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- Transcript 'Moocci.CG.ELv1_2.S28...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S287794.g07124.01.t
Possible name(s)
SEMA6A; SEMA6C; SEMA6D
Gene model
Location
S287794 [3,642 / 11,185]
Amino acid sequence
Length: 1,137
>Moocci.CG.ELv1_2.S287794.g07124.01.p
MILKFFVSFRAKIIMLDPSKFSATNEDSTSVVPELTYTWAADNKTKAVCAMKGQSEIAVK
PDSVDVIKRSSRDAIVQNDCDNYIRVIEATDKSGNNLLICGTNAYDPVCKKFEAQWGSDG
VLVLTADETFVLPGKEKCPFGPDQSGSSLFSGETLYSSTVTDFSGRSSVVSRSSENEEEP
SLKTSRYDTKVLNEPTFIEMRDDEDRVYVFMNEMVENDYGDVRMMSKVAQVCKNDQGGEH
VLVRQWTTFIKTRLNCSYHGYYFDQLQDVSQTMKVSTEEGVVEMMFATFTSPEFAAPASA
VCAFTIDAIRDAMQSGFKTDNNVVSSVGTLTPPTGDRHPGSCSGEKLTDTELQFIKSHPV
LEKQISGSLISTESSHRWTAIAVDSKAGPREDYTVLFVGTTEGNLIRYLSPDDKVKYGTP
ISEQDVYDTKQCGSKGNRSVMKIILHKERKVLSIAFESCVVVVPLQTCEAHLTEESCMLS
ADPYCGWDGKSCIEYTQRHQKFRQNLPFAANNPVVIVPAVPESTKDKSTVNIVEDVRFYN
DEKQSDDAEVILEKMEEDLGKDEAPNSGKDCDKNIAVAGFISSSDECVSTVLIIVISIIV
FIASGILFGFLGCYFGRRASRNPGMKNDDENVFDSKISLKAKLQKSTNIINNFSPNRNRK
NQKMNNTPSTTPLVPQKNSTSSYHESSMVKSETLNNTLLRQQNSKNRDSRYSSVSSNGPP
RYSQIRPTSRTSANVHCHSPQDTCENTLPRSVADADTLQYPDSHKKLGSRHSSPPVSIQD
LNTKKSSMNTIERRQKASDQTNEIMRDSNSIMMDTEESLKAMLNRSENNGVLDDGRTRLD
SDDSGKGDSPRNSMQTEEEKNIKSMPPPIPSPSNKPTRPHSLPTGQNKRRTRLNSEPTME
LSSPSGYHHKVSRNAPQRTNSMLVQPRLPPHYATTQRQSSQPSTPSKLKVFNPGHPQQNY
QNTNIYSTLPKNHNMMQKGPYPPHVYSKPSQNPRYVNNNNNMQPMQYDKYNMHDRFSSLP
LRSNAHRSKGNIGQAYSVQPNRNSNGSDYSNVYPAHNPVTRQSSQPSHFPTLQHTRNNTP
TSMASVPERSSTLHRRETLPSIMRQTSNQTNPVFVPLPTVPDTISSHGESLNNNVAV
Nucleotide sequence
Length: 4,081
>Moocci.CG.ELv1_2.S287794.g07124.01.t
TTAACTCAGCCAACTAAATTAACTTCAAGTATAATAATGATTTTGAAATTTTTTGTTTCG
TTTAGAGCGAAAATAATTATGTTGGATCCATCGAAATTTTCTGCAACAAACGAAGATTCA
ACATCTGTTGTTCCCGAACTGACTTACACTTGGGCAGCCGACAACAAGACTAAAGCAGTT
TGCGCAATGAAAGGACAGTCTGAGATTGCGGTTAAACCTGACAGTGTCGATGTGATTAAG
CGTTCGAGTCGTGACGCGATAGTTCAAAACGATTGTGACAATTACATTCGCGTGATCGAA
GCTACCGATAAAAGCGGCAACAATCTGTTAATTTGCGGAACAAATGCGTACGACCCAGTT
TGCAAAAAGTTTGAAGCTCAATGGGGAAGCGATGGCGTTTTAGTTTTAACAGCTGATGAA
ACTTTTGTTTTACCTGGAAAAGAGAAATGCCCATTTGGTCCTGACCAATCCGGTTCCAGT
TTGTTTTCTGGTGAAACATTGTACTCTTCCACAGTGACTGATTTTAGTGGACGCTCCTCC
