Aniseed - Transcript Card

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S276053.g06608.01.t

Possible name(s)

PAF1

Gene model

Moocci.CG.ELv1_2.S276053.g06608

Location

S276053 [2,825 / 4,298]

Sequences

Amino acid sequence

Length: 490

>Moocci.CG.ELv1_2.S276053.g06608.01.p
MAPVPTIQNQGKRSKDSRRSKGSLIERTGLVTRVKYCNTLPDIPFDPKFIRYPFEPNRFV
EYKPTSLEKQHKIELHSDHDLGVVIDLINPDTYKIAGKNWLDPADEALLEEDLPTVSDSK
RSKQHSINVSWLRRSEYISQEFNRFGVKADKIETRIGAGIKDLFKDNDMYKDRDTQISAI
KKTFDDAKKEITKHYSKPNVYPVEVSPLYPDFKMWQHPSAQVIFDSDPAVKDKPTNEQYE
EMSQAMIRGMVDEEGDQFVAYFLPTKETIEKRKQDSVQGVDYNHEDTYDYKLAREYNWNV
KNKASKGYEENYYFVFRDDGVYYNELETRVRLSKRRAKGGGGVQSATNAILAVKHRELVE
QEVAAQEMRKLQLEPLEADEEEVEEEGENKSDAEDNQEEENKEETTEKEDEEETTQQSSD
SDEDNNENEVETDANKTVESDKDEEAESNAEEDNEDDDVKNSSGSSDEDNRQAEENEIFG
SGSDISSDSD

Nucleotide sequence

Length: 1,473

>Moocci.CG.ELv1_2.S276053.g06608.01.t
ATGGCACCTGTGCCAACAATTCAAAATCAAGGAAAACGATCTAAAGATAGTCGCCGTTCA
AAGGGTTCATTGATTGAGAGAACTGGTTTAGTCACCAGAGTTAAATATTGTAACACATTA
CCAGATATACCGTTTGATCCTAAATTTATTCGATATCCGTTTGAACCAAATCGATTTGTA
GAATATAAACCAACTTCACTTGAAAAACAACATAAGATTGAACTACATTCTGATCATGAT
TTGGGAGTTGTAATAGATTTAATAAACCCAGATACTTATAAGATTGCTGGAAAAAATTGG
CTTGATCCAGCGGATGAAGCCCTTTTAGAGGAAGACCTTCCAACAGTTTCAGATTCTAAG
CGGTCAAAACAACATAGCATAAATGTTTCTTGGTTGCGTCGAAGCGAATATATATCTCAA
GAATTTAATAGATTTGGAGTAAAAGCTGATAAAATTGAAACAAGAATTGGTGCAGGAATA
AAGGACTTATTTAAAGATAATGATATGTATAAAGATAGAGATACACAAATTTCTGCAATT
AAGAAGACATTTGATGATGCAAAGAAAGAAATCACCAAACACTACAGTAAACCTAATGTA
TATCCTGTTGAGGTATCTCCATTATATCCTGATTTTAAAATGTGGCAACATCCAAGTGCT
CAAGTCATTTTCGATTCAGATCCTGCAGTTAAAGATAAACCTACCAATGAACAATATGAA
GAGATGTCACAAGCTATGATCAGAGGTATGGTAGATGAAGAAGGGGATCAGTTTGTTGCT
TATTTTCTTCCAACTAAAGAAACCATAGAAAAGCGAAAGCAAGATAGTGTTCAGGGCGTG
GATTATAACCATGAGGACACATACGATTATAAATTAGCAAGGGAATATAACTGGAATGTT
AAAAATAAAGCTTCCAAAGGCTATGAAGAAAATTATTATTTTGTATTTCGAGATGATGGT
GTTTATTATAATGAACTTGAAACAAGAGTCAGATTAAGTAAAAGAAGAGCAAAGGGTGGA
GGTGGAGTACAGTCTGCCACAAATGCTATACTTGCTGTAAAACATAGAGAATTAGTTGAA
CAGGAAGTTGCGGCTCAAGAAATGCGAAAACTTCAACTAGAACCTCTTGAGGCTGATGAA
GAAGAAGTAGAGGAAGAAGGAGAAAACAAATCAGATGCTGAAGATAACCAGGAAGAAGAG
AATAAAGAAGAAACGACAGAAAAAGAAGATGAAGAAGAAACTACACAACAGTCTTCGGAT
TCAGATGAAGATAATAATGAAAACGAAGTAGAAACAGATGCCAACAAAACTGTTGAATCA
GACAAGGATGAAGAAGCAGAATCCAATGCAGAAGAAGATAATGAAGATGATGATGTCAAA
AACTCTAGTGGGTCATCAGATGAGGATAATAGACAAGCTGAAGAAAATGAAATCTTTGGA
AGCGGTAGTGATATTTCTTCAGACTCAGATTAA

InterProScan

PANTHER	RNA_pol_II-assoc_Paf1 (IPR007133) - T[10-420] 3.9E-145 - T[422-470] 3.9E-145
Pfam	RNA_pol_II-assoc_Paf1 (IPR007133) - T[30-432] 1.2E-143

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
PAF1_HUMAN	58.681 %	510	2.74E-178