAGGTATGGATAAACTTATAGTAGATAACCGTGGTAAAGCTACAATTTCTAATGAT
GGGGCTACAGTACTTAATTTACTGGATATTGTGCATCCTGCTGGTAAAACGCTTGTTGAC
ATAGCTAAATCACAAGATGCGGAAGTGGGTGATGGAACCACAACAGTAACTTTGCTTGCT
GCAGAATTTTTAAAGCAGGTAAAACCTTTTATTGAAGAAAAAATTCACCCACAAGTAGTT
GTTAGAGCATTCCGTAAAGCCACCCAACTTGCTATTTCTAAAATTAAAGAAATTGAAGTT
AAAGTGAAAAAGGATAATGCTGATGAACAACGACAAATGCTTGAAAATTGTGCTTCAACA
GCGATGAATTCTAAATTGGTAGCTGCTTACAAGTCTCATTTTGCACCTATGGTTGTTGAT
GCTGTAACTATGTTAGATGAGTTACTTCCACTAAACATGATTGGAATTAAAAAGATTTCC
GGTGGAGGTTTAAATGATTCAAAATTAATTGCGGGAGTTGCATTTAAAAAAACATTTTCT
TATGCAGGATTTGAAATGCAACGAAAAAAATACAAAAATCCAAAAATCGCTCTTTTAAAT
GTTGAATTAGAATTAAAATCTGAAAAAGAGAATGCTGAAATTCGGGTAAATACTGTGGAG
GATTATCAATCAGTTGTGGACGCGGAATGGTCTATCTTATATGACAAACTTGATGCTATT
TGTAAAAGTGGAGCTCAAGTAGTCTTAAGTAAACTTCCCATCGGAGATGTTGCAACTCAA
TATTTTGCAGATCGAGATATGTTTTGTGCTGGGAGAGTTGTTGAAGAAGATTTAAAAAGA
ACCATGAAAGCTTGTGGTGGTGCAATTCAGACTTCAGTTCAAAATTTGTCTGAAAGTGTT
TTGGGTACTTGTGAAGAATTTGAAGAAGAGCAAGTTGGCGGAGAGAGATTTAATTTCTTC
TGGGGTTGCCCTCAAGCAAAAACCTGCACAATATTACTTAGAGGGGGAGCGGAACAGTTC
ATGGAAGAAACTGAGAGATCTCTTCATGATGCTATTATGATTGTAAGAAGAGCTCTGAAA
AATGACGCTATTGTAGCAGGTGGTGGAGCAATTGAAATGGAGCTTAGCAAATATTTGAGA
GATTATGCTCGCACAATAAAAGGGAAAGAGCAAATGTTGATTGCTGCATTTGCTCAGGCT
TTGGAAATAATACCTCGTCAATTATGTGAAAATGCCGGTTTTGATTCAACAAATATTTTA
AACAAGCTACGAAAGGAACATGCAACAAATCCAAAAGGCCTGTGGTATGGTGTAAATATA
TTAAAAGAAGATGTCTCGGATAACTTTGAAGAGTTTGTTTGGGAACCTTCACTTATAAAA
ATAAATGCTCTTACAGCTGCTAGTGAAGCTGCTTGTTTAATTTTGTCAGTTGATGAAACA
ATAAAAAATCCACGATCAACGGTGGATTCTGGTGCAGCCCCAGGTCCAGGAATGGGAAGA
GGACGTGGTCGACCACGATAA
| TIGRFAM |
Chap_CCT_eta (IPR012720) - T[3-526] 1.2E-264 |
| CDD |
Chap_CCT_eta (IPR012720) - T[4-526] 0.0 |
| PANTHER |
Cpn60/TCP-1 (IPR002423) - T[10-527] 7.9E-211 |
| PANTHER |
Chap_CCT_eta (IPR012720) - T[10-527] 7.9E-211 |
| SUPERFAMILY |
GROEL-like_equatorial_sf (IPR027413) - T[14-142] 4.32E-86 - T[402-523] 4.32E-86 |
| Gene3D |
GROEL-like_equatorial_sf (IPR027413) - T[24-142] 1.2E-182 - T[403-521] 1.2E-182 |
| Pfam |
Cpn60/TCP-1 (IPR002423) - T[31-523] 3.0E-158 |
| PRINTS |
Chaperone_TCP-1 (IPR017998) - T[33-49] 9.4E-31 - T[55-73] 9.4E-31 - T[85-104] 9.4E-31 - T[370-392] 9.4E-31 - T[404-416] 9.4E-31 |
| ProSitePatterns |
Chaperonin_TCP-1_CS (IPR002194) - T[36-48] . - T[57-73] . - T[85-93] . |
| Gene3D |
TCP-1-like_intermed_sf (IPR027410) - T[143-211] 1.2E-182 - T[367-402] 1.2E-182 |
| SUPERFAMILY |
TCP-1-like_intermed_sf (IPR027410) - T[150-210] 7.63E-27 - T[365-401] 7.63E-27 |
| SUPERFAMILY |
GroEL-like_apical_dom_sf (IPR027409) - T[206-375] 4.71E-47 |
| Gene3D |
GroEL-like_apical_dom_sf (IPR027409) - T[212-366] 1.2E-182 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TCPA_HUMAN | 35.874 % | 309 | 1.32E-98 |
| TCPH_HUMAN | 77.674 % | 878 | 0 |
| TCPG_HUMAN | 32.482 % | 302 | 4.16E-96 |