GTTGTGTCACGAAGCAGCGAAAATGAAGAAGAACCATCTTTAAAAACTTCAAGATATGAC
ACCAAAGTTCTTAACGAACCTACATTTATCGAAATGAGAGATGACGAGGACCGTGTGTAC
GTTTTCATGAACGAGATGGTTGAAAACGATTATGGTGACGTCAGAATGATGTCAAAAGTG
GCACAGGTTTGCAAGAACGATCAAGGGGGTGAGCATGTATTGGTGCGACAGTGGACCACA
TTTATAAAAACTCGATTGAATTGTTCCTATCACGGTTATTATTTCGATCAACTGCAGGAT
GTTTCCCAAACCATGAAGGTATCCACAGAAGAGGGAGTAGTGGAAATGATGTTTGCTACT
TTTACATCGCCTGAGTTCGCGGCTCCGGCCTCTGCAGTTTGCGCTTTTACTATCGACGCG
ATACGTGACGCGATGCAAAGTGGGTTCAAAACCGACAATAATGTTGTTTCATCTGTCGGC
ACTCTAACCCCACCTACTGGTGATAGACATCCGGGATCTTGCTCGGGAGAAAAACTTACC
GATACCGAACTACAGTTCATCAAGTCACACCCAGTGCTAGAAAAACAGATAAGTGGAAGT
TTAATTTCAACTGAGTCCTCCCATAGATGGACGGCCATTGCAGTAGATTCTAAAGCCGGT
CCGCGCGAAGATTATACCGTGCTGTTTGTAGGCACCACCGAAGGAAATCTGATAAGATAC
CTATCACCAGATGACAAAGTAAAGTATGGAACACCCATATCGGAGCAAGATGTTTACGAC
ACTAAGCAGTGCGGTTCCAAAGGCAATAGAAGCGTAATGAAAATTATTTTGCACAAGGAA
AGAAAAGTTCTGTCGATCGCATTCGAATCTTGTGTGGTTGTAGTGCCTCTTCAAACTTGC
GAAGCTCATCTTACCGAAGAATCGTGCATGCTATCGGCAGACCCCTACTGTGGTTGGGAC
GGAAAGTCGTGTATTGAATATACTCAAAGACACCAAAAATTTCGGCAAAATTTACCATTT
GCAGCCAACAATCCGGTTGTAATTGTTCCTGCTGTACCAGAATCAACAAAAGATAAAAGC
ACAGTCAACATCGTTGAAGATGTGCGCTTTTACAATGATGAAAAACAGTCTGATGATGCA
GAGGTTATACTTGAAAAAATGGAAGAAGATTTGGGAAAAGACGAAGCACCGAATTCAGGC
AAAGATTGCGATAAAAACATCGCCGTTGCCGGTTTCATAAGCAGTTCAGATGAATGTGTG
TCGACTGTGCTCATCATTGTAATTTCTATTATCGTGTTCATAGCATCAGGTATTCTCTTT
GGTTTCCTTGGCTGCTACTTCGGTAGAAGAGCTTCTCGAAACCCGGGTATGAAAAATGAC
GATGAAAATGTGTTTGACTCAAAAATATCGCTCAAAGCTAAATTGCAAAAGTCGACGAAC
ATCATCAACAACTTTTCTCCTAACAGAAACCGAAAGAATCAAAAGATGAACAACACACCT
TCTACCACTCCTCTTGTCCCACAGAAAAACTCGACATCTAGCTACCACGAAAGCAGCATG
GTGAAATCGGAAACTTTGAACAATACTTTATTGCGTCAGCAAAATTCAAAGAACAGAGAT
TCAAGATACAGTAGCGTCAGTAGCAATGGTCCACCAAGATATTCTCAAATCCGGCCTACG
TCGCGCACATCAGCGAATGTTCATTGCCACAGCCCACAGGATACTTGCGAGAACACTTTA
CCGCGATCTGTGGCTGATGCAGACACTTTGCAATATCCTGACTCACACAAGAAACTAGGA
TCCAGACACTCGTCACCGCCTGTTTCCATTCAAGATTTGAACACCAAGAAGAGTTCAATG
AACACGATTGAGCGTAGACAGAAAGCGAGTGATCAAACCAATGAAATAATGCGGGATTCC
AACAGCATAATGATGGATACAGAAGAAAGTTTAAAAGCTATGTTGAACAGGTCCGAAAAT
AATGGAGTTCTTGATGACGGTAGAACAAGACTTGATTCAGACGACAGTGGCAAAGGCGAC
AGTCCTCGAAATTCAATGCAGACGGAGGAAGAGAAAAATATAAAGAGCATGCCTCCACCG
ATACCATCGCCATCAAACAAACCAACCCGACCACACTCGCTTCCAACAGGTCAAAATAAG
CGACGAACTCGGCTGAATTCAGAGCCGACAATGGAGTTGTCATCACCTAGCGGTTACCAC
CATAAAGTGTCTCGGAATGCACCACAAAGAACAAACTCGATGCTGGTGCAACCGCGGCTT
CCTCCACATTATGCCACAACACAGAGACAATCTTCCCAACCTTCCACACCTTCCAAACTG
AAAGTTTTCAACCCTGGTCATCCACAGCAGAATTACCAGAACACAAACATCTATTCAACT
TTACCTAAAAACCACAACATGATGCAAAAAGGACCTTACCCACCGCATGTATATTCTAAA
CCATCTCAAAACCCACGATATGTGAACAATAATAACAACATGCAACCGATGCAGTATGAC
AAGTATAACATGCACGATAGGTTTTCGAGTCTTCCATTGCGCAGCAACGCCCATAGGTCA
AAGGGCAACATTGGACAAGCATACAGCGTCCAACCAAACAGAAACAGTAACGGGAGTGAT
TATTCTAACGTGTACCCGGCACACAATCCGGTGACCAGACAAAGCTCCCAACCTTCGCAT
TTTCCAACACTGCAACACACGCGCAATAACACGCCCACATCGATGGCGTCTGTACCAGAG
AGGTCATCTACTTTGCATAGGAGGGAAACGTTGCCCTCCATAATGCGTCAAACTTCCAAC
CAAACGAACCCGGTGTTCGTTCCACTCCCAACGGTACCCGATACAATATCGTCACATGGC
GAATCTTTAAATAACAATGTTGCGGTTTAAGTTTATATATTCATATAATATTTAAAGTAA
AAATTTATAAAGTGCATACATCATAATTTAAATGTTTTAATTTTTGTGTGAAATTAGCTC
ACGCTATTGTTAAGCAATCATATAATTATTATGCTTACTTATAGCTATTTTTATTCTCTT
TTTTTTACATTAAATGTTTTTTTTTATTATTTATTTGTGCCATATTCTTTCTCTGTTTTC
AAAACTATATTCGCTTTTGTGAATTGCTTATAAATTAGATCAAAATTATATGTTCCATAG
AAAAGATTTCTATGTGAAAATTTTGTTAGTATTGGCGTCTTTTGTTTTTACAACGCACGC
GGTGTGTGGGCTTTATTTTAATGTCACTTTTGTTTATTGAAATTTGTATTTTCACGTTGA
CAAGTTCAAGTTCAAATTCGCAATGTCAAAATATTACTCGTTGAAAATTTCTTATATTAA
AAAAGAAATTAATTTTATTGTGAACACTTTACACGTTTTTTAAGGAACAATATTATATGT
TGTTTACTTTTAACTGTTTATAGATTGATCTATATAAAATTTTGAATTGTATGGTCACGT
TAAAATGTAATTTTACACTGTGTTTTTTTATATATAATAAAATGTATAATAACAATATAT
A
| ProSiteProfiles |
Semap_dom (IPR001627) - T[1-465] 74.754 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[4-469] 8.7E-95 |
| SMART |
Semap_dom (IPR001627) - T[9-442] 9.5E-58 |
| PANTHER |
Semaphorin (IPR027231) - T[32-988] 8.8E-102 |
| Pfam |
Semap_dom (IPR001627) - T[37-428] 4.9E-79 |
| SUPERFAMILY |
Semap_dom_sf (IPR036352) - T[77-471] 6.02E-84 |
| Pfam |
Plexin_repeat (IPR002165) - T[467-498] 1.9E-5 |
| SMART |
PSI (IPR016201) - T[467-513] 0.0026 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SEM6A_HUMAN | 32.377 % | 253 | 1.3E-69 |
| SEM6D_HUMAN | 31.481 % | 250 | 1.34E-68 |
| SEM6C_HUMAN | 32.869 % | 259 | 4.25E-72 |